mRNA_H-canaliculatus_F_contig12342.2001.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
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Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig12342.2001.1 vs. uniprot
Match: D7FT10_ECTSI (Trehalose 6-phosphate synthase, family GT20 / Trehalose 6-phosphate phosphatase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FT10_ECTSI) HSP 1 Score: 185 bits (470), Expect = 3.560e-52 Identity = 95/108 (87.96%), Postives = 100/108 (92.59%), Query Frame = 1
Query: 19 RRQFGEDVIDYTEVIGTSLATQDRLALFKCARVLVLTAVREGLNLIPLEYIFARGEPESPGVVLASEFSACSSLLNGAMRINPFDVAKTAGAFAQALTMSETERQGRR 342
++QFGE VIDYTEV+G L+ +RLALFKCARVLVLTAVREGLNLIPLEYIFARGEPES GVVLASEFSACSSLLNGAMRINPFDVAKTAGAFAQALTMSE ER GRR
Sbjct: 509 QQQFGEGVIDYTEVVGNDLSAPERLALFKCARVLVLTAVREGLNLIPLEYIFARGEPESAGVVLASEFSACSSLLNGAMRINPFDVAKTAGAFAQALTMSEAERSGRR 616
BLAST of mRNA_H-canaliculatus_F_contig12342.2001.1 vs. uniprot
Match: A0A835Z7K4_9STRA (Trehalose 6-phosphate phosphatase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z7K4_9STRA) HSP 1 Score: 137 bits (346), Expect = 2.070e-35 Identity = 71/105 (67.62%), Postives = 80/105 (76.19%), Query Frame = 1
Query: 28 FGEDVIDYTEVIGTSLATQDRLALFKCARVLVLTAVREGLNLIPLEYIFARGEPESPGVVLASEFSACSSLLNGAMRINPFDVAKTAGAFAQALTMSETERQGRR 342
FG +V+DY+E GT L R+AL+ C+ VL TAVREGLNL PLEYI+A +P PGVVLASEFSACSSLLNGA+RINPFDVA TA A QALTM ER GRR
Sbjct: 541 FGANVLDYSEAKGTGLPLPARMALYLCSDVLACTAVREGLNLYPLEYIYAHSDPRPPGVVLASEFSACSSLLNGAVRINPFDVAGTAAALDQALTMEGAERSGRR 645
BLAST of mRNA_H-canaliculatus_F_contig12342.2001.1 vs. uniprot
Match: A0A7S1ZKM1_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZKM1_TRICV) HSP 1 Score: 122 bits (306), Expect = 1.370e-30 Identity = 63/109 (57.80%), Postives = 84/109 (77.06%), Query Frame = 1
Query: 19 RRQFGEDVIDYTEVIGTSLATQDRLALFKCARVLVLTAVREGLNLIPLEYIFARGEPES-PGVVLASEFSACSSLLNGAMRINPFDVAKTAGAFAQALTMSETERQGRR 342
RR+FG+ +DY E+ G+SL +RLAL++ + ++V++AVREGLNL+PLEYI+AR +P S PG+ +ASEFSA S LNGA+RINPFDV TA +ALTM ER+GRR
Sbjct: 250 RRKFGDLTVDYEEIHGSSLPIVERLALWRASDLMVVSAVREGLNLLPLEYIYAREKPHSAPGITVASEFSAVCSELNGALRINPFDVPGTASVLDKALTMDPQEREGRR 358
BLAST of mRNA_H-canaliculatus_F_contig12342.2001.1 vs. uniprot
Match: A0A7R9WD76_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pseudictyota dubia TaxID=2749911 RepID=A0A7R9WD76_9STRA) HSP 1 Score: 117 bits (294), Expect = 7.980e-30 Identity = 58/107 (54.21%), Postives = 79/107 (73.83%), Query Frame = 1
Query: 22 RQFGEDVIDYTEVIGTSLATQDRLALFKCARVLVLTAVREGLNLIPLEYIFARGEPE-SPGVVLASEFSACSSLLNGAMRINPFDVAKTAGAFAQALTMSETERQGR 339
+ FG +VIDY EV GTSL RLAL+ + +++++AVREGLN++PLEY +AR +P PGV++ASEF A ++LNGAMRINPFD+ +TA +ALTM ER+ R
Sbjct: 13 KTFGPEVIDYEEVAGTSLPIDRRLALWTASEIMLISAVREGLNMLPLEYTYARAKPPLKPGVIIASEFCAVCNILNGAMRINPFDLQRTASTIDKALTMDMNERESR 119
BLAST of mRNA_H-canaliculatus_F_contig12342.2001.1 vs. uniprot
Match: A0A7S2REF4_9STRA (Hypothetical protein n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2REF4_9STRA) HSP 1 Score: 120 bits (302), Expect = 1.780e-29 Identity = 61/112 (54.46%), Postives = 82/112 (73.21%), Query Frame = 1
Query: 13 VRR--RQFGEDVIDYTEVIGTSLATQDRLALFKCARVLVLTAVREGLNLIPLEYIFARGEPESPGVVLASEFSACSSLLNGAMRINPFDVAKTAGAFAQALTMSETERQGRR 342
VRR +F VI+Y EV+G+SL RLAL+ + V++ T +REGLNL+PLEYI+AR EP PG+V+ASEF+A S+LNGA+R+NPFD+ T + +ALTM ER+GRR
Sbjct: 632 VRRITEKFSSSVINYEEVMGSSLPIDQRLALWTASDVMMTTPIREGLNLLPLEYIYARKEPAKPGIVIASEFAAVCSILNGALRVNPFDIQMTVTSIDKALTMEVEEREGRR 743
BLAST of mRNA_H-canaliculatus_F_contig12342.2001.1 vs. uniprot
Match: A0A7S3LGS2_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3LGS2_9STRA) HSP 1 Score: 120 bits (302), Expect = 1.790e-29 Identity = 64/116 (55.17%), Postives = 83/116 (71.55%), Query Frame = 1
Query: 1 VAAGVRRRQ--FGEDVIDYTEVIGTSLATQDRLALFKCARVLVLTAVREGLNLIPLEYIFARGEPESPGVVLASEFSACSSLLNGAMRINPFDVAKTAGAFAQALTMSETERQGRR 342
V A V+R Q FG DVIDY EV GTSL RLA +K +L++T +REGLN P+E+I+A EPE+PGVV+ASEFSA SS+LNGA+R+NP+D+ +AL+M ER+GRR
Sbjct: 688 VRALVKRIQEKFGNDVIDYQEVNGTSLPLDQRLAFWKAIDILMVTPIREGLNHWPMEFIYAHKEPETPGVVIASEFSAISSILNGALRVNPYDIQMMIATIDKALSMEMHEREGRR 803
BLAST of mRNA_H-canaliculatus_F_contig12342.2001.1 vs. uniprot
Match: A0A7S1ZUA6_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZUA6_TRICV) HSP 1 Score: 120 bits (301), Expect = 2.400e-29 Identity = 60/108 (55.56%), Postives = 78/108 (72.22%), Query Frame = 1
Query: 19 RRQFGEDVIDYTEVIGTSLATQDRLALFKCARVLVLTAVREGLNLIPLEYIFARGEPESPGVVLASEFSACSSLLNGAMRINPFDVAKTAGAFAQALTMSETERQGRR 342
+ FG VIDY E+I +SL RLAL+ A VLV T VREGLNL+PLEYIF+R +P +PGVV+ SEF+A SS+LNGA+R+NP+D+ + +ALTM ER+ RR
Sbjct: 397 QEHFGHSVIDYEEIICSSLPMDQRLALWSAADVLVTTPVREGLNLLPLEYIFSRRDPGTPGVVITSEFAAVSSILNGALRVNPYDIQMFVTSIDKALTMDSNEREARR 504
BLAST of mRNA_H-canaliculatus_F_contig12342.2001.1 vs. uniprot
Match: A0A1Z5K0A5_FISSO (Trehalose 6-phosphate synthase/phosphatase n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5K0A5_FISSO) HSP 1 Score: 119 bits (297), Expect = 8.430e-29 Identity = 64/116 (55.17%), Postives = 84/116 (72.41%), Query Frame = 1
Query: 1 VAAGVRRRQ--FGEDVIDYTEVIGTSLATQDRLALFKCARVLVLTAVREGLNLIPLEYIFARGEPESPGVVLASEFSACSSLLNGAMRINPFDVAKTAGAFAQALTMSETERQGRR 342
V A V+R Q FG VIDY E G++L R+AL++ + +L+ TA+REGLNL P+EYIFA EPE PGVV+ SEFSA SS+LNGA+RINP+D+ + +ALTM+ ER+GRR
Sbjct: 645 VRALVKRIQEKFGPAVIDYQEFSGSTLPMDQRMALWRASDILMSTAIREGLNLWPMEYIFAHREPEIPGVVITSEFSAVSSILNGALRINPYDIPMSIITIDKALTMTMQEREGRR 760
BLAST of mRNA_H-canaliculatus_F_contig12342.2001.1 vs. uniprot
Match: A0A8J9XAP8_PHATR (Hypothetical protein (Fragment) n=1 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=A0A8J9XAP8_PHATR) HSP 1 Score: 118 bits (296), Expect = 9.720e-29 Identity = 57/106 (53.77%), Postives = 78/106 (73.58%), Query Frame = 1
Query: 25 QFGEDVIDYTEVIGTSLATQDRLALFKCARVLVLTAVREGLNLIPLEYIFARGEPESPGVVLASEFSACSSLLNGAMRINPFDVAKTAGAFAQALTMSETERQGRR 342
+FG +VIDY E+ G+S+ RLA++K + +L+ T +REGLN P+EYI A EPE PGVV+ SEFSA SS+LNGA+R+NPFD+ T +AL+M + ER+GRR
Sbjct: 431 KFGPEVIDYVELAGSSIPMDRRLAMWKASDILMSTPIREGLNHWPMEYIHAHKEPEVPGVVITSEFSAISSILNGALRVNPFDIQMTVSTIDKALSMGQEEREGRR 536
BLAST of mRNA_H-canaliculatus_F_contig12342.2001.1 vs. uniprot
Match: B7G836_PHATC (Bifunctional trehalose-6-phosphate synthase n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7G836_PHATC) HSP 1 Score: 118 bits (296), Expect = 1.150e-28 Identity = 57/106 (53.77%), Postives = 78/106 (73.58%), Query Frame = 1
Query: 25 QFGEDVIDYTEVIGTSLATQDRLALFKCARVLVLTAVREGLNLIPLEYIFARGEPESPGVVLASEFSACSSLLNGAMRINPFDVAKTAGAFAQALTMSETERQGRR 342
+FG +VIDY E+ G+S+ RLA++K + +L+ T +REGLN P+EYI A EPE PGVV+ SEFSA SS+LNGA+R+NPFD+ T +AL+M + ER+GRR
Sbjct: 683 KFGPEVIDYVELAGSSIPMDRRLAMWKASDILMSTPIREGLNHWPMEYIHAHKEPEVPGVVITSEFSAISSILNGALRVNPFDIQMTVSTIDKALSMGQEEREGRR 788 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig12342.2001.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig12342.2001.1 >prot_H-canaliculatus_F_contig12342.2001.1 ID=prot_H-canaliculatus_F_contig12342.2001.1|Name=mRNA_H-canaliculatus_F_contig12342.2001.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=114bp VAAGVRRRQFGEDVIDYTEVIGTSLATQDRLALFKCARVLVLTAVREGLNback to top mRNA from alignment at H-canaliculatus_F_contig12342:2093..3146- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig12342.2001.1 ID=mRNA_H-canaliculatus_F_contig12342.2001.1|Name=mRNA_H-canaliculatus_F_contig12342.2001.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1054bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12342:2093..3146- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig12342:2093..3146- >mRNA_H-canaliculatus_F_contig12342.2001.1 ID=mRNA_H-canaliculatus_F_contig12342.2001.1|Name=mRNA_H-canaliculatus_F_contig12342.2001.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=684bp|location=Sequence derived from alignment at H-canaliculatus_F_contig12342:2093..3146- (Hapterophycus canaliculatus Oshoro5f female)back to top |