mRNA_H-canaliculatus_F_contig10834.787.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig10834.787.1 vs. uniprot
Match: D7FLN2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FLN2_ECTSI) HSP 1 Score: 91.3 bits (225), Expect = 7.210e-18 Identity = 46/92 (50.00%), Postives = 60/92 (65.22%), Query Frame = 1 Query: 1 KAALYEKAASLVAADKAKPEAHSQFQVCTDCPADLLPFHVKAVPDLTCVTETRFAGDATLGEAWGGKHCPRWCHEEEISYVLYDFLDVRICS 276 KAALYEKA + + + + F+VCTDCPA L+P HVK VP C + AGDA +GEAWGG+ CP+WC +E + VL + DVR+CS Sbjct: 368 KAALYEKATP--STNTHRGGGNEIFEVCTDCPASLIPHHVKPVPVPVCNATSVLAGDAAVGEAWGGRGCPQWCSKEPVDGVL-NLKDVRVCS 456
BLAST of mRNA_H-canaliculatus_F_contig10834.787.1 vs. uniprot
Match: D7FXD9_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXD9_ECTSI) HSP 1 Score: 84.0 bits (206), Expect = 3.050e-15 Identity = 44/98 (44.90%), Postives = 60/98 (61.22%), Query Frame = 1 Query: 1 KAALYEKAASLVAADKA-KPEAHSQFQVCTDCPADLLPFHVKAVPDLTCVTETRFAGDATLGEAWGGKHCPRWCHEEE-ISYVLYDF--LDVRICSLE 282 KAAL+ KAA+ +K + + FQVC+DCP DL+PFHVK +PD C T GDA +GE W G+ CP WC ++ +S + +DVR CSL+ Sbjct: 438 KAALFAKAAASTDVNKQERADVGKSFQVCSDCPRDLMPFHVKPIPDPICETAESLRGDAQVGEVWNGELCPDWCMKQAPVSQLATQSGPVDVRECSLK 535
BLAST of mRNA_H-canaliculatus_F_contig10834.787.1 vs. uniprot
Match: A0A6H5K539_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K539_9PHAE) HSP 1 Score: 74.7 bits (182), Expect = 4.560e-12 Identity = 39/77 (50.65%), Postives = 45/77 (58.44%), Query Frame = 1 Query: 1 KAALYEKAA-SLVAADKAKPEAHSQFQVCTDCPADLLPFHVKAVPDLTCVTETRFAGDATLGEAWGGKHCPRWCHEE 228 KA LY KAA S K E FQVC+DCP+ LLPFHVKA+P+ C GDA GEAW G CP WC ++ Sbjct: 412 KAKLYAKAAASTDEIRKMNAEFGKAFQVCSDCPSALLPFHVKAIPESVCEIVQSLPGDAKTGEAWPGSLCPDWCMKQ 488
BLAST of mRNA_H-canaliculatus_F_contig10834.787.1 vs. uniprot
Match: D8LHZ4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHZ4_ECTSI) HSP 1 Score: 72.4 bits (176), Expect = 2.900e-11 Identity = 37/77 (48.05%), Postives = 43/77 (55.84%), Query Frame = 1 Query: 1 KAALYEKAA-SLVAADKAKPEAHSQFQVCTDCPADLLPFHVKAVPDLTCVTETRFAGDATLGEAWGGKHCPRWCHEE 228 KA LY KAA S K E FQVC+DCP+ LLPFHVKA+P+ C G A GE W G CP WC ++ Sbjct: 440 KAKLYAKAAASTDEIRKMSAEVGKSFQVCSDCPSALLPFHVKAIPESVCEIVESLPGHAKTGEVWAGSLCPDWCMKQ 516
BLAST of mRNA_H-canaliculatus_F_contig10834.787.1 vs. uniprot
Match: D7FXE0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE0_ECTSI) HSP 1 Score: 71.2 bits (173), Expect = 7.270e-11 Identity = 38/98 (38.78%), Postives = 53/98 (54.08%), Query Frame = 1 Query: 1 KAALYEKAA-SLVAADKAKPEAHSQFQVCTDCPADLLPFHVKAVPDLTCVTETRFAGDATLGEAWGGKHCPRWCHEE---EISYVLYDFLDVRICSLE 282 KA LY KAA S +++ + + FQVC+DCP +LP HVK +P+ C G+A GE W G+ CP WC ++ +DVR CS+E Sbjct: 451 KAELYAKAAASTGGSEQERADVGKSFQVCSDCPRQMLPVHVKPIPEPVCEIVESLPGNAETGEVWDGELCPDWCMKQAPVSQKETQSGPVDVRECSIE 548
BLAST of mRNA_H-canaliculatus_F_contig10834.787.1 vs. uniprot
Match: A0A6H5K8P1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8P1_9PHAE) HSP 1 Score: 71.2 bits (173), Expect = 7.570e-11 Identity = 39/98 (39.80%), Postives = 53/98 (54.08%), Query Frame = 1 Query: 1 KAALYEKAA-SLVAADKAKPEAHSQFQVCTDCPADLLPFHVKAVPDLTCVTETRFAGDATLGEAWGGKHCPRWCHEE---EISYVLYDFLDVRICSLE 282 KA L+ KAA S +++ + FQVC+DCP LLP HVK +P+ C T G+A GE W G+ CP WC ++ +DVR CS+E Sbjct: 528 KAELHAKAAASTEGSEQQSVDVGKSFQVCSDCPRQLLPAHVKPIPEPVCETVESLPGNAETGEVWDGELCPDWCMKQAPVSQKETQSGPVDVRECSME 625
BLAST of mRNA_H-canaliculatus_F_contig10834.787.1 vs. uniprot
Match: D7G348_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G348_ECTSI) HSP 1 Score: 70.5 bits (171), Expect = 1.160e-10 Identity = 36/77 (46.75%), Postives = 41/77 (53.25%), Query Frame = 1 Query: 1 KAALYEKAA-SLVAADKAKPEAHSQFQVCTDCPADLLPFHVKAVPDLTCVTETRFAGDATLGEAWGGKHCPRWCHEE 228 KA LY KAA S K E FQVC+DCP LLPFHVK +P+ C G A GE W G CP WC ++ Sbjct: 320 KAKLYAKAAASTDEIRKISAEVGKSFQVCSDCPGSLLPFHVKGIPEPVCDIVESLPGQAKTGEVWSGDLCPDWCMKQ 396
BLAST of mRNA_H-canaliculatus_F_contig10834.787.1 vs. uniprot
Match: A0A6H5KAH4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAH4_9PHAE) HSP 1 Score: 65.9 bits (159), Expect = 3.300e-10 Identity = 35/76 (46.05%), Postives = 43/76 (56.58%), Query Frame = 1 Query: 4 AALYEKAA-SLVAADKAKPEAHSQFQVCTDCPADLLPFHVKAVPDLTCVTETRFAGDATLGEAWGGKHCPRWCHEE 228 A LY KAA S K E FQVC++ P+ LLPFHV+A+P+ C GDA GEAW G CP WC ++ Sbjct: 41 AKLYAKAAASTDEIRKMNAEFGKAFQVCSEFPSALLPFHVEAIPESVCEIVESLPGDAKTGEAWPGSLCPDWCMKQ 116
BLAST of mRNA_H-canaliculatus_F_contig10834.787.1 vs. uniprot
Match: D8LJ62_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LJ62_ECTSI) HSP 1 Score: 69.3 bits (168), Expect = 3.460e-10 Identity = 31/70 (44.29%), Postives = 41/70 (58.57%), Query Frame = 1 Query: 73 FQVCTDCPADLLPFHVKAVPDLTCVTETRFAGDATLGEAWGGKHCPRWCHEEEISYVLYD---FLDVRIC 273 F++CTDCPA L+P HVK P L C T + G+AT+G+AW + CP WC E +DVR+C Sbjct: 555 FELCTDCPATLIPLHVKPSPLLKCDTVSALPGNATVGKAWDDERCPDWCMAREPDRQASKGTGLVDVRVC 624
BLAST of mRNA_H-canaliculatus_F_contig10834.787.1 vs. uniprot
Match: A0A2G8LPS5_STIJA (Uncharacterized protein n=1 Tax=Stichopus japonicus TaxID=307972 RepID=A0A2G8LPS5_STIJA) HSP 1 Score: 57.0 bits (136), Expect = 5.000e-6 Identity = 26/51 (50.98%), Postives = 31/51 (60.78%), Query Frame = 1 Query: 70 QFQVCTDCPADLLPFHVKAVPDLTC-VTETRFAGDATLGEAWGGKHCPRWC 219 Q +VC DCPA LLPFH+K +PDLTC V+E+ E W G CP C Sbjct: 410 QLKVCQDCPASLLPFHIKPIPDLTCYVSESVRETSLVKQEVWDGTLCPAEC 460 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10834.787.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig10834.787.1 >prot_H-canaliculatus_F_contig10834.787.1 ID=prot_H-canaliculatus_F_contig10834.787.1|Name=mRNA_H-canaliculatus_F_contig10834.787.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=99bp KAALYEKAASLVAADKAKPEAHSQFQVCTDCPADLLPFHVKAVPDLTCVTback to top mRNA from alignment at H-canaliculatus_F_contig10834:887..1747- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig10834.787.1 ID=mRNA_H-canaliculatus_F_contig10834.787.1|Name=mRNA_H-canaliculatus_F_contig10834.787.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=861bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10834:887..1747- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10834:887..1747- >mRNA_H-canaliculatus_F_contig10834.787.1 ID=mRNA_H-canaliculatus_F_contig10834.787.1|Name=mRNA_H-canaliculatus_F_contig10834.787.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=594bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10834:887..1747- (Hapterophycus canaliculatus Oshoro5f female)back to top |