Homology
BLAST of mRNA_H-canaliculatus_F_contig10190.212.1 vs. uniprot
Match:
D8LPW8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPW8_ECTSI)
HSP 1 Score: 371 bits (953), Expect = 3.400e-127
Identity = 181/189 (95.77%), Postives = 187/189 (98.94%), Query Frame = 1
Query: 1 RDVTERLQLLLRRAGHNLHTSAELEVVRQMKEELCYVAFNPSSEEQVKQPDTVYKLPDGQTIRVGPERYRAPECLFHPEQMGSECMGVHDCLLKGIMRTDMDMRRTLFGQVVLSGGSTLFPGFGDRLLNEVRKQAPKNLKIRITAPPERKFSTWVGGSILASLATFKDMWVTRAEFREHGPSIMDSKSL 567
RDVTERLQLLLRRAGH+LHTSAE+EVVRQMKE+LCYVAFNPS+EEQVKQPDTVYKLPDGQ IRVGPERYRAPECLFHPEQ+GSE MGVHDCLLKGIMRTDMDMRRTLFGQVVLSGGSTLFPGFGDRLLNEVRKQAPKNLKIRITAPPERKFSTWVGGSILASLATFKDMWVTRAEFREHGP+IMDSKSL
Sbjct: 187 RDVTERLQLLLRRAGHSLHTSAEMEVVRQMKEDLCYVAFNPSTEEQVKQPDTVYKLPDGQAIRVGPERYRAPECLFHPEQLGSESMGVHDCLLKGIMRTDMDMRRTLFGQVVLSGGSTLFPGFGDRLLNEVRKQAPKNLKIRITAPPERKFSTWVGGSILASLATFKDMWVTRAEFREHGPNIMDSKSL 375
BLAST of mRNA_H-canaliculatus_F_contig10190.212.1 vs. uniprot
Match:
A0A1V9ZXS0_9STRA (Actin (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZXS0_9STRA)
HSP 1 Score: 261 bits (668), Expect = 8.950e-84
Identity = 126/199 (63.32%), Postives = 160/199 (80.40%), Query Frame = 1
Query: 1 RDVTERLQLLLRRAGHNLHTSAELEVVRQMKEELCYVAFNPSSEEQV----------KQPDTVYKLPDGQTIRVGPERYRAPECLFHPEQMGSECMGVHDCLLKGIMRTDMDMRRTLFGQVVLSGGSTLFPGFGDRLLNEVRKQAPKNLKIRITAPPERKFSTWVGGSILASLATFKDMWVTRAEFREHGPSIMDSKSL 567
RDVT LQLL RRAG+ TSAELE+V+++KE+LCYVAFNP+ EEQ+ Q T Y+LPDG + +GPE++RAPE LF P+ +GSE GV DCL+ I+R+DMD+R+TLF Q+VLSGGSTLFPGFGDRLL+EVRK+APK++KIRI+APP R++STW+GGSILASLATFK MW+T+AE+ EHG SI+ K+L
Sbjct: 193 RDVTSYLQLLCRRAGYVFQTSAELEIVKEIKEKLCYVAFNPTKEEQLLHTSGDPQSASQISTEYRLPDGSVLNLGPEKFRAPEILFRPDLIGSEYTGVQDCLVHAILRSDMDLRKTLFSQIVLSGGSTLFPGFGDRLLSEVRKKAPKDIKIRISAPPARQYSTWIGGSILASLATFKTMWITKAEYEEHGASIVHRKTL 391
BLAST of mRNA_H-canaliculatus_F_contig10190.212.1 vs. uniprot
Match:
U6KLL3_EIMTE (Actin, putative n=1 Tax=Eimeria tenella TaxID=5802 RepID=U6KLL3_EIMTE)
HSP 1 Score: 255 bits (652), Expect = 1.690e-81
Identity = 126/193 (65.28%), Postives = 151/193 (78.24%), Query Frame = 1
Query: 1 RDVTERLQLLLRRAGHNLHTSAELEVVRQMKEELCYVAFNPSSEEQVKQPDT----VYKLPDGQTIRVGPERYRAPECLFHPEQMGSECMGVHDCLLKGIMRTDMDMRRTLFGQVVLSGGSTLFPGFGDRLLNEVRKQAPKNLKIRITAPPERKFSTWVGGSILASLATFKDMWVTRAEFREHGPSIMDSKSL 567
RDVTERL +LLRRAGH HTSAE E+VRQ+KE+ CYVAFNP EE Q + ++LPDG TI VG ERYRAPE LFHP +G E GVH+ ++ I R D+D+RRTLF Q+VL+GGST F GFGDRLLNE+RK APK++KIRI+APPERKFSTW+GGSILASL++FK MWV R E+ E GPSI+ K+L
Sbjct: 188 RDVTERLAILLRRAGHIFHTSAEFEIVRQIKEQACYVAFNPQKEEITTQDKSGGGYPFQLPDGTTISVGAERYRAPEILFHPSLVGLEYPGVHELVVNSISRADLDLRRTLFSQIVLAGGSTYFHGFGDRLLNEIRKAAPKDIKIRISAPPERKFSTWIGGSILASLSSFKKMWVPRQEYEECGPSILHRKTL 380
BLAST of mRNA_H-canaliculatus_F_contig10190.212.1 vs. uniprot
Match:
F0WRQ9_9STRA (Actinlike protein putative n=2 Tax=Albugo TaxID=65356 RepID=F0WRQ9_9STRA)
HSP 1 Score: 253 bits (647), Expect = 1.580e-80
Identity = 123/205 (60.00%), Postives = 162/205 (79.02%), Query Frame = 1
Query: 1 RDVTERLQLLLRRAGHNLHTSAELEVVRQMKEELCYVAFNPSSEEQVKQP---------------DTV-YKLPDGQTIRVGPERYRAPECLFHPEQMGSECMGVHDCLLKGIMRTDMDMRRTLFGQVVLSGGSTLFPGFGDRLLNEVRKQAPKNLKIRITAPPERKFSTWVGGSILASLATFKDMWVTRAEFREHGPSIMDSKSL 567
RDVT++LQ LLRR+G++ TSAE E+VR++KE+LCYVAFNPS EEQ++ DT+ Y LPDG + +G E++RAPE LF PE +GSEC GVH+ L++ IM++DMD+R+TLF Q++LSGGSTLFPGFGDRLL EVRK APK++KIRI+APP R STW+GGSILASLATFK+MW+T++E+ E+GPSI+ ++L
Sbjct: 193 RDVTDQLQKLLRRSGYHFQTSAEREIVREIKEKLCYVAFNPSKEEQIEADKLASAMNDPKSTSVDDTMAYYLPDGTLLNIGAEKFRAPEVLFRPELIGSECRGVHESLVQAIMKSDMDLRKTLFSQIILSGGSTLFPGFGDRLLAEVRKLAPKDIKIRISAPPTRLHSTWIGGSILASLATFKNMWITKSEYEEYGPSILHRRAL 397
BLAST of mRNA_H-canaliculatus_F_contig10190.212.1 vs. uniprot
Match:
A0A836CG82_9STRA (Actin family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG82_9STRA)
HSP 1 Score: 252 bits (644), Expect = 2.570e-80
Identity = 124/189 (65.61%), Postives = 145/189 (76.72%), Query Frame = 1
Query: 1 RDVTERLQLLLRRAGHNLHTSAELEVVRQMKEELCYVAFNPSSEEQVKQPDTVYKLPDGQTIRVGPERYRAPECLFHPEQMGSECMGVHDCLLKGIMRTDMDMRRTLFGQVVLSGGSTLFPGFGDRLLNEVRKQAPKNLKIRITAPPERKFSTWVGGSILASLATFKDMWVTRAEFREHGPSIMDSKSL 567
RDVTERL LLL AG L TSAE EV RQ+KEE CYVAF+P+ EE V+ D YKLPDGQ I +GPER+RAPE LF+P+ +GSE MG +CL I R DM++RR LF VVLSGGST GFGDRLLNE R+ AP+ KIRI APPER+ STW+GGSILASL+TF+ MWVTRAE+ EHG IMD++ L
Sbjct: 190 RDVTERLALLLGCAGCALRTSAEREVARQIKEEACYVAFDPAKEEDVRPADVPYKLPDGQVIMLGPERFRAPEVLFNPQLIGSEAMGAAECLTTAIARADMELRRALFASVVLSGGSTCLAGFGDRLLNEARRAAPRGTKIRIAAPPERRLSTWIGGSILASLSTFRTMWVTRAEYEEHGKGIMDARGL 378
BLAST of mRNA_H-canaliculatus_F_contig10190.212.1 vs. uniprot
Match:
W7U6E6_9STRA (Arp1 actin-related protein 1 centractin beta n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U6E6_9STRA)
HSP 1 Score: 252 bits (643), Expect = 3.330e-80
Identity = 116/190 (61.05%), Postives = 160/190 (84.21%), Query Frame = 1
Query: 1 RDVTERLQLLLRRAGHNLHTSAELEVVRQMKEELCYVAFNPSSEEQVK-QPDTVYKLPDGQTIRVGPERYRAPECLFHPEQMGSECMGVHDCLLKGIMRTDMDMRRTLFGQVVLSGGSTLFPGFGDRLLNEVRKQAPKNLKIRITAPPERKFSTWVGGSILASLATFKDMWVTRAEFREHGPSIMDSKSL 567
RDVT+ LQLLLRR+G+ LHTSAE ++VRQ+KEE CY++F+P EE+ QPDT ++LPDG I +G ER+RAPE LF PE +GSE GVH+C+++ IM+ D+D+R+ FGQ+VL+GGST+FPG+GDRLLNE RK AP+++KIRI+APPERK+STW+GGSILASL+TFK +W+T+ +++EHG I+ +++L
Sbjct: 187 RDVTDHLQLLLRRSGYKLHTSAEKDIVRQIKEEKCYLSFDPRKEEEAPPQPDT-FRLPDGTHILMGSERFRAPEILFQPELIGSEEKGVHECVIQSIMKADLDLRKAFFGQIVLAGGSTVFPGYGDRLLNETRKLAPRDVKIRISAPPERKYSTWIGGSILASLSTFKSLWITQRDYQEHGNQIVHTRTL 375
BLAST of mRNA_H-canaliculatus_F_contig10190.212.1 vs. uniprot
Match:
A0A2D4CJD5_PYTIN (Actin-like protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CJD5_PYTIN)
HSP 1 Score: 252 bits (643), Expect = 6.140e-80
Identity = 122/213 (57.28%), Postives = 160/213 (75.12%), Query Frame = 1
Query: 1 RDVTERLQLLLRRAGHNLHTSAELEVVRQMKEELCYVAFNPSSEEQVK------------------------QPDTVYKLPDGQTIRVGPERYRAPECLFHPEQMGSECMGVHDCLLKGIMRTDMDMRRTLFGQVVLSGGSTLFPGFGDRLLNEVRKQAPKNLKIRITAPPERKFSTWVGGSILASLATFKDMWVTRAEFREHGPSIMDSKSL 567
RDVT LQLLLRRAG+N TSAE E+VR++KE+LCYVAFNP+ EEQ++ + Y LPDG + +GPE++RAPE LF PE +GSE GVH+CL++ IM++DMD+R+TLF Q++LSGGST+FPGFGDRLL EVRK+APK++KIRI+APP R +STW+GGSILASLATFK+MW+T++E+ E+G SI+ K+
Sbjct: 184 RDVTAHLQLLLRRAGYNFQTSAEREIVREIKEKLCYVAFNPTKEEQLEAEKSAASVKDLLSGTKAKPVTPSSDDSSAYYLPDGTILNIGPEKFRAPEVLFRPELIGSEGGGVHECLVQAIMKSDMDLRKTLFSQIILSGGSTMFPGFGDRLLAEVRKKAPKDIKIRISAPPTRLYSTWIGGSILASLATFKNMWITKSEYEEYGASILYRKAF 396
BLAST of mRNA_H-canaliculatus_F_contig10190.212.1 vs. uniprot
Match:
A0A0G4H1C2_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4H1C2_VITBC)
HSP 1 Score: 251 bits (640), Expect = 1.130e-79
Identity = 122/193 (63.21%), Postives = 151/193 (78.24%), Query Frame = 1
Query: 1 RDVTERLQLLLRRAGHNLHTSAELEVVRQMKEELCYVAFNPSSEEQVKQPDTV----YKLPDGQTIRVGPERYRAPECLFHPEQMGSECMGVHDCLLKGIMRTDMDMRRTLFGQVVLSGGSTLFPGFGDRLLNEVRKQAPKNLKIRITAPPERKFSTWVGGSILASLATFKDMWVTRAEFREHGPSIMDSKSL 567
RDVTE LQL LRRAGH HTSAE+EVVRQ+KE CYVAFNP EE + T + LPDG I +GPER+RAPE LFHP Q+G E G+H+ L++ I R D+D+R+TL+ Q+VLSGGST+F GFGDRLLNEVR+ APK++KIRI+APPERKFST++GG+ILASLATFK MWV++ E+ E GP I+ K+
Sbjct: 189 RDVTEHLQLQLRRAGHVFHTSAEMEVVRQIKESTCYVAFNPQKEEHQEHDKTSASFPFHLPDGTQILLGPERFRAPEILFHPNQVGLEYPGIHELLVQSISRADLDLRKTLYSQIVLSGGSTMFAGFGDRLLNEVRRLAPKDIKIRISAPPERKFSTYLGGAILASLATFKKMWVSKEEYEEEGPGILHKKAF 381
BLAST of mRNA_H-canaliculatus_F_contig10190.212.1 vs. uniprot
Match:
A0A5D6YMY9_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YMY9_9STRA)
HSP 1 Score: 250 bits (639), Expect = 1.790e-79
Identity = 126/216 (58.33%), Postives = 160/216 (74.07%), Query Frame = 1
Query: 1 RDVTERLQLLLRRAGHNLHTSAELEVVRQMKEELCYVAFNPSSEEQV---------KQPD------------------TVYKLPDGQTIRVGPERYRAPECLFHPEQMGSECMGVHDCLLKGIMRTDMDMRRTLFGQVVLSGGSTLFPGFGDRLLNEVRKQAPKNLKIRITAPPERKFSTWVGGSILASLATFKDMWVTRAEFREHGPSIMDSKSL 567
RDVT +LQLLLRRAG+ TSAE EVVR++KE+LCYVAFNP+ EEQ+ K D + Y LPDG + +G E++RAPE LF PE +GSE GV DCL++ IM++DMD+R+TLF Q++LSGGSTLFPGFGDRLL EVRK+APK++KIRI+APP R +STW+GGSILASLATFK+MW+T++E+ EHG SI+ K+L
Sbjct: 170 RDVTAQLQLLLRRAGYRFETSAEREVVREVKEKLCYVAFNPAKEEQLEAERAAVAGKDDDLLSASKAKRRAAAPTDDASAYYLPDGTLLNIGAEKFRAPEVLFRPELIGSESGGVQDCLVQAIMKSDMDLRKTLFSQIILSGGSTLFPGFGDRLLAEVRKKAPKDIKIRISAPPTRLYSTWIGGSILASLATFKNMWITKSEYEEHGASILHRKAL 385
BLAST of mRNA_H-canaliculatus_F_contig10190.212.1 vs. uniprot
Match:
K3X404_GLOUD (Uncharacterized protein n=30 Tax=Oomycota TaxID=4762 RepID=K3X404_GLOUD)
HSP 1 Score: 250 bits (638), Expect = 4.020e-79
Identity = 122/213 (57.28%), Postives = 160/213 (75.12%), Query Frame = 1
Query: 1 RDVTERLQLLLRRAGHNLHTSAELEVVRQMKEELCYVAFNPSSEEQVKQPDTV------------------------YKLPDGQTIRVGPERYRAPECLFHPEQMGSECMGVHDCLLKGIMRTDMDMRRTLFGQVVLSGGSTLFPGFGDRLLNEVRKQAPKNLKIRITAPPERKFSTWVGGSILASLATFKDMWVTRAEFREHGPSIMDSKSL 567
RDVT LQLLLRRAG+N TSAE E+VR++KE+LCYVAFNP+ EEQ++ + Y LPDG + +G E++RAPE LF PE +GSE GVH+CL++ IM++DMD+R+TLF Q++LSGGST+FPGFGDRLL EVRK+APK++KIRI+APP R +STW+GGSILASLATFK+MW+T++E+ E+G SI+ K+L
Sbjct: 189 RDVTAHLQLLLRRAGYNFQTSAEREIVREIKEKLCYVAFNPAKEEQLEAEKSAIAVKDLLSSSKTKTGSAPSDDASAYYLPDGTLLNIGAEKFRAPEVLFRPEIIGSEGGGVHECLVQAIMKSDMDLRKTLFSQIILSGGSTMFPGFGDRLLAEVRKKAPKDIKIRISAPPTRLYSTWIGGSILASLATFKNMWITKSEYEEYGASILHRKAL 401
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10190.212.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90 )
Total hits: 25
0 1 Expect = 3.40e-127 / Id = 95.77 Expect = 8.95e-84 / Id = 63.32 Expect = 1.69e-81 / Id = 65.28 Expect = 1.58e-80 / Id = 60.00 Expect = 2.57e-80 / Id = 65.61 Expect = 3.33e-80 / Id = 61.05 Expect = 6.14e-80 / Id = 57.28 Expect = 1.13e-79 / Id = 63.21 Expect = 1.79e-79 / Id = 58.33 Expect = 4.02e-79 / Id = 57.28 Sequence D8LPW8_ECTSI A0A1V9ZXS0_9STRA U6KLL3_EIMTE F0WRQ9_9STRA A0A836CG82_9STRA W7U6E6_9STRA A0A2D4CJD5_PYTIN A0A0G4H1C2_VITBC A0A5D6YMY9_9STRA K3X404_GLOUD Pages
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Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Property Name Value
Taxonomic scope Eukaryota Seed ortholog score 372.9 Seed ortholog evalue 9.2e-101 Seed eggNOG ortholog 2880.D8LPW8 Preferred name ACTR1A KEGG ko ko:K16575 GOs GO:0000003,GO:0000086,GO:0000278,GO:0001775,GO:0002177,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0002478,GO:0002495,GO:0002504,GO:0003674,GO:0003824,GO:0005198,GO:0005200,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005798,GO:0005813,GO:0005814,GO:0005815,GO:0005829,GO:0005856,GO:0005869,GO:0005875,GO:0005884,GO:0005938,GO:0006793,GO:0006796,GO:0006810,GO:0006887,GO:0006888,GO:0006928,GO:0006955,GO:0006996,GO:0007010,GO:0007017,GO:0007018,GO:0007049,GO:0007276,GO:0007283,GO:0007346,GO:0008088,GO:0008089,GO:0008090,GO:0008150,GO:0008152,GO:0008976,GO:0009987,GO:0010389,GO:0010564,GO:0010970,GO:0012505,GO:0015629,GO:0015630,GO:0016043,GO:0016192,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0019882,GO:0019884,GO:0019886,GO:0019896,GO:0019953,GO:0022402,GO:0022406,GO:0022414,GO:0022607,GO:0030030,GO:0030031,GO:0030135,GO:0030137,GO:0030141,GO:0030705,GO:0031410,GO:0031974,GO:0031982,GO:0031983,GO:0032501,GO:0032504,GO:0032940,GO:0032991,GO:0034643,GO:0034774,GO:0036230,GO:0042119,GO:0043209,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043232,GO:0043233,GO:0043299,GO:0043312,GO:0044085,GO:0044237,GO:0044422,GO:0044424,GO:0044430,GO:0044433,GO:0044444,GO:0044446,GO:0044448,GO:0044450,GO:0044464,GO:0044703,GO:0044770,GO:0044772,GO:0044782,GO:0044839,GO:0045055,GO:0045321,GO:0046903,GO:0046907,GO:0047497,GO:0048002,GO:0048193,GO:0048232,GO:0048609,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051234,GO:0051640,GO:0051641,GO:0051646,GO:0051649,GO:0051654,GO:0051656,GO:0051704,GO:0051726,GO:0060205,GO:0060271,GO:0065007,GO:0070013,GO:0070925,GO:0071840,GO:0071944,GO:0072384,GO:0097708,GO:0097711,GO:0098930,GO:0099080,GO:0099081,GO:0099111,GO:0099503,GO:0099512,GO:0099513,GO:0099568,GO:0099738,GO:0101002,GO:0120031,GO:0120036,GO:0140056,GO:1901987,GO:1901990,GO:1902749,GO:1903047,GO:1904813 EggNOG free text desc. cytoskeleton organization EggNOG OGs COG5277@1,KOG0676@2759 COG Functional cat. Z Best tax level Eukaryota Best eggNOG OG NA|NA|NA BRITE ko00000,ko03036,ko04147,ko04812 Hectar predicted targeting category other localisation Ec32 ortholog description Actin family Ec32 ortholog Ec-15_001860.1 Exons 5 Model size 570 Cds size 570 Stop 1 Start 0
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Feature Name Unique Name Species Type Position
1622928647.5570514-CDS-H-canaliculatus_F_contig10190:156..231 1622928647.5570514-CDS-H-canaliculatus_F_contig10190:156..231 Hapterophycus canaliculatus Oshoro5f female CDS H-canaliculatus_F_contig10190 157..231 + 1696845512.106207-CDS-H-canaliculatus_F_contig10190:156..231 1696845512.106207-CDS-H-canaliculatus_F_contig10190:156..231 Hapterophycus canaliculatus Oshoro5f female CDS H-canaliculatus_F_contig10190 157..231 + 1622928647.5672464-CDS-H-canaliculatus_F_contig10190:516..630 1622928647.5672464-CDS-H-canaliculatus_F_contig10190:516..630 Hapterophycus canaliculatus Oshoro5f female CDS H-canaliculatus_F_contig10190 517..630 + 1696845512.118085-CDS-H-canaliculatus_F_contig10190:516..630 1696845512.118085-CDS-H-canaliculatus_F_contig10190:516..630 Hapterophycus canaliculatus Oshoro5f female CDS H-canaliculatus_F_contig10190 517..630 + 1622928647.5770493-CDS-H-canaliculatus_F_contig10190:1720..1921 1622928647.5770493-CDS-H-canaliculatus_F_contig10190:1720..1921 Hapterophycus canaliculatus Oshoro5f female CDS H-canaliculatus_F_contig10190 1721..1921 + 1696845512.127105-CDS-H-canaliculatus_F_contig10190:1720..1921 1696845512.127105-CDS-H-canaliculatus_F_contig10190:1720..1921 Hapterophycus canaliculatus Oshoro5f female CDS H-canaliculatus_F_contig10190 1721..1921 + 1622928647.586401-CDS-H-canaliculatus_F_contig10190:2372..2483 1622928647.586401-CDS-H-canaliculatus_F_contig10190:2372..2483 Hapterophycus canaliculatus Oshoro5f female CDS H-canaliculatus_F_contig10190 2373..2483 + 1696845512.1382487-CDS-H-canaliculatus_F_contig10190:2372..2483 1696845512.1382487-CDS-H-canaliculatus_F_contig10190:2372..2483 Hapterophycus canaliculatus Oshoro5f female CDS H-canaliculatus_F_contig10190 2373..2483 + 1622928647.5961967-CDS-H-canaliculatus_F_contig10190:3112..3181 1622928647.5961967-CDS-H-canaliculatus_F_contig10190:3112..3181 Hapterophycus canaliculatus Oshoro5f female CDS H-canaliculatus_F_contig10190 3113..3181 + 1696845512.1496975-CDS-H-canaliculatus_F_contig10190:3112..3181 1696845512.1496975-CDS-H-canaliculatus_F_contig10190:3112..3181 Hapterophycus canaliculatus Oshoro5f female CDS H-canaliculatus_F_contig10190 3113..3181 +
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig10190.212.1
>prot_H-canaliculatus_F_contig10190.212.1 ID=prot_H-canaliculatus_F_contig10190.212.1|Name=mRNA_H-canaliculatus_F_contig10190.212.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=190bp
RDVTERLQLLLRRAGHNLHTSAELEVVRQMKEELCYVAFNPSSEEQVKQP back to top mRNA from alignment at H-canaliculatus_F_contig10190:157..3181+
Legend: polypeptide CDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig10190.212.1 ID=mRNA_H-canaliculatus_F_contig10190.212.1|Name=mRNA_H-canaliculatus_F_contig10190.212.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3025bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10190:157..3181+ (Hapterophycus canaliculatus Oshoro5f female)AGGGATGTAACGGAGCGGCTACAACTTCTTCTCCGTAGAGCGGGGCACAA
TCTCCACACTTCCGCAGAATTGGAG GTAAAGCACGTTGGCATGGGGTCGT
TGTGAGCGGCGGTTGCAGCAGGCAAGCCAGCTGTTGTCATCGCAGCGGCG
ATGGTTGTTATCGTTGATAGCGGTGGTGCCTTCGCTCCGTTTTCGTTGCT
CCTATGCGAAGCTGGCGCCCTGGAGGTGGTGGAGTCCGGTGCGGCGAGTA
AAACCGCTGTTGCTGTCTCTTGCGGGAAGGCAGCCGCGCTCGTGTGTGGC
GTACTGCCAAGCATTCCGCTACGCTCTTCCGCGGTCCGGCCCGGCTCGAC
TCGAACTCAGGTGGTGCGCCAGATGAAGGAGGAGCTCTGCTACGTGGCGT
TTAACCCCTCCAGCGAGGAGCAAGTCAAGCAGCCCGACACGGTTTACAAG
CTTCCCGACGGCCAAACAATCAGA GTGAGGATTTTGTCTCCGTTGAAGAA
GAAAAAATGGTCGTGCAACGCGTTTTCTAGAAAAAGCGGGGTAAAGAAGC
AGCACAGATCAGGAAGGAAGGCACCTTCTTGAGGCAGGACCCGAGATTTT
GTCTTCTATCGGAAGAGTCCACGAGACAGAAGTAAAATCTTCTGAGGCAG
CGCTCGATAGGATGGTTTTGAGTTCTTGGCGTCGAGGGTGCGGTGCGCCT
CCTCGGGCCTTGTTTTTGTTGCTCTTTCGTTCGTGCTCGCGCTTTTGTTG
CGGTATCGATTTTGGAAGAAATGTGCCGTTTCGGGTCGATCCAGTCGAAA
GCGGCCATCTACTTGTACCGGAACATCTACCGCATGAGTGCCTTTTGTGC
GTCGAAGGACAAGCTTTATGACGAAGGGCCGTGTTTTGCGTCGCCCCTTG
TGCAATGAGAGCTGGCGTCGAGGCCATTCTACAGGCGGGCTACCCATGGC
ACCCACATACGTGATTTCGACGTTTGTCGAACTTTTTTCTGTCTCAGAAA
TTTTTCTGGTAGGTATCTTGTCAGTCTCCTCCCAACCCTCCGGCAGATAT
TCAGTTCGTGCGTTGTTTGCGTCTTGAAAGGTGGTAAAGGTACTCCATAC
AAAGATATCCTTTCGATGCTTCGTTTTTTCCCTGTTTTCCCTGTGGGCGA
CGAAACGGTCACGTCTCTTGGGCATGGAAAAAGCAAGTGAAAACACGCTG
CGTAGTCCGAATCTCCTGTTTATCGTAGCGATGATCAGAAACGAAATCGA
CAACGACTGCGACAAAAAAAGGTCACCCTCTCACCCCCCCTCTCTCTCTC
GTCATGGACAACGCGGAGCTGGTCACGAAGTGCGGGTAGGTTCTGCGAGA
AGTTCCAGCAACCATGCGCGACGAATGCCCCGTGAAGGACCGGAACGCCC
ACACAAGTTTGCCGGCACGCACTTGGTTATCGCCCTTTTGCCAGACACAC
ACACACACACACACACACACACACACGCACGCACGCACCACTCGCATCGG
GTGACCGAGATAACACCTGCACACGCATAACGCTACGCGTTACGCCCGCG
ATACCCCGTCCCAGGTGGGTCCCGAGCGATACCGCGCGCCCGAGTGCCTG
TTCCACCCGGAGCAGATGGGCTCGGAGTGCATGGGGGTGCACGACTGCCT
CCTCAAGGGCATCATGCGGACCGACATGGACATGCGGCGAACGCTGTTCG
GGCAGGTGGTTCTTTCTGGCGGCAGCACCCTCTTCCCCGGGTTCGGCGAC
CGCCTGCTCAACGAG GTGGGTGCGGGGGTGCAAGATGGCGACAAGAAAGC
CACGTGGGAGTTCCAAGTGTTGTTGTCGGGGTACACGTGAGAGGCACCTA
TAGAGGGGGGAAGGGGGGGGTTGATTTGGCTCTTAACGGGAGGTTAGAGG
AAGGGGCGGTGGAAGCGACGGCATCGAGCGCGTCGGCGGGTGGGAGGGCG
TTTTGGGTGAGCGCTGGAGTGAATCGGTGAGAGGGTGAGCACATGGGCAC
GTCCGCGAGCGGGGGCGCAAGAATTGAGCGATCTACTGTGGGTTGAATAT
TCTGAGGGAGCTGGGCTGAGCAACCGGGGACGACTAGGTCAGCGGACGCG
AAGTAGTGAGCGCCAGACGCTCCATTTGGTATGCAAACGTGTGATACGCG
AGATCGACCCACCCCAACACCGCGAATACTGACATCGGAAACCCCGACGA
ATGCACTCGGGAGCAGGTACGGAAACAAGCACCAAAGAACCTCAAGATCC
GCATCACAGCGCCGCCGGAACGCAAGTTCTCGACTTGGGTTGGCGGGTCC
ATCTTGGCGTCATTGGCTACCTTCAAG GTGCGCTGTTCCTTTTGGTTATG
GTGGTGAGGGTTCTGCGTTTTGCTTGTTGTTGTGACGATGGATGTGCCTG
TGTTGGTGGTTGTGGTTGTCGTGTCTGTTTGTGGGTGTTCTCCCGGTTGC
TGTTTGTGGGTGAGCTCCCGGTTGTGGTGGTTGGTCCGGCGGCTGGTCTT
TTCTTTCGTCGAGCTCATTTCGGAACCAACTCGATCGCCTGGTCCCGGAC
TGCTGGGTTTGATGCTGTTGAGACCACAGCCTACGGGTGGCTACACGTCC
CTCTGCTTGTCGAGCCCTTGGCAACTGCCTGCTTCCCAGGTTCCATTAAC
CAAGAACACGCTTGTTTGTCTGAGAACCTCCGACGGCATGCGTGGCGCTG
ATCGGTTTCATCGGTACCTCTCATGATACTTGGGTGCGATATCCCTTTCC
TCCCGAGCATGGTGACCTGTCCGCAAGCCGACACAGCTTAAGGTCACCGC
TCCCCATCATAGGAACTCCGAAACTCTGTAAGCTTTTTCCATCATTTTGG
ACGTCGAGGCCCCAATTCCTTGGGCTGGCTGGACTGTCGCCCCACACACC
CCCCCCCCCTAAACATCGCCGTTTCTTTCGCTCATCGTGCGTTGCGTCGC
CCGCAGGACATGTGGGTTACTCGCGCCGAGTTCAGAGAACACGGGCCAAG
CATCATGGACAGCAAATCTCTTTGA back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10190:157..3181+
>mRNA_H-canaliculatus_F_contig10190.212.1 ID=mRNA_H-canaliculatus_F_contig10190.212.1|Name=mRNA_H-canaliculatus_F_contig10190.212.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1140bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10190:157..3181+ (Hapterophycus canaliculatus Oshoro5f female) back to top