mRNA_H-canaliculatus_F_contig10190.212.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Homology

BLAST of mRNA_H-canaliculatus_F_contig10190.212.1 vs. uniprot
Match: D8LPW8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPW8_ECTSI)

HSP 1 Score: 371 bits (953), Expect = 3.400e-127
Identity = 181/189 (95.77%), Postives = 187/189 (98.94%), Query Frame = 1

Query:    1 RDVTERLQLLLRRAGHNLHTSAELEVVRQMKEELCYVAFNPSSEEQVKQPDTVYKLPDGQTIRVGPERYRAPECLFHPEQMGSECMGVHDCLLKGIMRTDMDMRRTLFGQVVLSGGSTLFPGFGDRLLNEVRKQAPKNLKIRITAPPERKFSTWVGGSILASLATFKDMWVTRAEFREHGPSIMDSKSL 567
            RDVTERLQLLLRRAGH+LHTSAE+EVVRQMKE+LCYVAFNPS+EEQVKQPDTVYKLPDGQ IRVGPERYRAPECLFHPEQ+GSE MGVHDCLLKGIMRTDMDMRRTLFGQVVLSGGSTLFPGFGDRLLNEVRKQAPKNLKIRITAPPERKFSTWVGGSILASLATFKDMWVTRAEFREHGP+IMDSKSL
Sbjct:  187 RDVTERLQLLLRRAGHSLHTSAEMEVVRQMKEDLCYVAFNPSTEEQVKQPDTVYKLPDGQAIRVGPERYRAPECLFHPEQLGSESMGVHDCLLKGIMRTDMDMRRTLFGQVVLSGGSTLFPGFGDRLLNEVRKQAPKNLKIRITAPPERKFSTWVGGSILASLATFKDMWVTRAEFREHGPNIMDSKSL 375

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BLAST of mRNA_H-canaliculatus_F_contig10190.212.1 vs. uniprot
Match: A0A1V9ZXS0_9STRA (Actin (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZXS0_9STRA)

HSP 1 Score: 261 bits (668), Expect = 8.950e-84
Identity = 126/199 (63.32%), Postives = 160/199 (80.40%), Query Frame = 1

Query:    1 RDVTERLQLLLRRAGHNLHTSAELEVVRQMKEELCYVAFNPSSEEQV----------KQPDTVYKLPDGQTIRVGPERYRAPECLFHPEQMGSECMGVHDCLLKGIMRTDMDMRRTLFGQVVLSGGSTLFPGFGDRLLNEVRKQAPKNLKIRITAPPERKFSTWVGGSILASLATFKDMWVTRAEFREHGPSIMDSKSL 567
            RDVT  LQLL RRAG+   TSAELE+V+++KE+LCYVAFNP+ EEQ+           Q  T Y+LPDG  + +GPE++RAPE LF P+ +GSE  GV DCL+  I+R+DMD+R+TLF Q+VLSGGSTLFPGFGDRLL+EVRK+APK++KIRI+APP R++STW+GGSILASLATFK MW+T+AE+ EHG SI+  K+L
Sbjct:  193 RDVTSYLQLLCRRAGYVFQTSAELEIVKEIKEKLCYVAFNPTKEEQLLHTSGDPQSASQISTEYRLPDGSVLNLGPEKFRAPEILFRPDLIGSEYTGVQDCLVHAILRSDMDLRKTLFSQIVLSGGSTLFPGFGDRLLSEVRKKAPKDIKIRISAPPARQYSTWIGGSILASLATFKTMWITKAEYEEHGASIVHRKTL 391

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BLAST of mRNA_H-canaliculatus_F_contig10190.212.1 vs. uniprot
Match: U6KLL3_EIMTE (Actin, putative n=1 Tax=Eimeria tenella TaxID=5802 RepID=U6KLL3_EIMTE)

HSP 1 Score: 255 bits (652), Expect = 1.690e-81
Identity = 126/193 (65.28%), Postives = 151/193 (78.24%), Query Frame = 1

Query:    1 RDVTERLQLLLRRAGHNLHTSAELEVVRQMKEELCYVAFNPSSEEQVKQPDT----VYKLPDGQTIRVGPERYRAPECLFHPEQMGSECMGVHDCLLKGIMRTDMDMRRTLFGQVVLSGGSTLFPGFGDRLLNEVRKQAPKNLKIRITAPPERKFSTWVGGSILASLATFKDMWVTRAEFREHGPSIMDSKSL 567
            RDVTERL +LLRRAGH  HTSAE E+VRQ+KE+ CYVAFNP  EE   Q  +     ++LPDG TI VG ERYRAPE LFHP  +G E  GVH+ ++  I R D+D+RRTLF Q+VL+GGST F GFGDRLLNE+RK APK++KIRI+APPERKFSTW+GGSILASL++FK MWV R E+ E GPSI+  K+L
Sbjct:  188 RDVTERLAILLRRAGHIFHTSAEFEIVRQIKEQACYVAFNPQKEEITTQDKSGGGYPFQLPDGTTISVGAERYRAPEILFHPSLVGLEYPGVHELVVNSISRADLDLRRTLFSQIVLAGGSTYFHGFGDRLLNEIRKAAPKDIKIRISAPPERKFSTWIGGSILASLSSFKKMWVPRQEYEECGPSILHRKTL 380

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BLAST of mRNA_H-canaliculatus_F_contig10190.212.1 vs. uniprot
Match: F0WRQ9_9STRA (Actinlike protein putative n=2 Tax=Albugo TaxID=65356 RepID=F0WRQ9_9STRA)

HSP 1 Score: 253 bits (647), Expect = 1.580e-80
Identity = 123/205 (60.00%), Postives = 162/205 (79.02%), Query Frame = 1

Query:    1 RDVTERLQLLLRRAGHNLHTSAELEVVRQMKEELCYVAFNPSSEEQVKQP---------------DTV-YKLPDGQTIRVGPERYRAPECLFHPEQMGSECMGVHDCLLKGIMRTDMDMRRTLFGQVVLSGGSTLFPGFGDRLLNEVRKQAPKNLKIRITAPPERKFSTWVGGSILASLATFKDMWVTRAEFREHGPSIMDSKSL 567
            RDVT++LQ LLRR+G++  TSAE E+VR++KE+LCYVAFNPS EEQ++                 DT+ Y LPDG  + +G E++RAPE LF PE +GSEC GVH+ L++ IM++DMD+R+TLF Q++LSGGSTLFPGFGDRLL EVRK APK++KIRI+APP R  STW+GGSILASLATFK+MW+T++E+ E+GPSI+  ++L
Sbjct:  193 RDVTDQLQKLLRRSGYHFQTSAEREIVREIKEKLCYVAFNPSKEEQIEADKLASAMNDPKSTSVDDTMAYYLPDGTLLNIGAEKFRAPEVLFRPELIGSECRGVHESLVQAIMKSDMDLRKTLFSQIILSGGSTLFPGFGDRLLAEVRKLAPKDIKIRISAPPTRLHSTWIGGSILASLATFKNMWITKSEYEEYGPSILHRRAL 397

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BLAST of mRNA_H-canaliculatus_F_contig10190.212.1 vs. uniprot
Match: A0A836CG82_9STRA (Actin family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG82_9STRA)

HSP 1 Score: 252 bits (644), Expect = 2.570e-80
Identity = 124/189 (65.61%), Postives = 145/189 (76.72%), Query Frame = 1

Query:    1 RDVTERLQLLLRRAGHNLHTSAELEVVRQMKEELCYVAFNPSSEEQVKQPDTVYKLPDGQTIRVGPERYRAPECLFHPEQMGSECMGVHDCLLKGIMRTDMDMRRTLFGQVVLSGGSTLFPGFGDRLLNEVRKQAPKNLKIRITAPPERKFSTWVGGSILASLATFKDMWVTRAEFREHGPSIMDSKSL 567
            RDVTERL LLL  AG  L TSAE EV RQ+KEE CYVAF+P+ EE V+  D  YKLPDGQ I +GPER+RAPE LF+P+ +GSE MG  +CL   I R DM++RR LF  VVLSGGST   GFGDRLLNE R+ AP+  KIRI APPER+ STW+GGSILASL+TF+ MWVTRAE+ EHG  IMD++ L
Sbjct:  190 RDVTERLALLLGCAGCALRTSAEREVARQIKEEACYVAFDPAKEEDVRPADVPYKLPDGQVIMLGPERFRAPEVLFNPQLIGSEAMGAAECLTTAIARADMELRRALFASVVLSGGSTCLAGFGDRLLNEARRAAPRGTKIRIAAPPERRLSTWIGGSILASLSTFRTMWVTRAEYEEHGKGIMDARGL 378

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BLAST of mRNA_H-canaliculatus_F_contig10190.212.1 vs. uniprot
Match: W7U6E6_9STRA (Arp1 actin-related protein 1 centractin beta n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U6E6_9STRA)

HSP 1 Score: 252 bits (643), Expect = 3.330e-80
Identity = 116/190 (61.05%), Postives = 160/190 (84.21%), Query Frame = 1

Query:    1 RDVTERLQLLLRRAGHNLHTSAELEVVRQMKEELCYVAFNPSSEEQVK-QPDTVYKLPDGQTIRVGPERYRAPECLFHPEQMGSECMGVHDCLLKGIMRTDMDMRRTLFGQVVLSGGSTLFPGFGDRLLNEVRKQAPKNLKIRITAPPERKFSTWVGGSILASLATFKDMWVTRAEFREHGPSIMDSKSL 567
            RDVT+ LQLLLRR+G+ LHTSAE ++VRQ+KEE CY++F+P  EE+   QPDT ++LPDG  I +G ER+RAPE LF PE +GSE  GVH+C+++ IM+ D+D+R+  FGQ+VL+GGST+FPG+GDRLLNE RK AP+++KIRI+APPERK+STW+GGSILASL+TFK +W+T+ +++EHG  I+ +++L
Sbjct:  187 RDVTDHLQLLLRRSGYKLHTSAEKDIVRQIKEEKCYLSFDPRKEEEAPPQPDT-FRLPDGTHILMGSERFRAPEILFQPELIGSEEKGVHECVIQSIMKADLDLRKAFFGQIVLAGGSTVFPGYGDRLLNETRKLAPRDVKIRISAPPERKYSTWIGGSILASLSTFKSLWITQRDYQEHGNQIVHTRTL 375

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BLAST of mRNA_H-canaliculatus_F_contig10190.212.1 vs. uniprot
Match: A0A2D4CJD5_PYTIN (Actin-like protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CJD5_PYTIN)

HSP 1 Score: 252 bits (643), Expect = 6.140e-80
Identity = 122/213 (57.28%), Postives = 160/213 (75.12%), Query Frame = 1

Query:    1 RDVTERLQLLLRRAGHNLHTSAELEVVRQMKEELCYVAFNPSSEEQVK------------------------QPDTVYKLPDGQTIRVGPERYRAPECLFHPEQMGSECMGVHDCLLKGIMRTDMDMRRTLFGQVVLSGGSTLFPGFGDRLLNEVRKQAPKNLKIRITAPPERKFSTWVGGSILASLATFKDMWVTRAEFREHGPSIMDSKSL 567
            RDVT  LQLLLRRAG+N  TSAE E+VR++KE+LCYVAFNP+ EEQ++                           + Y LPDG  + +GPE++RAPE LF PE +GSE  GVH+CL++ IM++DMD+R+TLF Q++LSGGST+FPGFGDRLL EVRK+APK++KIRI+APP R +STW+GGSILASLATFK+MW+T++E+ E+G SI+  K+ 
Sbjct:  184 RDVTAHLQLLLRRAGYNFQTSAEREIVREIKEKLCYVAFNPTKEEQLEAEKSAASVKDLLSGTKAKPVTPSSDDSSAYYLPDGTILNIGPEKFRAPEVLFRPELIGSEGGGVHECLVQAIMKSDMDLRKTLFSQIILSGGSTMFPGFGDRLLAEVRKKAPKDIKIRISAPPTRLYSTWIGGSILASLATFKNMWITKSEYEEYGASILYRKAF 396

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BLAST of mRNA_H-canaliculatus_F_contig10190.212.1 vs. uniprot
Match: A0A0G4H1C2_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4H1C2_VITBC)

HSP 1 Score: 251 bits (640), Expect = 1.130e-79
Identity = 122/193 (63.21%), Postives = 151/193 (78.24%), Query Frame = 1

Query:    1 RDVTERLQLLLRRAGHNLHTSAELEVVRQMKEELCYVAFNPSSEEQVKQPDTV----YKLPDGQTIRVGPERYRAPECLFHPEQMGSECMGVHDCLLKGIMRTDMDMRRTLFGQVVLSGGSTLFPGFGDRLLNEVRKQAPKNLKIRITAPPERKFSTWVGGSILASLATFKDMWVTRAEFREHGPSIMDSKSL 567
            RDVTE LQL LRRAGH  HTSAE+EVVRQ+KE  CYVAFNP  EE  +   T     + LPDG  I +GPER+RAPE LFHP Q+G E  G+H+ L++ I R D+D+R+TL+ Q+VLSGGST+F GFGDRLLNEVR+ APK++KIRI+APPERKFST++GG+ILASLATFK MWV++ E+ E GP I+  K+ 
Sbjct:  189 RDVTEHLQLQLRRAGHVFHTSAEMEVVRQIKESTCYVAFNPQKEEHQEHDKTSASFPFHLPDGTQILLGPERFRAPEILFHPNQVGLEYPGIHELLVQSISRADLDLRKTLYSQIVLSGGSTMFAGFGDRLLNEVRRLAPKDIKIRISAPPERKFSTYLGGAILASLATFKKMWVSKEEYEEEGPGILHKKAF 381

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BLAST of mRNA_H-canaliculatus_F_contig10190.212.1 vs. uniprot
Match: A0A5D6YMY9_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YMY9_9STRA)

HSP 1 Score: 250 bits (639), Expect = 1.790e-79
Identity = 126/216 (58.33%), Postives = 160/216 (74.07%), Query Frame = 1

Query:    1 RDVTERLQLLLRRAGHNLHTSAELEVVRQMKEELCYVAFNPSSEEQV---------KQPD------------------TVYKLPDGQTIRVGPERYRAPECLFHPEQMGSECMGVHDCLLKGIMRTDMDMRRTLFGQVVLSGGSTLFPGFGDRLLNEVRKQAPKNLKIRITAPPERKFSTWVGGSILASLATFKDMWVTRAEFREHGPSIMDSKSL 567
            RDVT +LQLLLRRAG+   TSAE EVVR++KE+LCYVAFNP+ EEQ+         K  D                  + Y LPDG  + +G E++RAPE LF PE +GSE  GV DCL++ IM++DMD+R+TLF Q++LSGGSTLFPGFGDRLL EVRK+APK++KIRI+APP R +STW+GGSILASLATFK+MW+T++E+ EHG SI+  K+L
Sbjct:  170 RDVTAQLQLLLRRAGYRFETSAEREVVREVKEKLCYVAFNPAKEEQLEAERAAVAGKDDDLLSASKAKRRAAAPTDDASAYYLPDGTLLNIGAEKFRAPEVLFRPELIGSESGGVQDCLVQAIMKSDMDLRKTLFSQIILSGGSTLFPGFGDRLLAEVRKKAPKDIKIRISAPPTRLYSTWIGGSILASLATFKNMWITKSEYEEHGASILHRKAL 385

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BLAST of mRNA_H-canaliculatus_F_contig10190.212.1 vs. uniprot
Match: K3X404_GLOUD (Uncharacterized protein n=30 Tax=Oomycota TaxID=4762 RepID=K3X404_GLOUD)

HSP 1 Score: 250 bits (638), Expect = 4.020e-79
Identity = 122/213 (57.28%), Postives = 160/213 (75.12%), Query Frame = 1

Query:    1 RDVTERLQLLLRRAGHNLHTSAELEVVRQMKEELCYVAFNPSSEEQVKQPDTV------------------------YKLPDGQTIRVGPERYRAPECLFHPEQMGSECMGVHDCLLKGIMRTDMDMRRTLFGQVVLSGGSTLFPGFGDRLLNEVRKQAPKNLKIRITAPPERKFSTWVGGSILASLATFKDMWVTRAEFREHGPSIMDSKSL 567
            RDVT  LQLLLRRAG+N  TSAE E+VR++KE+LCYVAFNP+ EEQ++   +                         Y LPDG  + +G E++RAPE LF PE +GSE  GVH+CL++ IM++DMD+R+TLF Q++LSGGST+FPGFGDRLL EVRK+APK++KIRI+APP R +STW+GGSILASLATFK+MW+T++E+ E+G SI+  K+L
Sbjct:  189 RDVTAHLQLLLRRAGYNFQTSAEREIVREIKEKLCYVAFNPAKEEQLEAEKSAIAVKDLLSSSKTKTGSAPSDDASAYYLPDGTLLNIGAEKFRAPEVLFRPEIIGSEGGGVHECLVQAIMKSDMDLRKTLFSQIILSGGSTMFPGFGDRLLAEVRKKAPKDIKIRISAPPTRLYSTWIGGSILASLATFKNMWITKSEYEEYGASILHRKAL 401

The following BLAST results are available for this feature:

BLAST of mRNA_H-canaliculatus_F_contig10190.212.1 vs. uniprot

BLAST of mRNA_H-canaliculatus_F_contig10190.212.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25

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POSITION

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Match Name	E-value	Identity	Description
D8LPW8_ECTSI	3.400e-127	95.77	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A1V9ZXS0_9STRA	8.950e-84	63.32	Actin (Fragment) n=1 Tax=Thraustotheca clavata Tax...	[more]
U6KLL3_EIMTE	1.690e-81	65.28	Actin, putative n=1 Tax=Eimeria tenella TaxID=5802...	[more]
F0WRQ9_9STRA	1.580e-80	60.00	Actinlike protein putative n=2 Tax=Albugo TaxID=65...	[more]
A0A836CG82_9STRA	2.570e-80	65.61	Actin family n=1 Tax=Tribonema minus TaxID=303371 ...	[more]
W7U6E6_9STRA	3.330e-80	61.05	Arp1 actin-related protein 1 centractin beta n=1 T...	[more]
A0A2D4CJD5_PYTIN	6.140e-80	57.28	Actin-like protein n=1 Tax=Pythium insidiosum TaxI...	[more]
A0A0G4H1C2_VITBC	1.130e-79	63.21	Uncharacterized protein n=2 Tax=Vitrella brassicaf...	[more]
A0A5D6YMY9_9STRA	1.790e-79	58.33	Uncharacterized protein n=1 Tax=Pythium brassicum ...	[more]
K3X404_GLOUD	4.020e-79	57.28	Uncharacterized protein n=30 Tax=Oomycota TaxID=47...	[more]

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Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	372.9
Seed ortholog evalue	9.2e-101
Seed eggNOG ortholog	2880.D8LPW8
Preferred name	ACTR1A
KEGG ko	ko:K16575
GOs	GO:0000003,GO:0000086,GO:0000278,GO:0001775,GO:0002177,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0002478,GO:0002495,GO:0002504,GO:0003674,GO:0003824,GO:0005198,GO:0005200,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005798,GO:0005813,GO:0005814,GO:0005815,GO:0005829,GO:0005856,GO:0005869,GO:0005875,GO:0005884,GO:0005938,GO:0006793,GO:0006796,GO:0006810,GO:0006887,GO:0006888,GO:0006928,GO:0006955,GO:0006996,GO:0007010,GO:0007017,GO:0007018,GO:0007049,GO:0007276,GO:0007283,GO:0007346,GO:0008088,GO:0008089,GO:0008090,GO:0008150,GO:0008152,GO:0008976,GO:0009987,GO:0010389,GO:0010564,GO:0010970,GO:0012505,GO:0015629,GO:0015630,GO:0016043,GO:0016192,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0019882,GO:0019884,GO:0019886,GO:0019896,GO:0019953,GO:0022402,GO:0022406,GO:0022414,GO:0022607,GO:0030030,GO:0030031,GO:0030135,GO:0030137,GO:0030141,GO:0030705,GO:0031410,GO:0031974,GO:0031982,GO:0031983,GO:0032501,GO:0032504,GO:0032940,GO:0032991,GO:0034643,GO:0034774,GO:0036230,GO:0042119,GO:0043209,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043232,GO:0043233,GO:0043299,GO:0043312,GO:0044085,GO:0044237,GO:0044422,GO:0044424,GO:0044430,GO:0044433,GO:0044444,GO:0044446,GO:0044448,GO:0044450,GO:0044464,GO:0044703,GO:0044770,GO:0044772,GO:0044782,GO:0044839,GO:0045055,GO:0045321,GO:0046903,GO:0046907,GO:0047497,GO:0048002,GO:0048193,GO:0048232,GO:0048609,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051234,GO:0051640,GO:0051641,GO:0051646,GO:0051649,GO:0051654,GO:0051656,GO:0051704,GO:0051726,GO:0060205,GO:0060271,GO:0065007,GO:0070013,GO:0070925,GO:0071840,GO:0071944,GO:0072384,GO:0097708,GO:0097711,GO:0098930,GO:0099080,GO:0099081,GO:0099111,GO:0099503,GO:0099512,GO:0099513,GO:0099568,GO:0099738,GO:0101002,GO:0120031,GO:0120036,GO:0140056,GO:1901987,GO:1901990,GO:1902749,GO:1903047,GO:1904813
EggNOG free text desc.	cytoskeleton organization
EggNOG OGs	COG5277@1,KOG0676@2759
COG Functional cat.	Z
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko03036,ko04147,ko04812
Hectar predicted targeting category	other localisation
Ec32 ortholog description	Actin family
Ec32 ortholog	Ec-15_001860.1
Exons	5
Model size	570
Cds size	570
Stop	1
Start	0