mRNA_H-canaliculatus_F_contig10681.652.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-canaliculatus_F_contig10681.652.1
Unique NamemRNA_H-canaliculatus_F_contig10681.652.1
TypemRNA
OrganismHapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)
Homology
BLAST of mRNA_H-canaliculatus_F_contig10681.652.1 vs. uniprot
Match: D7FVG0_ECTSI (Centaurin, beta 5, isoform CRA_a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVG0_ECTSI)

HSP 1 Score: 313 bits (802), Expect = 1.950e-99
Identity = 171/273 (62.64%), Postives = 200/273 (73.26%), Query Frame = 1
Query:    1 ASGEWDWQLPSGSAWPSSATAT-ATPSEMGSGAGGSTAGFTSSATGNDYFVALNKAQLTRLLEASEQKKKNYGSRGANPECVDCGAPDPDWSSISLGVMMCIECSGIHRSMGVHVSKVRSLTLDRWTEPLVELLLEAGNRNANRVWEASRD-SPCFSQMKAKMRPDSDRSTREAFIRSKYEQRRFLDPPHVPSPEASLSSSRLLFDACGSGDMLGALWCMAHGADVNWANPDAGGCTCAHEAARRSRVALLELLANNGCNLGALTDKQVLTAT 813
            AS +WDWQ P+ S    + T T A         GG+  G    A   D  ++LNKAQLT L EA             NPECVDCGA +PDWSSI+LGVMMCIECSGIHRSMGVHVSKVRSLTLDRWT PLVELLL+AGN NAN VWEA RD +P FS MKAK+ P++DR++RE FIR+KYE+RRF+DPPH  SPE +LSSSRLLFDAC  G+ML A+WC+AHGADVNW +   GG T AHEAAR SRVALLELLANNGC+L A ++ +  ++T
Sbjct:  382 ASADWDWQSPNSSISTGTFTLTGAXXXXXXXDKGGAAGGGAELAMPAD--MSLNKAQLTSLWEA-------------NPECVDCGAREPDWSSINLGVMMCIECSGIHRSMGVHVSKVRSLTLDRWTTPLVELLLKAGNHNANEVWEAHRDGNPAFSAMKAKLYPEADRASREEFIRAKYEKRRFVDPPHDTSPEVALSSSRLLFDACKEGNMLEAMWCLAHGADVNWTDTTGGGYTAAHEAARGSRVALLELLANNGCDLSATSENKCNSST 639          
BLAST of mRNA_H-canaliculatus_F_contig10681.652.1 vs. uniprot
Match: A0A6H5L2J8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2J8_9PHAE)

HSP 1 Score: 317 bits (811), Expect = 6.260e-98
Identity = 159/218 (72.94%), Postives = 180/218 (82.57%), Query Frame = 1
Query:  148 VALNKAQLTRLLEASEQKKKNYGSRGANPECVDCGAPDPDWSSISLGVMMCIECSGIHRSMGVHVSKVRSLTLDRWTEPLVELLLEAGNRNANRVWEASRD-SPCFSQMKAKMRPDSDRSTREAFIRSKYEQRRFLDPPHVPSPEASLSSSRLLFDACGSGDMLGALWCMAHGADVNWANPDAGGCTCAHEAARRSRVALLELLANNGCNLGALTDKQ 798
            ++LNKAQLT L EAS           ANPECVDCGA +PDWSSI+LGVMMCIECSGIHRSMGVHVSKVRSLTLDRWT PLVELL EAGN NAN VWEA RD +P FS MKAK+ P++DR++REAFIR+KYEQRRF+DPPH  SPEA+LSSSRLLFDAC  G+M+ A+WC+AHGADVNW N   GG T AHEAAR SRVALLELLANNGC+L A ++ +
Sbjct:  687 MSLNKAQLTSLWEAS----------AANPECVDCGAREPDWSSINLGVMMCIECSGIHRSMGVHVSKVRSLTLDRWTTPLVELLREAGNHNANEVWEAHRDGNPAFSAMKAKLYPEADRASREAFIRAKYEQRRFIDPPHDASPEAALSSSRLLFDACKEGNMVEAMWCLAHGADVNWTNTAEGGYTAAHEAARGSRVALLELLANNGCDLSATSENK 894          
BLAST of mRNA_H-canaliculatus_F_contig10681.652.1 vs. uniprot
Match: A0A835ZCL2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCL2_9STRA)

HSP 1 Score: 190 bits (483), Expect = 2.450e-51
Identity = 103/193 (53.37%), Postives = 130/193 (67.36%), Query Frame = 1
Query:  226 ANPECVDCGAPDPDWSSISLGVMMCIECSGIHRSMGVHVSKVRSLTLDRWTEPLVELLLEA-GNRNANRVWEASRDSPCFSQMKAKMRPDSDRSTREAFIRSKYEQRRFLDPPHVPSPEASLSSSRLLFDACGSGDMLGALWCMAHGADVNWANPDAGGCTCAHEAARRSRVALLELLANNGCNLGALTDKQV 801
            ANP+CVDCGA  PDW+SISLGV+MCIECSGIHRSMGVH+SKVRSL LDRWT  L+  L+E+ GN   N VWEA       S+ + ++ PDSDR+ RE+FIR KY  R F+ P   P      +++R L+ A  +G+M   L  +AHGAD+NWAN      T AH+A R  ++A+LELL+ NG  L AL D  V
Sbjct:  933 ANPQCVDCGAATPDWASISLGVLMCIECSGIHRSMGVHISKVRSLMLDRWTPSLLLQLMESVGNTTFNAVWEAD-----MSESQPRLAPDSDRTARESFIRRKYMMRAFIGPRLGPD-----AANRELYAAAKTGEMQRVLTAIAHGADLNWANEQEHMSTPAHQAVRGGQLAVLELLSQNGAALDALQDDDV 1115          
BLAST of mRNA_H-canaliculatus_F_contig10681.652.1 vs. uniprot
Match: W7T4W5_9STRA (Ankyrin repeat-containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T4W5_9STRA)

HSP 1 Score: 147 bits (370), Expect = 1.760e-38
Identity = 87/197 (44.16%), Postives = 112/197 (56.85%), Query Frame = 1
Query:  220 RGANPECVDCGAPDPDWSSISLGVMMCIECSGIHRSMGVHVSKVRSLTLDRWTEPLVELLLEAGNRNANRVWEASRDSPCFSQMKAKMRPDSDRSTREAFIRSKYEQRRFLDPPHVPSPEAS-----LSSSRLLFDACGSGDMLGALWCMAHGADVNWANPDAGGCTCAHEAARRSR-VALLELLANNGCNLGALTD 792
            R ANP C DC  P+PDW+S+S G +MCIECSGIHRS+GVHVSKVRSL LD W   L E++   GN  AN+VWEA    PC  +   K   ++ R  REA+IR KY ++ FL P      EA         + +L+ A   GD+    W +AHGADVN+AN      T  H   +R + +A L  L  NG  +  + D
Sbjct:   84 REANPVCADCQRPEPDWASVSFGTVMCIECSGIHRSLGVHVSKVRSLLLDAWPRSLREVMEAMGNLRANQVWEAR--VPCDLE---KPGVEAPREVREAWIRDKYVRKAFLGPSRRTEKEADGVKGQEEPNAVLYAAAIQGDLAKMGWALAHGADVNFANGKERRRTPVHAVCQRGQSLAALAFLVLNGGAVDVVDD 275          
BLAST of mRNA_H-canaliculatus_F_contig10681.652.1 vs. uniprot
Match: A0A7R9YAC1_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YAC1_9STRA)

HSP 1 Score: 150 bits (379), Expect = 1.840e-37
Identity = 86/189 (45.50%), Postives = 111/189 (58.73%), Query Frame = 1
Query:  226 ANPECVDCGAPDPDWSSISLGVMMCIECSGIHRSMGVHVSKVRSLTLDRWTEPLVELLLEAGNRNANRVWEASRDSPCFSQMKAKMRPDSDRSTREAFIRSKYEQRRFLDPPHVPSPEASLSSSRLLFDACGSGDMLGALWCMAHGADVNWANPDAGGCTCAHEAARRSRVALLELLANNGCNLGALTD 792
            +N  CVDC  P PDW SI+LG++MCIECSG+HR++G H+SKVRSLTLD      + ++   GN   N+V+E+       S    K+ P + R  RE FIR KYE R+F+ P     P A     ++L+DA   G+M GA+  MA GA VN A PDAGG T  H AA      ++E L  NG NL  L D
Sbjct:  769 SNRLCVDCNRPRPDWCSINLGILMCIECSGVHRALGAHISKVRSLTLDVLPCESLCVMECLGNDAINKVYESGLHEVGAS----KIGPGTTRDERETFIRDKYENRKFIKPFQ---PTAQGEVQKMLYDAAADGNMQGAIQAMAMGAHVNKAAPDAGGNTALHAAAAGGHHLMIEFLWQNGANLDVLND 950          
BLAST of mRNA_H-canaliculatus_F_contig10681.652.1 vs. uniprot
Match: A0A4D9CVE4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVE4_9STRA)

HSP 1 Score: 146 bits (369), Expect = 4.150e-36
Identity = 87/197 (44.16%), Postives = 112/197 (56.85%), Query Frame = 1
Query:  220 RGANPECVDCGAPDPDWSSISLGVMMCIECSGIHRSMGVHVSKVRSLTLDRWTEPLVELLLEAGNRNANRVWEASRDSPCFSQMKAKMRPDSDRSTREAFIRSKYEQRRFLDPPHVPSPEAS-----LSSSRLLFDACGSGDMLGALWCMAHGADVNWANPDAGGCTCAHEAARRSR-VALLELLANNGCNLGALTD 792
            R ANP C DC  P+PDW+S+S G +MCIECSGIHRS+GVHVSKVRSL LD W   L E++   GN  AN+VWEA    PC  +   K   ++ R  REA+IR KY ++ FL        EA         + +L+ A   GD+    W +AHGADVN+AN      T  H   +R + +A LE L  NG  +  + D
Sbjct:  903 REANPVCADCQRPEPDWASVSFGTVMCIECSGIHRSLGVHVSKVRSLLLDAWPRSLREVMEAIGNLRANQVWEAQ--VPCDLE---KPGVEAPREVREAWIRDKYVRKAFLGQSRRTEKEAEGVKGQEEPNAVLYAAAIQGDLAKMGWALAHGADVNFANGKERRRTPVHAVCQRGQSLAALEFLVLNGGAVDVVDD 1094          
BLAST of mRNA_H-canaliculatus_F_contig10681.652.1 vs. uniprot
Match: UPI000A1C6F0C (arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1-like n=1 Tax=Boleophthalmus pectinirostris TaxID=150288 RepID=UPI000A1C6F0C)

HSP 1 Score: 139 bits (350), Expect = 8.840e-36
Identity = 85/231 (36.80%), Postives = 123/231 (53.25%), Query Frame = 1
Query:  139 DYFVALNKAQLTRLLEASEQKKKN--------------YGSRGANPECVDCGAPDPDWSSISLGVMMCIECSGIHRSMGVHVSKVRSLTLDRWTEPLVELLLEAGNRNANRVWEASRDSPCFSQMKAKMRPDSDRSTREAFIRSKYEQRRFLDPPHVPSPEASLSSSRLLFDACGSGDMLGALWCMAHGA--DVNWANPDAGGCTCAHEAARRSRVALLELLANNGCNLGA 783
            D +V + ++Q+   L++ E  K                  ++  N  CVDCGA DPDW+S++LG ++CIECSGIHR++G H+S+VRSL LD W   L+++L   GN   N VWE S      +Q + K  PD+ R  RE +IR+KYEQR FL P     P + LS  + L  A    D+   +  +AHG+   VN    +    T  H +A R  V + +LL   G ++ A
Sbjct:   30 DAWVQVIESQILHSLQSCESSKNKSRLPSQTEAMALQAIRNQRGNSLCVDCGARDPDWASLNLGALICIECSGIHRNLGTHLSRVRSLHLDDWPLELIKVLSSIGNDLCNAVWEGS------TQGRQKPTPDASREERERWIRAKYEQRLFLPP----LPPSDLSLGQALLRAVADDDLPSVVLILAHGSRVQVNQTYSETDPRTALHLSAGRGNVVVTQLLIWYGVDVAA 250          
BLAST of mRNA_H-canaliculatus_F_contig10681.652.1 vs. uniprot
Match: L8GVT4_ACACA (Ras subfamily protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GVT4_ACACA)

HSP 1 Score: 143 bits (360), Expect = 1.670e-35
Identity = 82/196 (41.84%), Postives = 110/196 (56.12%), Query Frame = 1
Query:  181 LEASEQKKKNYGSRGANPECVDCGAPDPDWSSISLGVMMCIECSGIHRSMGVHVSKVRSLTLDRWTEPLVELLLEAGNRNANRVWEASRDSPCFSQMKAKMRPDSDRSTREAFIRSKYEQRRFLDPPHVPSPEASLSSSRLLFDACGSGDMLGALWCMAHGADVNWANPDAGGCTCAHEAARRSR-VALLELLANN 765
            L+  E+ KK   +R     CVDCGA DPDW SI+LG++MCI+CSG+HRSMGVH+SKVRS+TLD     + +L+   GNR  N +WE           K K  P  DR T+E FIR+KY  R F+    + +     S  R L++A    D+   L C++ G + NW N D  G T  H AA     +A L L+ N+
Sbjct:  350 LQTWEELKKQTENRA----CVDCGAADPDWISINLGLLMCIQCSGVHRSMGVHISKVRSITLDELEAEVQDLMKSIGNRMVNSLWERG----LAQSAKRKPSPTDDRPTKEKFIRAKYADREFVVKEDIDAN----SLGRRLYEAAACNDLEDILACVSQGVEPNWRNADDHGRTALHAAAAAGHGLACLMLILNS 533          
BLAST of mRNA_H-canaliculatus_F_contig10681.652.1 vs. uniprot
Match: A0A1S3WUV1_ERIEU (arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1-like n=1 Tax=Erinaceus europaeus TaxID=9365 RepID=A0A1S3WUV1_ERIEU)

HSP 1 Score: 142 bits (357), Expect = 1.950e-35
Identity = 86/212 (40.57%), Postives = 122/212 (57.55%), Query Frame = 1
Query:  157 NKAQLTRLLEASE-QKKKNYGSRGANPECVDCGAPDPDWSSISLGVMMCIECSGIHRSMGVHVSKVRSLTLDRWTEPLVELLLEAGNRNANRVWEASRDSPCFSQMKAKMRPDSDRSTREAFIRSKYEQRRFLDPPHVPSPEASLSSSRLLFDACGSGDMLGALWCMAHGA--DVNWANPDAGGCTCAHEAARRSRVALLELLANNGCNLGA 783
            +K++LT   EA   Q  +N   RG N  CVDC   +P W+S++LG +MCI+CSGIHR++G H+S+VRSL LD W   L++++   GN+ AN +WE        +Q + K  PDS R  +E +IR+KYEQ+ FL     P P + LS  +LL  A    D+   +  +AHG+  DVN    D  G T  H A  + RV L +LL   G ++ A
Sbjct:  237 SKSRLTSQSEAMVLQSIRNI--RG-NSHCVDCDTQNPTWASLNLGALMCIQCSGIHRNLGTHLSRVRSLDLDEWPPELLQVMSAIGNQLANSIWEHG------AQGRTKPAPDSSREEKECWIRAKYEQKLFL----APLPCSELSPGQLLLHATAEDDLPAVILLLAHGSRQDVNTTCGDGDGRTALHLACHQGRVVLAQLLIWYGVDVAA 435          
BLAST of mRNA_H-canaliculatus_F_contig10681.652.1 vs. uniprot
Match: A0A8C5A5Z1_GADMO (ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 n=1 Tax=Gadus morhua TaxID=8049 RepID=A0A8C5A5Z1_GADMO)

HSP 1 Score: 143 bits (360), Expect = 5.200e-35
Identity = 85/211 (40.28%), Postives = 119/211 (56.40%), Query Frame = 1
Query:  157 NKAQLTRLLEASEQKKKNYGSRGANPECVDCGAPDPDWSSISLGVMMCIECSGIHRSMGVHVSKVRSLTLDRWTEPLVELLLEAGNRNANRVWEASRDSPCFSQMKAKMRPDSDRSTREAFIRSKYEQRRFLDPPHVPSPEASLSSSRLLFDACGSGDMLGALWCMAHGA--DVNWANPDAGGCTCAHEAARRSRVALLELLANNGCNLGA 783
            NK++LT   EA     ++  S   N  C DC A  PDW+S++LG ++CIECSGIHR++G H+S+VRSL LD W   L+++L   GN  AN VWEA+      +Q + K  PD+ R  RE +IR+KYEQR F+ P   P     LS  + L  A    D+   +  +AHG+   VN    +  G T  H A+R+  V + +LL   G +L A
Sbjct:  508 NKSRLTSQTEA--MALQSVRSLRGNSRCADCEAQSPDWASLNLGSLICIECSGIHRNLGTHLSRVRSLDLDEWPLELIKVLSAIGNELANSVWEAN------AQGRHKPTPDATREERERWIRAKYEQRLFVAPLLPPGGAGDLSLGQQLLHATAEEDLRAVVLLLAHGSRPQVNETCGEGDGRTALHLASRKGNVVIAQLLIWYGVDLMA 710          
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10681.652.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FVG0_ECTSI1.950e-9962.64Centaurin, beta 5, isoform CRA_a n=1 Tax=Ectocarpu... [more]
A0A6H5L2J8_9PHAE6.260e-9872.94Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A835ZCL2_9STRA2.450e-5153.37Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
W7T4W5_9STRA1.760e-3844.16Ankyrin repeat-containing protein n=1 Tax=Nannochl... [more]
A0A7R9YAC1_9STRA1.840e-3745.50Hypothetical protein n=2 Tax=Pinguiococcus pyrenoi... [more]
A0A4D9CVE4_9STRA4.150e-3644.16Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
UPI000A1C6F0C8.840e-3636.80arf-GAP with GTPase, ANK repeat and PH domain-cont... [more]
L8GVT4_ACACA1.670e-3541.84Ras subfamily protein n=1 Tax=Acanthamoeba castell... [more]
A0A1S3WUV1_ERIEU1.950e-3540.57arf-GAP with GTPase, ANK repeat and PH domain-cont... [more]
A0A8C5A5Z1_GADMO5.200e-3540.28ArfGAP with GTPase domain, ankyrin repeat and PH d... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-canaliculatus_F_contig10681contigH-canaliculatus_F_contig10681:1123..4512 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef902022-09-19
OGS1.0 of Hapterophycus canaliculatus Oshoro5f female2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score314.3
Seed ortholog evalue5.5e-83
Seed eggNOG ortholog2880.D7FVG0
Preferred nameAGD4
KEGG koko:K12489
KEGG Pathwayko04144,map04144
GOsGO:0003002,GO:0003674,GO:0005096,GO:0005488,GO:0005543,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005798,GO:0005829,GO:0005886,GO:0006810,GO:0006897,GO:0006996,GO:0007010,GO:0007275,GO:0007389,GO:0008047,GO:0008150,GO:0008289,GO:0009653,GO:0009719,GO:0009725,GO:0009733,GO:0009888,GO:0009965,GO:0009987,GO:0010016,GO:0010033,GO:0010051,GO:0010087,GO:0012505,GO:0016020,GO:0016043,GO:0016192,GO:0030133,GO:0030135,GO:0030136,GO:0030139,GO:0030140,GO:0030234,GO:0030695,GO:0031410,GO:0031982,GO:0032501,GO:0032502,GO:0035091,GO:0042221,GO:0043085,GO:0043087,GO:0043167,GO:0043168,GO:0043226,GO:0043227,GO:0043229,GO:0043547,GO:0044093,GO:0044424,GO:0044444,GO:0044464,GO:0048366,GO:0048367,GO:0048731,GO:0048827,GO:0048856,GO:0050790,GO:0050896,GO:0051179,GO:0051234,GO:0051336,GO:0051345,GO:0060589,GO:0065007,GO:0065009,GO:0071840,GO:0071944,GO:0097708,GO:0098657,GO:0098772,GO:0099402,GO:1905392
EggNOG free text desc.GTPase activator activity
EggNOG OGsCOG5347@1,KOG0521@2759
COG Functional cat.U
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko04131,ko04147
Hectar predicted targeting categoryother localisation
Ec32 ortholog descriptionAnkyrin repeat-containing domain
Ec32 orthologEc-09_000950.1
Exons5
Model size813
Cds size813
Stop0
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-canaliculatus_F_contig10681.652.1prot_H-canaliculatus_F_contig10681.652.1Hapterophycus canaliculatus Oshoro5f femalepolypeptideH-canaliculatus_F_contig10681 1123..4512 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622928728.9611347-CDS-H-canaliculatus_F_contig10681:1122..12381622928728.9611347-CDS-H-canaliculatus_F_contig10681:1122..1238Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10681 1123..1238 -
1696845541.0779998-CDS-H-canaliculatus_F_contig10681:1122..12381696845541.0779998-CDS-H-canaliculatus_F_contig10681:1122..1238Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10681 1123..1238 -
1622928728.9786768-CDS-H-canaliculatus_F_contig10681:2006..21311622928728.9786768-CDS-H-canaliculatus_F_contig10681:2006..2131Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10681 2007..2131 -
1696845541.0931144-CDS-H-canaliculatus_F_contig10681:2006..21311696845541.0931144-CDS-H-canaliculatus_F_contig10681:2006..2131Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10681 2007..2131 -
1622928728.9934342-CDS-H-canaliculatus_F_contig10681:2650..28741622928728.9934342-CDS-H-canaliculatus_F_contig10681:2650..2874Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10681 2651..2874 -
1696845541.1035106-CDS-H-canaliculatus_F_contig10681:2650..28741696845541.1035106-CDS-H-canaliculatus_F_contig10681:2650..2874Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10681 2651..2874 -
1622928729.0106256-CDS-H-canaliculatus_F_contig10681:3710..38331622928729.0106256-CDS-H-canaliculatus_F_contig10681:3710..3833Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10681 3711..3833 -
1696845541.1128888-CDS-H-canaliculatus_F_contig10681:3710..38331696845541.1128888-CDS-H-canaliculatus_F_contig10681:3710..3833Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10681 3711..3833 -
1622928729.025581-CDS-H-canaliculatus_F_contig10681:4287..45121622928729.025581-CDS-H-canaliculatus_F_contig10681:4287..4512Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10681 4288..4512 -
1696845541.1224182-CDS-H-canaliculatus_F_contig10681:4287..45121696845541.1224182-CDS-H-canaliculatus_F_contig10681:4287..4512Hapterophycus canaliculatus Oshoro5f femaleCDSH-canaliculatus_F_contig10681 4288..4512 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-canaliculatus_F_contig10681.652.1

>prot_H-canaliculatus_F_contig10681.652.1 ID=prot_H-canaliculatus_F_contig10681.652.1|Name=mRNA_H-canaliculatus_F_contig10681.652.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=271bp
ASGEWDWQLPSGSAWPSSATATATPSEMGSGAGGSTAGFTSSATGNDYFV
ALNKAQLTRLLEASEQKKKNYGSRGANPECVDCGAPDPDWSSISLGVMMC
IECSGIHRSMGVHVSKVRSLTLDRWTEPLVELLLEAGNRNANRVWEASRD
SPCFSQMKAKMRPDSDRSTREAFIRSKYEQRRFLDPPHVPSPEASLSSSR
LLFDACGSGDMLGALWCMAHGADVNWANPDAGGCTCAHEAARRSRVALLE
LLANNGCNLGALTDKQVLTAT
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mRNA from alignment at H-canaliculatus_F_contig10681:1123..4512-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig10681.652.1 ID=mRNA_H-canaliculatus_F_contig10681.652.1|Name=mRNA_H-canaliculatus_F_contig10681.652.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3390bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10681:1123..4512- (Hapterophycus canaliculatus Oshoro5f female)
GCGTCTGGCGAGTGGGACTGGCAGTTACCGTCGGGGTCCGCGTGGCCGTC GTCGGCGACGGCGACGGCAACCCCCAGCGAGATGGGATCGGGGGCGGGAG GCTCGACGGCGGGGTTCACGTCTTCCGCTACCGGCAACGATTACTTCGTC GCCCTCAACAAGGCCCAGCTCACGAGGCTCCTCGAGGCGAGCGAACAAAA AAAAAAAAATTACGGCTCTCGAGGGGTTGGGATGCGAGTTTATCCGGCGG GATTCCGGAAGCCGGGGGTGGCCGTCGAGCCCTCCCCGGTCCCGTGGTAC CGCTGCCGGGCGTCGCGTATTTTCTTTTTCTTTTTTACTGCTTTTGCGTG CGCGACGCTGCGCATTTATTAGGAAAGAGAGTCAACAGCGCCACAGCAAT CCTCTCCTCAGAGACCAAAGTGAGGGCGCAATTTTTGTTTTTGTGCCATC CTGCCGGGCGGGGTGTCCGTGTTTGGGCTTCGTGGCTTGTCCCTTCCGTC TTCTGTGTTTGCCACTGCTGCTGCCGCCGTTGGTTGTTTTGGGCGGTGTC GCTGGTCTTCCTTCCTCTTCTCCTGGAGGTGCCGCTGCGGTGGCTGGTGT GAGACCTGGGTCAATATTGTTTTTGTTTATTCTCAACCTTTTCGCATATT TTGTACTCTGTCGCTTTCCGCCGCCTCAGGCCAACCCGGAGTGCGTCGAC TGCGGAGCCCCCGACCCCGACTGGTCTTCCATCAGCCTCGGAGTCATGAT GTGCATAGAGTGCTCGGGGATTCACCGCTCCATGGGGGTGCACGTCTCCA AGGTCAGCCGCCACTTGTTGCTGCTTGCGTTGTAGCCTGAACCTAAAATA ATCGCTTGAAGGTCGGCCACCGGCTGTGTCTCTGGTTGTGATTTTAACAC AAAAAGTCGTTGATGACGTTCGCCGCCAGCTGTTGTTGTTGTTGTTGTTG TTGTTGCTGTCTTCATCTCAAAAGATGTCCCAATCAGGCAGCCGGAAAGA GAGAGCCATGAAGTGCAGCTTTTTTTGCGGCGGCTTCGTAAAACACGCGG GCTGGATTGGTTCGAAGTCGATACGTACTGTTTGCTCTGTCTGCGGCCCG TGAGGGACTTGCTTGGTGCCCATGTTAGCCTACGATGTAGTACGAGAGTC AAGGACCTAAAGACGATTTTGCTTTTATTTGAAGAGAAGCGAGCACGTTT TGCGCCCGTTAAACAAGTAGCAGGTTGTGGAAGGGGTGACCATCGTTTCT ACGCCCCCCGCCCCCCCCTGCCTAGCCTCCAATCCCGCCGTCCAGCCATC TCACCACAGTCATCCCATGTTTGTGATGCCGCTCAAATGTACGGGGTCAG TTCAAACGACTTGTACGTACCCACGACGTGGATGCGAACAAGCGTACAGG CATGCGTCCGTCCCACTCACTCACATCAAAAAGGTTGCGTCCGACGCACG ATGCGTGCGTCCGGGCGCGCGGGCGAAGGACGACACCCCCACGAACGAGG CACGCGGCCTCGCTTGCGCAGGCAGCAGACAGCATCTCACACGTCCGAAC GAACAGAACAGGCGTGCACTCCAAACACTCAGACGGCGACCAAAACACAA TTCAACAAGAAGCAAATGCATGCATCGCACCCGTGCAGGTTCGGTCTTTG ACGCTGGACCGTTGGACGGAGCCCCTCGTGGAACTCCTCTTGGAGGCGGG GAACCGAAACGCCAACAGGGTGTGGGAGGCCTCCCGGGACAGCCCCTGTT TCTCCCAGATGAAGGCCAAGATGCGGCCCGACTCCGACCGCTCCACGAGG GAGGCGTTCATCAGGTCCAAGTACGAGCAGCGGAGATTCCTGGACCCCCC CCACGTCCCCAGGTGTGGTCCTGTTGCCGCTGTTGTCGCTGGTCAGGGTG GTCCTGTTGGTGCCCGTCTTCGAGCGCACGTCTTGCCGGCGTTTTCGTCC TTCTCTTGAGTCCCCCGCAGCCGTGCGGGCCGCGCGATAGTACCGGTGCT GCGGTGCCGAAAGCCGGGGCGGTCTCCCCCGCGGCCGCGCTCGGCTGATC TCCCCCGAATCGGCCACCCCGCTGTCGGAACGAACCCTGGCTATTCGTCA ACAGAGTACACCCTCTCTCTCCCTCCGTCCCTGCTTACCGGCGCCACCAC GGACGCGCTGGTGCGGCGCTCGTCTCCTTAAGGGCACCCCGGCACATTCG TTGCTCCATCCCCGATCGGTTGGAAGGGTTCGGGTGCGTTGGTCTTGTAC GCGTAGATCGTGCCCCAGGACCCCCCCCCCTCCTTCCTTCCTCGCCACCT GACCCCCCCCCTCCCCTCACCACTACCTCCGCCGCCGCCGACACGTGTTC CTGCGCTCTCCCCGCCGTCCGTTCCGTCCAGCCCGGAAGCTTCTCTGTCG TCCAGTCGCCTCCTCTTCGACGCCTGCGGCAGTGGCGACATGCTGGGGGC CTTGTGGTGCATGGCCCACGGAGCGGACGTTAACTGGGCCAACCCTGACG CTGGCGGTGAGCGATGAGAGAGGGGGGAGGGGGGAGAGAGAAGGACGGCG TACGGGGGGGGGGATGCGCTTCGGCTTGACGAGTAGGCCTTCGTCTTGTT GTTGTTGCTGTCGGCGGCGGCGGCGGCGGCGGCGTTGTTGTTGTTGTCGT CCTGATAGTTCACTGCCGGTGTTGTCGTTGTTGTTGGGGTGGTGCTGGCA GTTGTTGGCCACGGCCGTGTTGTTGCGAACGAGGTCGACTCTGGAGAGGG GGTAGGGAAAAGGATGCACCAGAAGGCAGCCTGGAGACAACTTTTTTTTT GTTCTGGAGGAAGAACGCGATGTGGCACGCACCATACCATCCTGTTGTTG ATTGCCAACGATGGCACGTACACAATCGTGTTGTTCATTGGTTTCGTGCG TGCCAACCTCCGGACCTGCCATGCCCGCTTGCGCCGCGAGGTTCGTGTAC AAGTAAGTACGCGAGAGAGGGTGGAGGATGGGTTTGAGCGTCTGAGCTTA CCCGAGCATTTGGCGCCGTGCCACTTTCCGCCTACTTGGTGTTCGTGGTG TCCCTCCACCCTGATGCCTACCGCTGCCGCGAGCCGCCATCACTCGTGGC TGCCCTCCTGACCCACCCCTCCGCCGCTTCTGCTGCCCGCCACGACCCTT GCTGATTTCGTCGTTCTGCTCTCTTGTTGCATTTTCCCCCGCAATCGGTG GACCTGCCTTCAACAACAAAACGGGAAAAAAAAAACATCAAAAAAACGAA AACCGGATAAACACAACGAGCCAGGATGCACCTGTGCACACGAGGCCGCG AGACGATCCCGTGTGGCCCTTCTGGAGCTGCTCGCCAATAACGGCTGTAA CCTCGGCGCCCTTACGGACAAGCAGGTATTAACGGCAACG
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Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10681:1123..4512-

>mRNA_H-canaliculatus_F_contig10681.652.1 ID=mRNA_H-canaliculatus_F_contig10681.652.1|Name=mRNA_H-canaliculatus_F_contig10681.652.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1626bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10681:1123..4512- (Hapterophycus canaliculatus Oshoro5f female)
GCGTCTGGCGAGTGGGACTGGCAGTTACCGTCGGGGTCCGCGTGGCCGTC
GTCGGCGACGGCGACGGCAACCCCCAGCGAGATGGGATCGGGGGCGGGAG
GCTCGACGGCGGGGTTCACGTCTTCCGCTACCGGCAACGATTACTTCGTC
GCCCTCAACAAGGCCCAGCTCACGAGGCTCCTCGAGGCGAGCGAACAAAA
AAAAAAAAATTACGGCTCTCGAGGGGCGTCTGGCGAGTGGGACTGGCAGT
TACCGTCGGGGTCCGCGTGGCCGTCGTCGGCGACGGCGACGGCAACCCCC
AGCGAGATGGGATCGGGGGCGGGAGGCTCGACGGCGGGGTTCACGTCTTC
CGCTACCGGCAACGATTACTTCGTCGCCCTCAACAAGGCCCAGCTCACGA
GGCTCCTCGAGGCGAGCGAACAAAAAAAAAAAAATTACGGCTCTCGAGGG
GCCAACCCGGAGTGCGTCGACTGCGGAGCCCCCGACCCCGACTGGTCTTC
CATCAGCCTCGGAGTCATGATGTGCATAGAGTGCTCGGGGATTCACCGCT
CCATGGGGGTGCACGTCTCCAAGGCCAACCCGGAGTGCGTCGACTGCGGA
GCCCCCGACCCCGACTGGTCTTCCATCAGCCTCGGAGTCATGATGTGCAT
AGAGTGCTCGGGGATTCACCGCTCCATGGGGGTGCACGTCTCCAAGGTTC
GGTCTTTGACGCTGGACCGTTGGACGGAGCCCCTCGTGGAACTCCTCTTG
GAGGCGGGGAACCGAAACGCCAACAGGGTGTGGGAGGCCTCCCGGGACAG
CCCCTGTTTCTCCCAGATGAAGGCCAAGATGCGGCCCGACTCCGACCGCT
CCACGAGGGAGGCGTTCATCAGGTCCAAGTACGAGCAGCGGAGATTCCTG
GACCCCCCCCACGTCCCCAGGTTCGGTCTTTGACGCTGGACCGTTGGACG
GAGCCCCTCGTGGAACTCCTCTTGGAGGCGGGGAACCGAAACGCCAACAG
GGTGTGGGAGGCCTCCCGGGACAGCCCCTGTTTCTCCCAGATGAAGGCCA
AGATGCGGCCCGACTCCGACCGCTCCACGAGGGAGGCGTTCATCAGGTCC
AAGTACGAGCAGCGGAGATTCCTGGACCCCCCCCACGTCCCCAGCCCGGA
AGCTTCTCTGTCGTCCAGTCGCCTCCTCTTCGACGCCTGCGGCAGTGGCG
ACATGCTGGGGGCCTTGTGGTGCATGGCCCACGGAGCGGACGTTAACTGG
GCCAACCCTGACGCTGGCGCCCGGAAGCTTCTCTGTCGTCCAGTCGCCTC
CTCTTCGACGCCTGCGGCAGTGGCGACATGCTGGGGGCCTTGTGGTGCAT
GGCCCACGGAGCGGACGTTAACTGGGCCAACCCTGACGCTGGCGGATGCA
CCTGTGCACACGAGGCCGCGAGACGATCCCGTGTGGCCCTTCTGGAGCTG
CTCGCCAATAACGGCTGTAACCTCGGCGCCCTTACGGACAAGCAGGTATT
AACGGCAACGGATGCACCTGTGCACACGAGGCCGCGAGACGATCCCGTGT
GGCCCTTCTGGAGCTGCTCGCCAATAACGGCTGTAACCTCGGCGCCCTTA
CGGACAAGCAGGTATTAACGGCAACG
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