mRNA_H-canaliculatus_F_contig10681.652.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig10681.652.1 vs. uniprot
Match: D7FVG0_ECTSI (Centaurin, beta 5, isoform CRA_a n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVG0_ECTSI) HSP 1 Score: 313 bits (802), Expect = 1.950e-99 Identity = 171/273 (62.64%), Postives = 200/273 (73.26%), Query Frame = 1 Query: 1 ASGEWDWQLPSGSAWPSSATAT-ATPSEMGSGAGGSTAGFTSSATGNDYFVALNKAQLTRLLEASEQKKKNYGSRGANPECVDCGAPDPDWSSISLGVMMCIECSGIHRSMGVHVSKVRSLTLDRWTEPLVELLLEAGNRNANRVWEASRD-SPCFSQMKAKMRPDSDRSTREAFIRSKYEQRRFLDPPHVPSPEASLSSSRLLFDACGSGDMLGALWCMAHGADVNWANPDAGGCTCAHEAARRSRVALLELLANNGCNLGALTDKQVLTAT 813 AS +WDWQ P+ S + T T A GG+ G A D ++LNKAQLT L EA NPECVDCGA +PDWSSI+LGVMMCIECSGIHRSMGVHVSKVRSLTLDRWT PLVELLL+AGN NAN VWEA RD +P FS MKAK+ P++DR++RE FIR+KYE+RRF+DPPH SPE +LSSSRLLFDAC G+ML A+WC+AHGADVNW + GG T AHEAAR SRVALLELLANNGC+L A ++ + ++T Sbjct: 382 ASADWDWQSPNSSISTGTFTLTGAXXXXXXXDKGGAAGGGAELAMPAD--MSLNKAQLTSLWEA-------------NPECVDCGAREPDWSSINLGVMMCIECSGIHRSMGVHVSKVRSLTLDRWTTPLVELLLKAGNHNANEVWEAHRDGNPAFSAMKAKLYPEADRASREEFIRAKYEKRRFVDPPHDTSPEVALSSSRLLFDACKEGNMLEAMWCLAHGADVNWTDTTGGGYTAAHEAARGSRVALLELLANNGCDLSATSENKCNSST 639
BLAST of mRNA_H-canaliculatus_F_contig10681.652.1 vs. uniprot
Match: A0A6H5L2J8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2J8_9PHAE) HSP 1 Score: 317 bits (811), Expect = 6.260e-98 Identity = 159/218 (72.94%), Postives = 180/218 (82.57%), Query Frame = 1 Query: 148 VALNKAQLTRLLEASEQKKKNYGSRGANPECVDCGAPDPDWSSISLGVMMCIECSGIHRSMGVHVSKVRSLTLDRWTEPLVELLLEAGNRNANRVWEASRD-SPCFSQMKAKMRPDSDRSTREAFIRSKYEQRRFLDPPHVPSPEASLSSSRLLFDACGSGDMLGALWCMAHGADVNWANPDAGGCTCAHEAARRSRVALLELLANNGCNLGALTDKQ 798 ++LNKAQLT L EAS ANPECVDCGA +PDWSSI+LGVMMCIECSGIHRSMGVHVSKVRSLTLDRWT PLVELL EAGN NAN VWEA RD +P FS MKAK+ P++DR++REAFIR+KYEQRRF+DPPH SPEA+LSSSRLLFDAC G+M+ A+WC+AHGADVNW N GG T AHEAAR SRVALLELLANNGC+L A ++ + Sbjct: 687 MSLNKAQLTSLWEAS----------AANPECVDCGAREPDWSSINLGVMMCIECSGIHRSMGVHVSKVRSLTLDRWTTPLVELLREAGNHNANEVWEAHRDGNPAFSAMKAKLYPEADRASREAFIRAKYEQRRFIDPPHDASPEAALSSSRLLFDACKEGNMVEAMWCLAHGADVNWTNTAEGGYTAAHEAARGSRVALLELLANNGCDLSATSENK 894
BLAST of mRNA_H-canaliculatus_F_contig10681.652.1 vs. uniprot
Match: A0A835ZCL2_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZCL2_9STRA) HSP 1 Score: 190 bits (483), Expect = 2.450e-51 Identity = 103/193 (53.37%), Postives = 130/193 (67.36%), Query Frame = 1 Query: 226 ANPECVDCGAPDPDWSSISLGVMMCIECSGIHRSMGVHVSKVRSLTLDRWTEPLVELLLEA-GNRNANRVWEASRDSPCFSQMKAKMRPDSDRSTREAFIRSKYEQRRFLDPPHVPSPEASLSSSRLLFDACGSGDMLGALWCMAHGADVNWANPDAGGCTCAHEAARRSRVALLELLANNGCNLGALTDKQV 801 ANP+CVDCGA PDW+SISLGV+MCIECSGIHRSMGVH+SKVRSL LDRWT L+ L+E+ GN N VWEA S+ + ++ PDSDR+ RE+FIR KY R F+ P P +++R L+ A +G+M L +AHGAD+NWAN T AH+A R ++A+LELL+ NG L AL D V Sbjct: 933 ANPQCVDCGAATPDWASISLGVLMCIECSGIHRSMGVHISKVRSLMLDRWTPSLLLQLMESVGNTTFNAVWEAD-----MSESQPRLAPDSDRTARESFIRRKYMMRAFIGPRLGPD-----AANRELYAAAKTGEMQRVLTAIAHGADLNWANEQEHMSTPAHQAVRGGQLAVLELLSQNGAALDALQDDDV 1115
BLAST of mRNA_H-canaliculatus_F_contig10681.652.1 vs. uniprot
Match: W7T4W5_9STRA (Ankyrin repeat-containing protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T4W5_9STRA) HSP 1 Score: 147 bits (370), Expect = 1.760e-38 Identity = 87/197 (44.16%), Postives = 112/197 (56.85%), Query Frame = 1 Query: 220 RGANPECVDCGAPDPDWSSISLGVMMCIECSGIHRSMGVHVSKVRSLTLDRWTEPLVELLLEAGNRNANRVWEASRDSPCFSQMKAKMRPDSDRSTREAFIRSKYEQRRFLDPPHVPSPEAS-----LSSSRLLFDACGSGDMLGALWCMAHGADVNWANPDAGGCTCAHEAARRSR-VALLELLANNGCNLGALTD 792 R ANP C DC P+PDW+S+S G +MCIECSGIHRS+GVHVSKVRSL LD W L E++ GN AN+VWEA PC + K ++ R REA+IR KY ++ FL P EA + +L+ A GD+ W +AHGADVN+AN T H +R + +A L L NG + + D Sbjct: 84 REANPVCADCQRPEPDWASVSFGTVMCIECSGIHRSLGVHVSKVRSLLLDAWPRSLREVMEAMGNLRANQVWEAR--VPCDLE---KPGVEAPREVREAWIRDKYVRKAFLGPSRRTEKEADGVKGQEEPNAVLYAAAIQGDLAKMGWALAHGADVNFANGKERRRTPVHAVCQRGQSLAALAFLVLNGGAVDVVDD 275
BLAST of mRNA_H-canaliculatus_F_contig10681.652.1 vs. uniprot
Match: A0A7R9YAC1_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YAC1_9STRA) HSP 1 Score: 150 bits (379), Expect = 1.840e-37 Identity = 86/189 (45.50%), Postives = 111/189 (58.73%), Query Frame = 1 Query: 226 ANPECVDCGAPDPDWSSISLGVMMCIECSGIHRSMGVHVSKVRSLTLDRWTEPLVELLLEAGNRNANRVWEASRDSPCFSQMKAKMRPDSDRSTREAFIRSKYEQRRFLDPPHVPSPEASLSSSRLLFDACGSGDMLGALWCMAHGADVNWANPDAGGCTCAHEAARRSRVALLELLANNGCNLGALTD 792 +N CVDC P PDW SI+LG++MCIECSG+HR++G H+SKVRSLTLD + ++ GN N+V+E+ S K+ P + R RE FIR KYE R+F+ P P A ++L+DA G+M GA+ MA GA VN A PDAGG T H AA ++E L NG NL L D Sbjct: 769 SNRLCVDCNRPRPDWCSINLGILMCIECSGVHRALGAHISKVRSLTLDVLPCESLCVMECLGNDAINKVYESGLHEVGAS----KIGPGTTRDERETFIRDKYENRKFIKPFQ---PTAQGEVQKMLYDAAADGNMQGAIQAMAMGAHVNKAAPDAGGNTALHAAAAGGHHLMIEFLWQNGANLDVLND 950
BLAST of mRNA_H-canaliculatus_F_contig10681.652.1 vs. uniprot
Match: A0A4D9CVE4_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CVE4_9STRA) HSP 1 Score: 146 bits (369), Expect = 4.150e-36 Identity = 87/197 (44.16%), Postives = 112/197 (56.85%), Query Frame = 1 Query: 220 RGANPECVDCGAPDPDWSSISLGVMMCIECSGIHRSMGVHVSKVRSLTLDRWTEPLVELLLEAGNRNANRVWEASRDSPCFSQMKAKMRPDSDRSTREAFIRSKYEQRRFLDPPHVPSPEAS-----LSSSRLLFDACGSGDMLGALWCMAHGADVNWANPDAGGCTCAHEAARRSR-VALLELLANNGCNLGALTD 792 R ANP C DC P+PDW+S+S G +MCIECSGIHRS+GVHVSKVRSL LD W L E++ GN AN+VWEA PC + K ++ R REA+IR KY ++ FL EA + +L+ A GD+ W +AHGADVN+AN T H +R + +A LE L NG + + D Sbjct: 903 REANPVCADCQRPEPDWASVSFGTVMCIECSGIHRSLGVHVSKVRSLLLDAWPRSLREVMEAIGNLRANQVWEAQ--VPCDLE---KPGVEAPREVREAWIRDKYVRKAFLGQSRRTEKEAEGVKGQEEPNAVLYAAAIQGDLAKMGWALAHGADVNFANGKERRRTPVHAVCQRGQSLAALEFLVLNGGAVDVVDD 1094
BLAST of mRNA_H-canaliculatus_F_contig10681.652.1 vs. uniprot
Match: UPI000A1C6F0C (arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1-like n=1 Tax=Boleophthalmus pectinirostris TaxID=150288 RepID=UPI000A1C6F0C) HSP 1 Score: 139 bits (350), Expect = 8.840e-36 Identity = 85/231 (36.80%), Postives = 123/231 (53.25%), Query Frame = 1 Query: 139 DYFVALNKAQLTRLLEASEQKKKN--------------YGSRGANPECVDCGAPDPDWSSISLGVMMCIECSGIHRSMGVHVSKVRSLTLDRWTEPLVELLLEAGNRNANRVWEASRDSPCFSQMKAKMRPDSDRSTREAFIRSKYEQRRFLDPPHVPSPEASLSSSRLLFDACGSGDMLGALWCMAHGA--DVNWANPDAGGCTCAHEAARRSRVALLELLANNGCNLGA 783 D +V + ++Q+ L++ E K ++ N CVDCGA DPDW+S++LG ++CIECSGIHR++G H+S+VRSL LD W L+++L GN N VWE S +Q + K PD+ R RE +IR+KYEQR FL P P + LS + L A D+ + +AHG+ VN + T H +A R V + +LL G ++ A Sbjct: 30 DAWVQVIESQILHSLQSCESSKNKSRLPSQTEAMALQAIRNQRGNSLCVDCGARDPDWASLNLGALICIECSGIHRNLGTHLSRVRSLHLDDWPLELIKVLSSIGNDLCNAVWEGS------TQGRQKPTPDASREERERWIRAKYEQRLFLPP----LPPSDLSLGQALLRAVADDDLPSVVLILAHGSRVQVNQTYSETDPRTALHLSAGRGNVVVTQLLIWYGVDVAA 250
BLAST of mRNA_H-canaliculatus_F_contig10681.652.1 vs. uniprot
Match: L8GVT4_ACACA (Ras subfamily protein n=1 Tax=Acanthamoeba castellanii str. Neff TaxID=1257118 RepID=L8GVT4_ACACA) HSP 1 Score: 143 bits (360), Expect = 1.670e-35 Identity = 82/196 (41.84%), Postives = 110/196 (56.12%), Query Frame = 1 Query: 181 LEASEQKKKNYGSRGANPECVDCGAPDPDWSSISLGVMMCIECSGIHRSMGVHVSKVRSLTLDRWTEPLVELLLEAGNRNANRVWEASRDSPCFSQMKAKMRPDSDRSTREAFIRSKYEQRRFLDPPHVPSPEASLSSSRLLFDACGSGDMLGALWCMAHGADVNWANPDAGGCTCAHEAARRSR-VALLELLANN 765 L+ E+ KK +R CVDCGA DPDW SI+LG++MCI+CSG+HRSMGVH+SKVRS+TLD + +L+ GNR N +WE K K P DR T+E FIR+KY R F+ + + S R L++A D+ L C++ G + NW N D G T H AA +A L L+ N+ Sbjct: 350 LQTWEELKKQTENRA----CVDCGAADPDWISINLGLLMCIQCSGVHRSMGVHISKVRSITLDELEAEVQDLMKSIGNRMVNSLWERG----LAQSAKRKPSPTDDRPTKEKFIRAKYADREFVVKEDIDAN----SLGRRLYEAAACNDLEDILACVSQGVEPNWRNADDHGRTALHAAAAAGHGLACLMLILNS 533
BLAST of mRNA_H-canaliculatus_F_contig10681.652.1 vs. uniprot
Match: A0A1S3WUV1_ERIEU (arf-GAP with GTPase, ANK repeat and PH domain-containing protein 1-like n=1 Tax=Erinaceus europaeus TaxID=9365 RepID=A0A1S3WUV1_ERIEU) HSP 1 Score: 142 bits (357), Expect = 1.950e-35 Identity = 86/212 (40.57%), Postives = 122/212 (57.55%), Query Frame = 1 Query: 157 NKAQLTRLLEASE-QKKKNYGSRGANPECVDCGAPDPDWSSISLGVMMCIECSGIHRSMGVHVSKVRSLTLDRWTEPLVELLLEAGNRNANRVWEASRDSPCFSQMKAKMRPDSDRSTREAFIRSKYEQRRFLDPPHVPSPEASLSSSRLLFDACGSGDMLGALWCMAHGA--DVNWANPDAGGCTCAHEAARRSRVALLELLANNGCNLGA 783 +K++LT EA Q +N RG N CVDC +P W+S++LG +MCI+CSGIHR++G H+S+VRSL LD W L++++ GN+ AN +WE +Q + K PDS R +E +IR+KYEQ+ FL P P + LS +LL A D+ + +AHG+ DVN D G T H A + RV L +LL G ++ A Sbjct: 237 SKSRLTSQSEAMVLQSIRNI--RG-NSHCVDCDTQNPTWASLNLGALMCIQCSGIHRNLGTHLSRVRSLDLDEWPPELLQVMSAIGNQLANSIWEHG------AQGRTKPAPDSSREEKECWIRAKYEQKLFL----APLPCSELSPGQLLLHATAEDDLPAVILLLAHGSRQDVNTTCGDGDGRTALHLACHQGRVVLAQLLIWYGVDVAA 435
BLAST of mRNA_H-canaliculatus_F_contig10681.652.1 vs. uniprot
Match: A0A8C5A5Z1_GADMO (ArfGAP with GTPase domain, ankyrin repeat and PH domain 1 n=1 Tax=Gadus morhua TaxID=8049 RepID=A0A8C5A5Z1_GADMO) HSP 1 Score: 143 bits (360), Expect = 5.200e-35 Identity = 85/211 (40.28%), Postives = 119/211 (56.40%), Query Frame = 1 Query: 157 NKAQLTRLLEASEQKKKNYGSRGANPECVDCGAPDPDWSSISLGVMMCIECSGIHRSMGVHVSKVRSLTLDRWTEPLVELLLEAGNRNANRVWEASRDSPCFSQMKAKMRPDSDRSTREAFIRSKYEQRRFLDPPHVPSPEASLSSSRLLFDACGSGDMLGALWCMAHGA--DVNWANPDAGGCTCAHEAARRSRVALLELLANNGCNLGA 783 NK++LT EA ++ S N C DC A PDW+S++LG ++CIECSGIHR++G H+S+VRSL LD W L+++L GN AN VWEA+ +Q + K PD+ R RE +IR+KYEQR F+ P P LS + L A D+ + +AHG+ VN + G T H A+R+ V + +LL G +L A Sbjct: 508 NKSRLTSQTEA--MALQSVRSLRGNSRCADCEAQSPDWASLNLGSLICIECSGIHRNLGTHLSRVRSLDLDEWPLELIKVLSAIGNELANSVWEAN------AQGRHKPTPDATREERERWIRAKYEQRLFVAPLLPPGGAGDLSLGQQLLHATAEEDLRAVVLLLAHGSRPQVNETCGEGDGRTALHLASRKGNVVIAQLLIWYGVDLMA 710 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10681.652.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig10681.652.1 >prot_H-canaliculatus_F_contig10681.652.1 ID=prot_H-canaliculatus_F_contig10681.652.1|Name=mRNA_H-canaliculatus_F_contig10681.652.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=271bp ASGEWDWQLPSGSAWPSSATATATPSEMGSGAGGSTAGFTSSATGNDYFVback to top mRNA from alignment at H-canaliculatus_F_contig10681:1123..4512- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig10681.652.1 ID=mRNA_H-canaliculatus_F_contig10681.652.1|Name=mRNA_H-canaliculatus_F_contig10681.652.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3390bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10681:1123..4512- (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10681:1123..4512- >mRNA_H-canaliculatus_F_contig10681.652.1 ID=mRNA_H-canaliculatus_F_contig10681.652.1|Name=mRNA_H-canaliculatus_F_contig10681.652.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1626bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10681:1123..4512- (Hapterophycus canaliculatus Oshoro5f female)back to top |