mRNA_H-canaliculatus_F_contig113.1166.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig113.1166.1 vs. uniprot
Match: A0A6I5X8N5_9MICO (DUF4082 domain-containing protein n=2 Tax=Tetrasphaera sp. HKS02 TaxID=1813880 RepID=A0A6I5X8N5_9MICO) HSP 1 Score: 70.5 bits (171), Expect = 6.050e-12 Identity = 39/92 (42.39%), Postives = 53/92 (57.61%), Query Frame = 1 Query: 37 PEVPTGVYGTQSGVGMAIISWEAPEDNNSTITMYEVIFSRTDLDEGGINATGSPAPTSVNVSNLITGSIYTFFVRAVNSVGSSDKSEGSDEV 312 P PTGV T +G G A++SW AP D S IT+Y V + + GSP TSV V+ L G+ YTF V A N++G+S +S S++V Sbjct: 1670 PAAPTGVSAT-AGSGSAVVSWTAPSDGGSGITLYTVTPYVGSVAQAPATVNGSPPATSVAVTGLTNGTAYTFTVSATNAIGTSPESAASNQV 1760
BLAST of mRNA_H-canaliculatus_F_contig113.1166.1 vs. uniprot
Match: A0A4Q2KRG9_9MICO (Tandem-95 repeat protein n=3 Tax=Actinomycetia TaxID=1760 RepID=A0A4Q2KRG9_9MICO) HSP 1 Score: 59.3 bits (142), Expect = 4.990e-8 Identity = 36/101 (35.64%), Postives = 52/101 (51.49%), Query Frame = 1 Query: 4 SSVTIIAAQDVPEVPTGVYGTQSGVGMAIISWEAPEDNNSTITMYEVIFSRTDLDEGGINATGSPAPTSVNVSNLITGSIYTFFVRAVNSVGSSDKSEGSD 306 +++ + AA D P PT +G A ++W AP +NNS IT Y V ++ D S A + L G+ YTF VRAVN++G+S S G+D Sbjct: 1453 ATIIVRAAPDAPNAPT----VNAGDAAATVTWRAPANNNSPITRYVVEYNGRTAD-----FPASAAGVGQRIDGLTNGTTYTFTVRAVNAIGTSAPSPGTD 1544
BLAST of mRNA_H-canaliculatus_F_contig113.1166.1 vs. uniprot
Match: A0A512DCM4_9CELL (Uncharacterized protein n=1 Tax=Cellulomonas aerilata TaxID=515326 RepID=A0A512DCM4_9CELL) HSP 1 Score: 57.0 bits (136), Expect = 3.160e-7 Identity = 39/93 (41.94%), Postives = 52/93 (55.91%), Query Frame = 1 Query: 34 VPEVPTGVYGTQSGVGMAIISWEAPEDNNSTITMYEVIFSRTDLDEGGINATGSPAPTSVNVSNLITGSIYTFFVRAVNSVGSSDKSEGSDEV 312 VP+ PT V T+ G G A +SW AP D+ S IT+Y V+ S GG AT + A T+ +V +L G YTF V A ++ G+S S S V Sbjct: 630 VPDAPTSVTATR-GSGSATVSWAAPADHGSPITLYTVVAS-----PGG--ATVTTARTTASVGSLTNGVPYTFTVTATSAAGTSPASAPSAPV 714
BLAST of mRNA_H-canaliculatus_F_contig113.1166.1 vs. uniprot
Match: UPI00145A461E (Ig-like domain-containing protein n=1 Tax=Agromyces sp. H66 TaxID=2529859 RepID=UPI00145A461E) HSP 1 Score: 55.8 bits (133), Expect = 8.230e-7 Identity = 38/100 (38.00%), Postives = 54/100 (54.00%), Query Frame = 1 Query: 10 VTIIAAQ--DVPEVPTGVYGTQSGVGMAIISWEAPEDNNSTITMYEVIF-SRTDLDEGGINATGSPAPTSVNVSNLITGSIYTFFVRAVNSVGSSDKSEG 300 VT+I D P+ PT G G A ++W+AP NN+ IT Y V + +RTD + S A + ++ L G+ YTF VRAVN +G+S+ S G Sbjct: 1469 VTVIVRDRPDQPKAPTATAGD----GYADVTWQAPAPNNAPITEYLVSYGTRTD------SFPASAAGLTQRINGLTNGTAYTFTVRAVNEIGTSEPSAG 1558
BLAST of mRNA_H-canaliculatus_F_contig113.1166.1 vs. uniprot
Match: A0A6L6ERB5_9ACTN (Uncharacterized protein n=3 Tax=root TaxID=1 RepID=A0A6L6ERB5_9ACTN) HSP 1 Score: 55.5 bits (132), Expect = 1.140e-6 Identity = 38/88 (43.18%), Postives = 45/88 (51.14%), Query Frame = 1 Query: 19 IAAQDVPEVPTGVYGTQSGVGMAIISWEAPEDNN-STITMYEVIFSRTDLDEGGINATGSPAPTSVNVSNLITGSIYTFFVRAVNSVG 279 I VP+ PT V G+ SGVG +SW AP DN S +T Y V+ GG T + A T V VS L + YTF V A N VG Sbjct: 1079 IVPASVPDAPTAVAGSISGVGSVSVSWSAPLDNGGSVVTRYSVVAF-----PGGRTCTTTGATTCV-VSGLTSAVNYTFRVSATNRVG 1160
BLAST of mRNA_H-canaliculatus_F_contig113.1166.1 vs. uniprot
Match: UPI001438AB8D (S-layer homology domain-containing protein n=1 Tax=Paenibacillus sp. HB172176 TaxID=2493690 RepID=UPI001438AB8D) HSP 1 Score: 54.7 bits (130), Expect = 1.970e-6 Identity = 40/99 (40.40%), Postives = 57/99 (57.58%), Query Frame = 1 Query: 19 IAAQDVPEVPTGVYGTQSGVGMAIISWEAP-EDNNSTITMYEVIFSRTDLDEGGINATGSPAPTSVNVSNLITGSIYTFFVRAVNSVGSSDKSEGSDEV 312 + DVPE P V SG A I++EAP +D S IT YE+ S ++L G + A + + V+ L+ GS YTF V+A+N+VGSS+ S S+ V Sbjct: 57 VTLPDVPEAPRNVVAV-SGNHRAEITFEAPLQDGGSPITGYEIFDSNSNL-VGSVGADSN----FLLVTGLVNGSSYTFTVKALNAVGSSEASAPSNAV 149
BLAST of mRNA_H-canaliculatus_F_contig113.1166.1 vs. uniprot
Match: A0A4Q9DX44_9BACL (Uncharacterized protein n=2 Tax=Paenibacillus thalictri TaxID=2527873 RepID=A0A4Q9DX44_9BACL) HSP 1 Score: 54.7 bits (130), Expect = 2.080e-6 Identity = 36/94 (38.30%), Postives = 55/94 (58.51%), Query Frame = 1 Query: 34 VPEVPTGVYGTQSGVGMAIISWEAPEDNN-STITMYEVIFSRTDLDEGGINATGSPAPTSVNVSNLITGSIYTFFVRAVNSVGSSDKSEGSDEV 312 VP+ P V T +G+G A +++ AP DN + IT Y V S G + TG+ +P + ++ L G+ YTF V+AVN++GSS+ S S+ V Sbjct: 904 VPDAPANVAAT-AGIGAATVTFTAPTDNGGNAITGYIVTAS-----PGNLTMTGTASP--IVITGLTNGTSYTFTVKAVNAIGSSEPSADSNAV 989
BLAST of mRNA_H-canaliculatus_F_contig113.1166.1 vs. uniprot
Match: A0A841SU32_9BACL (Choice-of-anchor D domain-containing protein n=4 Tax=Cohnella thailandensis TaxID=557557 RepID=A0A841SU32_9BACL) HSP 1 Score: 51.6 bits (122), Expect = 2.520e-5 Identity = 34/92 (36.96%), Postives = 50/92 (54.35%), Query Frame = 1 Query: 37 PEVPTGVYGTQSGVGMAIISWEAPEDNNSTITMYEVIFSRTDLDEGGINATGSPAPTSVNVSNLITGSIYTFFVRAVNSVGSSDKSEGSDEV 312 P P V T +G G AI+++ AP DN + V+ + GGI ATG+ +P +VN L G+ YTF V+A++ G+S +S S V Sbjct: 1095 PAAPNNVVAT-AGNGQAIVTFTAPNDNGGNVITGYVVTAMP----GGITATGTASPITVN--GLTNGTAYTFTVKALSLGGNSAESAASQPV 1179
BLAST of mRNA_H-canaliculatus_F_contig113.1166.1 vs. uniprot
Match: A0A3S1GQT5_9BACL (Uncharacterized protein n=1 Tax=Cohnella sp. AR92 TaxID=648716 RepID=A0A3S1GQT5_9BACL) HSP 1 Score: 51.2 bits (121), Expect = 3.320e-5 Identity = 39/103 (37.86%), Postives = 51/103 (49.51%), Query Frame = 1 Query: 4 SSVTIIAAQDVPEVPTGVYGTQSGVGMAIISWEAPEDNNSTITMYEVIFSRTDLDEGGINATGSPAPTSVNVSNLITGSIYTFFVRAVNSVGSSDKSEGSDEV 312 +SVT I VP PTGV +G A IS+ AP+DN S IT+Y V+ S I TG +P + V+ L G+ Y F V N G+ S S+ V Sbjct: 248 NSVTPIG---VPGAPTGVSAV-AGNKEATISFAAPDDNGSAITVYTVVSS-----PDNITVTGGSSP--IKVTGLTNGTAYKFTVTGTNGAGTGAASSASNSV 339
BLAST of mRNA_H-canaliculatus_F_contig113.1166.1 vs. uniprot
Match: UPI001FD15F1D (Ig-like domain-containing protein n=1 Tax=Agromyces sp. H17E-10 TaxID=2932244 RepID=UPI001FD15F1D) HSP 1 Score: 51.2 bits (121), Expect = 3.450e-5 Identity = 34/92 (36.96%), Postives = 48/92 (52.17%), Query Frame = 1 Query: 19 IAAQDVPEVPTGVYGTQSGVGMAIISWEAPEDNNSTITMYEVIFSRTDLDEGGINATGSPAPTSVNVSNLITGSIYTFFVRAVNSVGSSDKS 294 + +D P+ PT + G G G ++W A NNS IT Y V ++ E AT P ++ L G+ YTF VRAVN++G+SD S Sbjct: 1485 VIVRDRPDAPT-LTGLVEGDGWIDLTWRANATNNSPITGYVVSYAGK---EATFPATADGTPQ--RITQLANGTSYTFTVRAVNAIGTSDAS 1570 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig113.1166.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig113.1166.1 >prot_H-canaliculatus_F_contig113.1166.1 ID=prot_H-canaliculatus_F_contig113.1166.1|Name=mRNA_H-canaliculatus_F_contig113.1166.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=104bp LSSVTIIAAQDVPEVPTGVYGTQSGVGMAIISWEAPEDNNSTITMYEVIFback to top mRNA from alignment at H-canaliculatus_F_contig113:1112..1423- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig113.1166.1 ID=mRNA_H-canaliculatus_F_contig113.1166.1|Name=mRNA_H-canaliculatus_F_contig113.1166.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=312bp|location=Sequence derived from alignment at H-canaliculatus_F_contig113:1112..1423- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig113:1112..1423- >mRNA_H-canaliculatus_F_contig113.1166.1 ID=mRNA_H-canaliculatus_F_contig113.1166.1|Name=mRNA_H-canaliculatus_F_contig113.1166.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=624bp|location=Sequence derived from alignment at H-canaliculatus_F_contig113:1112..1423- (Hapterophycus canaliculatus Oshoro5f female)back to top |