mRNA_H-canaliculatus_F_contig10698.666.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig10698.666.1 vs. uniprot
Match: D8LP49_ECTSI (EsV-1-210/211 paralog n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LP49_ECTSI) HSP 1 Score: 353 bits (907), Expect = 1.870e-118 Identity = 182/273 (66.67%), Postives = 219/273 (80.22%), Query Frame = 1 Query: 1 MDLMVRMASSTIRVDKDTKTGSVIETIRLVLGGDSSAAKTCFRRLILAYPDLGSRCPQLRINGKGKETPVADAKTLIEIVWLLPGKKAREFRRQSSEEVCRLLGGDLGLVSEMEARHAALQSTEEGRATRDFLVHGREEGVGTCDGTPAGFKYLSEADGAQFAKQVIEQNLKLGEHQLQESKVALKRKRIEDLVQSYRELKGLGVHLGGRTLVELRDNVTILSRQDVIVKNAMAVAAPLTQDSRTPTHELDADHRGRETGIVILSNKIGIRVP 819 MDL+ M +TIR DK TK GSV++TIR+VL DSS A T F RL+ A+P+LGSRC + ++NGKG ETPVADAKTLIEIVWLLPGKKA FRRQSSE+VCRLLGGDL LVSE+EARHA LQSTE+GR T++FL+HGREE V T DG PAGFKYLSE D AQ AK++I+Q LK G+ ALKRKR++DLV SYR ++ +GV L GRTL+ELRD+VTILSRQ+ + +A+AVA PL QDS T THEL + RG+ETGIV++S+KIGIRVP Sbjct: 1 MDLIESMDGATIRADKQTKKGSVMDTIRMVLRCDSSNANTAFGRLLQAHPELGSRCTRSKLNGKGNETPVADAKTLIEIVWLLPGKKAHSFRRQSSEKVCRLLGGDLSLVSEIEARHATLQSTEQGRETQEFLLHGREEAVETFDGMPAGFKYLSETDRAQVAKRMIDQQLKAGDQ-------ALKRKRVDDLVHSYRAIQDIGVRLDGRTLIELRDSVTILSRQNTVEDDAVAVATPLLQDSNTSTHELASAQRGKETGIVVVSSKIGIRVP 266
BLAST of mRNA_H-canaliculatus_F_contig10698.666.1 vs. uniprot
Match: A0A6H5JW74_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JW74_9PHAE) HSP 1 Score: 378 bits (971), Expect = 3.480e-118 Identity = 198/273 (72.53%), Postives = 229/273 (83.88%), Query Frame = 1 Query: 1 MDLMVRMASSTIRVDKDTKTGSVIETIRLVLGGDSSAAKTCFRRLILAYPDLGSRCPQLRINGKGKETPVADAKTLIEIVWLLPGKKAREFRRQSSEEVCRLLGGDLGLVSEMEARHAALQSTEEGRATRDFLVHGREEGVGTCDGTPAGFKYLSEADGAQFAKQVIEQNLKLGEHQLQESKVALKRKRIEDLVQSYRELKGLGVHLGGRTLVELRDNVTILSRQDVIVKNAMAVAAPLTQDSRTPTHELDADHRGRETGIVILSNKIGIRVP 819 MDL+ M +TIRVDK+ + GSVI+TIR+VLGGDSSAA T RLILA +LG+RC QLRINGKGK TPVADAKTLIEIVWLLPGKKAREFRRQSSE+VCRLLGGDL LVSE+EARHA LQSTE+GRAT++FL+ REE V T DG PAGF+YL D AQFAKQ++E NL++ SKVALKRKR++D+VQSYR L+ LGV L GRTL+ELRDNVTILSRQDV+V NA+A+AAPL DS TPTHEL AD RG+ETGIV++S+KIGIRVP Sbjct: 898 MDLIENMHGATIRVDKNEQVGSVIDTIRMVLGGDSSAANTSLNRLILANEELGTRCTQLRINGKGKFTPVADAKTLIEIVWLLPGKKAREFRRQSSEKVCRLLGGDLSLVSEIEARHATLQSTEQGRATQEFLLGEREEAVETFDGMPAGFRYLPVEDRAQFAKQMLELNLEM-------SKVALKRKRVDDMVQSYRALQDLGVLLDGRTLIELRDNVTILSRQDVMVNNAVAIAAPLLHDSTTPTHELGADQRGKETGIVVVSSKIGIRVP 1163
BLAST of mRNA_H-canaliculatus_F_contig10698.666.1 vs. uniprot
Match: B5LWG1_9PHYC (Uncharacterized protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWG1_9PHYC) HSP 1 Score: 229 bits (583), Expect = 2.830e-69 Identity = 132/287 (45.99%), Postives = 185/287 (64.46%), Query Frame = 1 Query: 1 MDLMVRMASS-TIRVDKDTKTGSVIETIRLVLGGDSSAAKTCFRRLILAYPDLGSRCPQLRINGKGKETPVADAKTLIEIVWLLPGKKAREFRRQSSEEVCRLLGGDLGLVSEMEARHAALQSTEEGRATRDFLVH-GREEGVGTC----------DGTPAGFKYLSEADGAQFAKQVIEQNLKLGEHQLQESKVALKRKRIEDLVQSYRELKGLGVHLGGRTLVELRDNVTILSRQDVIVKNAM--AVAAPLTQDSRTPTHELDADHRGRETGIVILSNKIGIRVP 819 MD +V + +IR D TK GSVI+ IR VLG SSAA T L + DLG+ +INGKGK TPVADAKTL+EI++LLPG+KA +FRR+S+E+VCRL+GGD+ LV E+E R AL+ST EGRAT+ FL++ G E + +G PAGF +L +D + AK+V++Q L + KR+R ED+V Y+ L +GV L RT +E+RDNV++L+++D+ ++ + + AP+ D TPTH L A RG ETGIV+++ K+G+RVP Sbjct: 1 MDAIVGYTDNFSIRADATTKKGSVIDVIRSVLGCSSSAANTNLSNLKTRFSDLGNNIAHAQINGKGKSTPVADAKTLVEIIFLLPGQKACKFRRKSAEKVCRLMGGDMSLVVEIEQRCTALESTPEGRATQAFLLNPGSSENSSSAPCASAQLKKYEGMPAGFSFLDPSDQCKVAKEVVQQALDGRKXXXXXXXXXXKRQRCEDMVGRYKTLMDIGVKLDDRTKIEIRDNVSLLTKRDLALEGSQDTEICAPI--DPTTPTHTLCAGERGHETGIVVVAAKMGVRVP 285
BLAST of mRNA_H-canaliculatus_F_contig10698.666.1 vs. uniprot
Match: B5LWM3_9PHYC (Uncharacterized protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWM3_9PHYC) HSP 1 Score: 226 bits (577), Expect = 1.210e-68 Identity = 124/272 (45.59%), Postives = 180/272 (66.18%), Query Frame = 1 Query: 19 MASSTIRVDKDTKTGSVIETIRLVLGGDSSAAKTCFRRL----ILAYPDLGSRCPQLRINGKGKETPVADAKTLIEIVWLLPGKKAREFRRQSSEEVCRLLGGDLGLVSEMEARHAALQSTEEGRATRDFLV-HGREEGVGTCDGTPAGFKYLSEADGAQFAKQVIEQNLKLGEHQLQESKVALKRKRIEDLVQSYRELKGLGVHLGGRTLVELRDNVTILSRQDVIVKNAMAVAAPLTQDSRTPTHELDADHRGRETGIVILSNKIGIRVP 819 + ++TIR+D T+ GSVI+ IR+VL D+S+A T FRRL + + + G+ C LRINGKG+ TPVA+AKTL+EI++ LPGK AREFRR+S+ ++CRLLGGD LV E+E R A L+ST +GR T+ FL+ R + G P GF+YL E+ A +V+ +ALKR+RIED++ SY L+ LGV L RT+VE+RDNV++L+++ + ++ L D +TPTH L + RG E+GIV++++K+G+RVP Sbjct: 8 VVNATIRIDNATQKGSVIDVIRMVLRCDASSANTAFRRLKDDMLKSRAEFGAACSHLRINGKGRLTPVANAKTLVEIIFSLPGKLAREFRRKSASQICRLLGGDPTLVFEIEQRRAELESTPKGRVTQAFLLGESRHDTDDDFTGMPVGFRYLEESQRRAVAGEVVA--------------LALKRQRIEDMIGSYASLRSLGVELDPRTMVEIRDNVSLLTKRKLSIEEREDSTTRLV-DPKTPTHVLGREERGNESGIVVVASKMGVRVP 264
BLAST of mRNA_H-canaliculatus_F_contig10698.666.1 vs. uniprot
Match: UPI0000161E55 (EsV-1-210/211 paralog n=1 Tax=Ectocarpus siliculosus virus 1 TaxID=37665 RepID=UPI0000161E55) HSP 1 Score: 192 bits (488), Expect = 1.250e-56 Identity = 106/208 (50.96%), Postives = 141/208 (67.79%), Query Frame = 1 Query: 319 LGLVSEMEARHAALQSTEEGRATRDFLVHGREE--GVGTCDGTPAGFKYLSEADGAQFAKQVIEQNLKLGEHQLQESKVALKRKRIEDLVQSYRELKGLGVHLGGRTLVELRDNVTILSRQDVIVKNAMAVAAPLTQDSRTPTHELDADHRGRETGIVILSNKIGIRVP*KNVWSCR*TDEKIVHHQVRPCSRLQSLHEETDAFYGTP 936 + LVSE+EARH +LQSTEEGRAT+ FL+ GREE + + +G P FKY+ D AK++IEQ QLQES VALKR+R+++L+QSY+ L+ +GV+L GRTL+EL DNVTILSRQD++V +A+ PL QDS TPTHELDA RGRETGIV++S KIG+RVP + +K+ + R S ++ + F G P Sbjct: 1 MSLVSEIEARHNSLQSTEEGRATQSFLLDGREEVEAIDSFEGMPPAFKYIDAKDRGDLAKRMIEQ-------QLQESTVALKRQRVDNLIQSYKSLRDIGVNLDGRTLIELCDNVTILSRQDLVVSDAVPTPTPLLQDSSTPTHELDAAQRGRETGIVVVSAKIGLRVPQHLCGTVGKLMKKLYIKKYRLSSNFKAFIKRETIFNGRP 201
BLAST of mRNA_H-canaliculatus_F_contig10698.666.1 vs. uniprot
Match: B5LWF8_9PHYC (Uncharacterized protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWF8_9PHYC) HSP 1 Score: 191 bits (484), Expect = 7.910e-56 Identity = 109/244 (44.67%), Postives = 157/244 (64.34%), Query Frame = 1 Query: 1 MDLMVR-MASSTIRVDKDTKTGSVIETIRLVLGGDSSAAKTCFRRLILAYPDLGSRCPQLRINGKGKETPVADAKTLIEIVWLLPGKKAREFRRQSSEEVCRLLGGDLGLVSEMEARHAALQSTEEGRATRDFLV-----------HGREEGVGTCDGTPAGFKYLSEADGAQFAKQVIEQNLKLGEHQLQESKVALKRKRIEDLVQSYRELKGLGVHLGGRTLVELRDNVTILSRQDVIVKNA 696 MD++VR M SS+IRVDK +K GSVI+T+++VLG SS+ T RRL +PDL +LRINGKG TPVADAK L+++V LLPG+KA EFRR+S++ VCRLLGGD+ LV E+E R A LQ + EGR +D L+ + +G PAGF++L +D + AK+V++Q L K ALKR+R ED+V + L +GV L +T ++RDN+++L++ D+ ++ + Sbjct: 1 MDVIVRNMESSSIRVDKASKKGSVIDTVKMVLGCTSSSGNTNLRRLTTRFPDLCVDITRLRINGKGMATPVADAKLLVQVVLLLPGQKAIEFRRKSADVVCRLLGGDMSLVKEIEQRCATLQRSPEGRVIQDILLGDGDADRSVVTSSTSSQIDKYEGMPAGFRFLDASDQHRVAKEVVKQALDC-------KKQALKRRRCEDMVDQCKSLSDIGVDLDNQTKKDIRDNLSLLTKGDLALEGS 237
BLAST of mRNA_H-canaliculatus_F_contig10698.666.1 vs. uniprot
Match: B5LWM4_9PHYC (Uncharacterized protein n=1 Tax=Feldmannia species virus TaxID=39420 RepID=B5LWM4_9PHYC) HSP 1 Score: 179 bits (454), Expect = 1.030e-49 Identity = 120/287 (41.81%), Postives = 165/287 (57.49%), Query Frame = 1 Query: 1 MDLMVRMASSTIRVDKDTKTGSVIETIRLVLGGDSSAAKTCFRRLILAYPDLGSRCPQLRINGKGKETPVADAKTLIEIVWLLPGKKAREFRRQSSEEVCRLLGGDLGLVSEMEARHAALQSTEEGRATRDFLVHGREEGVGTCDGT--------PAGFKYLSEADGAQFAKQVIEQNLKLGEHQLQESKVALKRKRIEDLVQ-SYRELKGLG--VHLGGRTLVELRDNVTILSRQDVIVKNAMAVAAPLTQDSRT----PTHELDADHRGRETGIVILSNKIGIRV 816 MDL+ M STIRVDK+TK GSVI+TIR+VL DSS A T RL+L++P LG + QL++NG+GK TPVADAKTLIEIVWLLPG++A FR Q ++CRLLGGD LVSE+EARHA L TEEGRAT++F ++ + D P+ FK + + FA ++ + + E ++ + A ++E + Q + R++ G V R + + +T D +V +A+A T DS T T E RG ET I + K+GI V Sbjct: 19 MDLIESMDGSTIRVDKNTKLGSVIDTIRMVLECDSSNANTSLGRLVLSHPGLGEKYTQLKVNGRGKPTPVADAKTLIEIVWLLPGRRAHAFRCQRVGKICRLLGGDTSLVSEIEARHATLTGTEEGRATQEFFLNDNHVTIDQPDQVKELRSGEEPSWFKNATAEEKRAFASTMVNKAIVSEEVEMYDFCKA----KLESVGQFTTRDMIEFGDRVRDAQRRALRAGNMMTSTPVDDTVVISAVARPVDDTIDSATGLPLATPECSESVRGVETSICNEAAKLGICV 301
BLAST of mRNA_H-canaliculatus_F_contig10698.666.1 vs. uniprot
Match: Q6XM54_9PHYC (FirrV-1-A33 n=1 Tax=Feldmannia irregularis virus a TaxID=231992 RepID=Q6XM54_9PHYC) HSP 1 Score: 175 bits (444), Expect = 1.740e-47 Identity = 107/282 (37.94%), Postives = 162/282 (57.45%), Query Frame = 1 Query: 34 IRVDKDTKTGSVIETIRLV----------------LGGDSSAAKTCFRRLILAYP-DLGSRCPQLRINGKGKETPVADAKTLIEIVWLLPGKKAREFRRQSSEEVCRLLGGDLGLVSEMEARHAALQSTEEGRATRDFLVHGREEGVGTCDGTPAGFKYLSEADGAQFAKQVIEQNLKLGEHQLQESKVALKRKRIEDLVQSYRELKGLGVHLGGRTLVELRDNVTILSRQDVIVKNAMAVAAP---LTQDSRTPTHELDADHRGRETGIVILSNKIGIRVP 819 IRVD++++ GSVI+ I+L+ + D F+ P L R +++ING+G+ TPVADAKTLI I+WLLPG+ FR QS+E + R+LGGDL L E++ + A LQ T EGRA +DF+ ++ F++L + + A+Q + LK + + Q + LK+K I D++ Y+ LK + V + RT VE+RD V+IL+RQ ++ + A+P L +D TPTH LDA+ RG+ET IV++S K+ +RVP Sbjct: 122 IRVDEESRMGSVIDVIKLICPEKSEFHAYKTLSNLIDDDDKCIGNKFKSDDSTIPLRLSERVKKIQINGRGRVTPVADAKTLIYIIWLLPGRAVAHFRAQSAEIIARVLGGDLRLAQEIQQQCAKLQETPEGRAFQDFMAPDAKKQKMDM------FEFLGPSKRVEIAEQFYAEKLKAIQQERQAKEQELKKKSITDIIDVYQSLKNIDVEIDDRTKVEIRDKVSILTRQ---MEGQGSHASPPLLLCEDPSTPTHVLDAERRGQETNIVVVSAKMNVRVP 394
BLAST of mRNA_H-canaliculatus_F_contig10698.666.1 vs. uniprot
Match: A0A835Z3L4_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3L4_9STRA) HSP 1 Score: 167 bits (422), Expect = 1.360e-45 Identity = 106/270 (39.26%), Postives = 151/270 (55.93%), Query Frame = 1 Query: 25 SSTIRVDKDTKTGSVIETIRLVLGGDSSAAKTCFRRLILAY-PDLGSRCPQLRINGKGKETPVADAKTLIEIVWLLPGKKAREFRRQSSEEVCRLLGGDLGLVSEMEARHAALQSTEEGRATRDFLVHGREEGVG--TCDGTPAGFKYLSEADGAQFAKQVIEQNLKLGEHQLQESKVALKRKRIEDLVQSYRELKGLGVHLGGRTLVELRDNV--TILSRQDVIVKNAMAVAAPLTQDSRTPTHELDADHRGRETGIVILSNKIGIRVP 819 ++ IRVD T GSVI+ I++V ++S A T +RL+ DLG+RC QLRIN KG+ TP ADAKTL+EIVW LPGK AREFRRQS+ VCR+LGGDL +V E+EARH ALQ TE GRA + FL+ E VG G P +E + + + + + E+ +A K+ R + V+ Y L+ +G R + D V + V A A+AA D PT + D +RG E + +++++ +++P Sbjct: 7 TAAIRVDTATNKGSVIDVIKIVQSCNASDASTYCKRLLDDIGTDLGTRCVQLRINSKGRLTPCADAKTLVEIVWSLPGKAAREFRRQSAANVCRVLGGDLSIVQEVEARHHALQQTEGGRAAQKFLLEDSESSVGGEMISGLPLELALANETQKSAYFEARMRE----------EAAIATKKARAQFAVEGYELLRSMGA-ADHRDCITFSDAVRRAVTDGGGAAVVEARALAA---DDPTIPTPQCDPFYRGEEISMHTVAHEMRVKIP 262
BLAST of mRNA_H-canaliculatus_F_contig10698.666.1 vs. uniprot
Match: A0A835YWG0_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWG0_9STRA) HSP 1 Score: 161 bits (407), Expect = 2.590e-43 Identity = 111/270 (41.11%), Postives = 150/270 (55.56%), Query Frame = 1 Query: 25 SSTIRVDKDTKTGSVIETIRLVLGGDSSAAKT-CFRRLILAYPDLGSRCPQLRINGKGKETPVADAKTLIEIVWLLPGKKAREFRRQSSEEVCRLLGGDLGLVSEMEARHAALQSTEEGRATRDFLVHGREEGVGTCDGTPAGFKYLSEADGAQFAKQVIEQNLKLGEHQLQESK----VALKRKRIEDLVQSYRELKGLGVHLGGRTLVELRDNVTILSRQDVIVKNAMAVAAPLTQDSRT-PTHELDADHRGRETGIVILSNKIGIRV 816 ++ IRVD T GSVI+ I++V ++S A T C R L +G+RC QLRINGKGK T ADAKTL+EIVW LPGK AREFRR S++ VCR+LGGDL +V E+EARH ALQST GRA +DFL+ G PA + L+ G +V+ +N K E L + +A K+ E V SY L+ +G R + D V + + A+ A + D T PT + DA +RG E + +S+K +R+ Sbjct: 7 TAAIRVDTATNKGSVIDVIKIVQSCNASDASTYCKRLLDDVGTHIGTRCTQLRINGKGKLTFCADAKTLVEIVWSLPGKAAREFRRTSAKTVCRVLGGDLSIVREVEARHHALQSTGGGRAAQDFLLGDESSG----SEAPAEERTLARTIG-----EVMRRNNKQAELDLSRMRDNASIATKKACAEFAVDSYEMLRSMGA-ADDRDRITFSDAVRRIVAEGGGAAGAIVEAGAVPADDPTVPTSDCDAYYRGEEISMHSVSSKYSLRI 266 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10698.666.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig10698.666.1 >prot_H-canaliculatus_F_contig10698.666.1 ID=prot_H-canaliculatus_F_contig10698.666.1|Name=mRNA_H-canaliculatus_F_contig10698.666.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=274bp MDLMVRMASSTIRVDKDTKTGSVIETIRLVLGGDSSAAKTCFRRLILAYPback to top mRNA from alignment at H-canaliculatus_F_contig10698:1270..2272- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig10698.666.1 ID=mRNA_H-canaliculatus_F_contig10698.666.1|Name=mRNA_H-canaliculatus_F_contig10698.666.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1003bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10698:1270..2272- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10698:1270..2272- >mRNA_H-canaliculatus_F_contig10698.666.1 ID=mRNA_H-canaliculatus_F_contig10698.666.1|Name=mRNA_H-canaliculatus_F_contig10698.666.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1644bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10698:1270..2272- (Hapterophycus canaliculatus Oshoro5f female)back to top |