mRNA_H-canaliculatus_F_contig10190.212.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_H-canaliculatus_F_contig10190.212.1
Unique Name	mRNA_H-canaliculatus_F_contig10190.212.1
Type	mRNA
Organism	Hapterophycus canaliculatus Oshoro5f female (Hapterophycus canaliculatus Oshoro5f female)

Homology

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BLAST of mRNA_H-canaliculatus_F_contig10190.212.1 vs. uniprot
Match: D8LPW8_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPW8_ECTSI)

HSP 1 Score: 371 bits (953), Expect = 3.400e-127
Identity = 181/189 (95.77%), Postives = 187/189 (98.94%), Query Frame = 1

Query:    1 RDVTERLQLLLRRAGHNLHTSAELEVVRQMKEELCYVAFNPSSEEQVKQPDTVYKLPDGQTIRVGPERYRAPECLFHPEQMGSECMGVHDCLLKGIMRTDMDMRRTLFGQVVLSGGSTLFPGFGDRLLNEVRKQAPKNLKIRITAPPERKFSTWVGGSILASLATFKDMWVTRAEFREHGPSIMDSKSL 567
            RDVTERLQLLLRRAGH+LHTSAE+EVVRQMKE+LCYVAFNPS+EEQVKQPDTVYKLPDGQ IRVGPERYRAPECLFHPEQ+GSE MGVHDCLLKGIMRTDMDMRRTLFGQVVLSGGSTLFPGFGDRLLNEVRKQAPKNLKIRITAPPERKFSTWVGGSILASLATFKDMWVTRAEFREHGP+IMDSKSL
Sbjct:  187 RDVTERLQLLLRRAGHSLHTSAEMEVVRQMKEDLCYVAFNPSTEEQVKQPDTVYKLPDGQAIRVGPERYRAPECLFHPEQLGSESMGVHDCLLKGIMRTDMDMRRTLFGQVVLSGGSTLFPGFGDRLLNEVRKQAPKNLKIRITAPPERKFSTWVGGSILASLATFKDMWVTRAEFREHGPNIMDSKSL 375

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BLAST of mRNA_H-canaliculatus_F_contig10190.212.1 vs. uniprot
Match: A0A1V9ZXS0_9STRA (Actin (Fragment) n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZXS0_9STRA)

HSP 1 Score: 261 bits (668), Expect = 8.950e-84
Identity = 126/199 (63.32%), Postives = 160/199 (80.40%), Query Frame = 1

Query:    1 RDVTERLQLLLRRAGHNLHTSAELEVVRQMKEELCYVAFNPSSEEQV----------KQPDTVYKLPDGQTIRVGPERYRAPECLFHPEQMGSECMGVHDCLLKGIMRTDMDMRRTLFGQVVLSGGSTLFPGFGDRLLNEVRKQAPKNLKIRITAPPERKFSTWVGGSILASLATFKDMWVTRAEFREHGPSIMDSKSL 567
            RDVT  LQLL RRAG+   TSAELE+V+++KE+LCYVAFNP+ EEQ+           Q  T Y+LPDG  + +GPE++RAPE LF P+ +GSE  GV DCL+  I+R+DMD+R+TLF Q+VLSGGSTLFPGFGDRLL+EVRK+APK++KIRI+APP R++STW+GGSILASLATFK MW+T+AE+ EHG SI+  K+L
Sbjct:  193 RDVTSYLQLLCRRAGYVFQTSAELEIVKEIKEKLCYVAFNPTKEEQLLHTSGDPQSASQISTEYRLPDGSVLNLGPEKFRAPEILFRPDLIGSEYTGVQDCLVHAILRSDMDLRKTLFSQIVLSGGSTLFPGFGDRLLSEVRKKAPKDIKIRISAPPARQYSTWIGGSILASLATFKTMWITKAEYEEHGASIVHRKTL 391

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BLAST of mRNA_H-canaliculatus_F_contig10190.212.1 vs. uniprot
Match: U6KLL3_EIMTE (Actin, putative n=1 Tax=Eimeria tenella TaxID=5802 RepID=U6KLL3_EIMTE)

HSP 1 Score: 255 bits (652), Expect = 1.690e-81
Identity = 126/193 (65.28%), Postives = 151/193 (78.24%), Query Frame = 1

Query:    1 RDVTERLQLLLRRAGHNLHTSAELEVVRQMKEELCYVAFNPSSEEQVKQPDT----VYKLPDGQTIRVGPERYRAPECLFHPEQMGSECMGVHDCLLKGIMRTDMDMRRTLFGQVVLSGGSTLFPGFGDRLLNEVRKQAPKNLKIRITAPPERKFSTWVGGSILASLATFKDMWVTRAEFREHGPSIMDSKSL 567
            RDVTERL +LLRRAGH  HTSAE E+VRQ+KE+ CYVAFNP  EE   Q  +     ++LPDG TI VG ERYRAPE LFHP  +G E  GVH+ ++  I R D+D+RRTLF Q+VL+GGST F GFGDRLLNE+RK APK++KIRI+APPERKFSTW+GGSILASL++FK MWV R E+ E GPSI+  K+L
Sbjct:  188 RDVTERLAILLRRAGHIFHTSAEFEIVRQIKEQACYVAFNPQKEEITTQDKSGGGYPFQLPDGTTISVGAERYRAPEILFHPSLVGLEYPGVHELVVNSISRADLDLRRTLFSQIVLAGGSTYFHGFGDRLLNEIRKAAPKDIKIRISAPPERKFSTWIGGSILASLSSFKKMWVPRQEYEECGPSILHRKTL 380

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BLAST of mRNA_H-canaliculatus_F_contig10190.212.1 vs. uniprot
Match: F0WRQ9_9STRA (Actinlike protein putative n=2 Tax=Albugo TaxID=65356 RepID=F0WRQ9_9STRA)

HSP 1 Score: 253 bits (647), Expect = 1.580e-80
Identity = 123/205 (60.00%), Postives = 162/205 (79.02%), Query Frame = 1

Query:    1 RDVTERLQLLLRRAGHNLHTSAELEVVRQMKEELCYVAFNPSSEEQVKQP---------------DTV-YKLPDGQTIRVGPERYRAPECLFHPEQMGSECMGVHDCLLKGIMRTDMDMRRTLFGQVVLSGGSTLFPGFGDRLLNEVRKQAPKNLKIRITAPPERKFSTWVGGSILASLATFKDMWVTRAEFREHGPSIMDSKSL 567
            RDVT++LQ LLRR+G++  TSAE E+VR++KE+LCYVAFNPS EEQ++                 DT+ Y LPDG  + +G E++RAPE LF PE +GSEC GVH+ L++ IM++DMD+R+TLF Q++LSGGSTLFPGFGDRLL EVRK APK++KIRI+APP R  STW+GGSILASLATFK+MW+T++E+ E+GPSI+  ++L
Sbjct:  193 RDVTDQLQKLLRRSGYHFQTSAEREIVREIKEKLCYVAFNPSKEEQIEADKLASAMNDPKSTSVDDTMAYYLPDGTLLNIGAEKFRAPEVLFRPELIGSECRGVHESLVQAIMKSDMDLRKTLFSQIILSGGSTLFPGFGDRLLAEVRKLAPKDIKIRISAPPTRLHSTWIGGSILASLATFKNMWITKSEYEEYGPSILHRRAL 397

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BLAST of mRNA_H-canaliculatus_F_contig10190.212.1 vs. uniprot
Match: A0A836CG82_9STRA (Actin family n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CG82_9STRA)

HSP 1 Score: 252 bits (644), Expect = 2.570e-80
Identity = 124/189 (65.61%), Postives = 145/189 (76.72%), Query Frame = 1

Query:    1 RDVTERLQLLLRRAGHNLHTSAELEVVRQMKEELCYVAFNPSSEEQVKQPDTVYKLPDGQTIRVGPERYRAPECLFHPEQMGSECMGVHDCLLKGIMRTDMDMRRTLFGQVVLSGGSTLFPGFGDRLLNEVRKQAPKNLKIRITAPPERKFSTWVGGSILASLATFKDMWVTRAEFREHGPSIMDSKSL 567
            RDVTERL LLL  AG  L TSAE EV RQ+KEE CYVAF+P+ EE V+  D  YKLPDGQ I +GPER+RAPE LF+P+ +GSE MG  +CL   I R DM++RR LF  VVLSGGST   GFGDRLLNE R+ AP+  KIRI APPER+ STW+GGSILASL+TF+ MWVTRAE+ EHG  IMD++ L
Sbjct:  190 RDVTERLALLLGCAGCALRTSAEREVARQIKEEACYVAFDPAKEEDVRPADVPYKLPDGQVIMLGPERFRAPEVLFNPQLIGSEAMGAAECLTTAIARADMELRRALFASVVLSGGSTCLAGFGDRLLNEARRAAPRGTKIRIAAPPERRLSTWIGGSILASLSTFRTMWVTRAEYEEHGKGIMDARGL 378

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BLAST of mRNA_H-canaliculatus_F_contig10190.212.1 vs. uniprot
Match: W7U6E6_9STRA (Arp1 actin-related protein 1 centractin beta n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7U6E6_9STRA)

HSP 1 Score: 252 bits (643), Expect = 3.330e-80
Identity = 116/190 (61.05%), Postives = 160/190 (84.21%), Query Frame = 1

Query:    1 RDVTERLQLLLRRAGHNLHTSAELEVVRQMKEELCYVAFNPSSEEQVK-QPDTVYKLPDGQTIRVGPERYRAPECLFHPEQMGSECMGVHDCLLKGIMRTDMDMRRTLFGQVVLSGGSTLFPGFGDRLLNEVRKQAPKNLKIRITAPPERKFSTWVGGSILASLATFKDMWVTRAEFREHGPSIMDSKSL 567
            RDVT+ LQLLLRR+G+ LHTSAE ++VRQ+KEE CY++F+P  EE+   QPDT ++LPDG  I +G ER+RAPE LF PE +GSE  GVH+C+++ IM+ D+D+R+  FGQ+VL+GGST+FPG+GDRLLNE RK AP+++KIRI+APPERK+STW+GGSILASL+TFK +W+T+ +++EHG  I+ +++L
Sbjct:  187 RDVTDHLQLLLRRSGYKLHTSAEKDIVRQIKEEKCYLSFDPRKEEEAPPQPDT-FRLPDGTHILMGSERFRAPEILFQPELIGSEEKGVHECVIQSIMKADLDLRKAFFGQIVLAGGSTVFPGYGDRLLNETRKLAPRDVKIRISAPPERKYSTWIGGSILASLSTFKSLWITQRDYQEHGNQIVHTRTL 375

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BLAST of mRNA_H-canaliculatus_F_contig10190.212.1 vs. uniprot
Match: A0A2D4CJD5_PYTIN (Actin-like protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4CJD5_PYTIN)

HSP 1 Score: 252 bits (643), Expect = 6.140e-80
Identity = 122/213 (57.28%), Postives = 160/213 (75.12%), Query Frame = 1

Query:    1 RDVTERLQLLLRRAGHNLHTSAELEVVRQMKEELCYVAFNPSSEEQVK------------------------QPDTVYKLPDGQTIRVGPERYRAPECLFHPEQMGSECMGVHDCLLKGIMRTDMDMRRTLFGQVVLSGGSTLFPGFGDRLLNEVRKQAPKNLKIRITAPPERKFSTWVGGSILASLATFKDMWVTRAEFREHGPSIMDSKSL 567
            RDVT  LQLLLRRAG+N  TSAE E+VR++KE+LCYVAFNP+ EEQ++                           + Y LPDG  + +GPE++RAPE LF PE +GSE  GVH+CL++ IM++DMD+R+TLF Q++LSGGST+FPGFGDRLL EVRK+APK++KIRI+APP R +STW+GGSILASLATFK+MW+T++E+ E+G SI+  K+ 
Sbjct:  184 RDVTAHLQLLLRRAGYNFQTSAEREIVREIKEKLCYVAFNPTKEEQLEAEKSAASVKDLLSGTKAKPVTPSSDDSSAYYLPDGTILNIGPEKFRAPEVLFRPELIGSEGGGVHECLVQAIMKSDMDLRKTLFSQIILSGGSTMFPGFGDRLLAEVRKKAPKDIKIRISAPPTRLYSTWIGGSILASLATFKNMWITKSEYEEYGASILYRKAF 396

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BLAST of mRNA_H-canaliculatus_F_contig10190.212.1 vs. uniprot
Match: A0A0G4H1C2_VITBC (Uncharacterized protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4H1C2_VITBC)

HSP 1 Score: 251 bits (640), Expect = 1.130e-79
Identity = 122/193 (63.21%), Postives = 151/193 (78.24%), Query Frame = 1

Query:    1 RDVTERLQLLLRRAGHNLHTSAELEVVRQMKEELCYVAFNPSSEEQVKQPDTV----YKLPDGQTIRVGPERYRAPECLFHPEQMGSECMGVHDCLLKGIMRTDMDMRRTLFGQVVLSGGSTLFPGFGDRLLNEVRKQAPKNLKIRITAPPERKFSTWVGGSILASLATFKDMWVTRAEFREHGPSIMDSKSL 567
            RDVTE LQL LRRAGH  HTSAE+EVVRQ+KE  CYVAFNP  EE  +   T     + LPDG  I +GPER+RAPE LFHP Q+G E  G+H+ L++ I R D+D+R+TL+ Q+VLSGGST+F GFGDRLLNEVR+ APK++KIRI+APPERKFST++GG+ILASLATFK MWV++ E+ E GP I+  K+ 
Sbjct:  189 RDVTEHLQLQLRRAGHVFHTSAEMEVVRQIKESTCYVAFNPQKEEHQEHDKTSASFPFHLPDGTQILLGPERFRAPEILFHPNQVGLEYPGIHELLVQSISRADLDLRKTLYSQIVLSGGSTMFAGFGDRLLNEVRRLAPKDIKIRISAPPERKFSTYLGGAILASLATFKKMWVSKEEYEEEGPGILHKKAF 381

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BLAST of mRNA_H-canaliculatus_F_contig10190.212.1 vs. uniprot
Match: A0A5D6YMY9_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YMY9_9STRA)

HSP 1 Score: 250 bits (639), Expect = 1.790e-79
Identity = 126/216 (58.33%), Postives = 160/216 (74.07%), Query Frame = 1

Query:    1 RDVTERLQLLLRRAGHNLHTSAELEVVRQMKEELCYVAFNPSSEEQV---------KQPD------------------TVYKLPDGQTIRVGPERYRAPECLFHPEQMGSECMGVHDCLLKGIMRTDMDMRRTLFGQVVLSGGSTLFPGFGDRLLNEVRKQAPKNLKIRITAPPERKFSTWVGGSILASLATFKDMWVTRAEFREHGPSIMDSKSL 567
            RDVT +LQLLLRRAG+   TSAE EVVR++KE+LCYVAFNP+ EEQ+         K  D                  + Y LPDG  + +G E++RAPE LF PE +GSE  GV DCL++ IM++DMD+R+TLF Q++LSGGSTLFPGFGDRLL EVRK+APK++KIRI+APP R +STW+GGSILASLATFK+MW+T++E+ EHG SI+  K+L
Sbjct:  170 RDVTAQLQLLLRRAGYRFETSAEREVVREVKEKLCYVAFNPAKEEQLEAERAAVAGKDDDLLSASKAKRRAAAPTDDASAYYLPDGTLLNIGAEKFRAPEVLFRPELIGSESGGVQDCLVQAIMKSDMDLRKTLFSQIILSGGSTLFPGFGDRLLAEVRKKAPKDIKIRISAPPTRLYSTWIGGSILASLATFKNMWITKSEYEEHGASILHRKAL 385

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BLAST of mRNA_H-canaliculatus_F_contig10190.212.1 vs. uniprot
Match: K3X404_GLOUD (Uncharacterized protein n=30 Tax=Oomycota TaxID=4762 RepID=K3X404_GLOUD)

HSP 1 Score: 250 bits (638), Expect = 4.020e-79
Identity = 122/213 (57.28%), Postives = 160/213 (75.12%), Query Frame = 1

Query:    1 RDVTERLQLLLRRAGHNLHTSAELEVVRQMKEELCYVAFNPSSEEQVKQPDTV------------------------YKLPDGQTIRVGPERYRAPECLFHPEQMGSECMGVHDCLLKGIMRTDMDMRRTLFGQVVLSGGSTLFPGFGDRLLNEVRKQAPKNLKIRITAPPERKFSTWVGGSILASLATFKDMWVTRAEFREHGPSIMDSKSL 567
            RDVT  LQLLLRRAG+N  TSAE E+VR++KE+LCYVAFNP+ EEQ++   +                         Y LPDG  + +G E++RAPE LF PE +GSE  GVH+CL++ IM++DMD+R+TLF Q++LSGGST+FPGFGDRLL EVRK+APK++KIRI+APP R +STW+GGSILASLATFK+MW+T++E+ E+G SI+  K+L
Sbjct:  189 RDVTAHLQLLLRRAGYNFQTSAEREIVREIKEKLCYVAFNPAKEEQLEAEKSAIAVKDLLSSSKTKTGSAPSDDASAYYLPDGTLLNIGAEKFRAPEVLFRPEIIGSEGGGVHECLVQAIMKSDMDLRKTLFSQIILSGGSTMFPGFGDRLLAEVRKKAPKDIKIRISAPPTRLYSTWIGGSILASLATFKNMWITKSEYEEYGASILHRKAL 401

The following BLAST results are available for this feature:

BLAST of mRNA_H-canaliculatus_F_contig10190.212.1 vs. uniprot

BLAST of mRNA_H-canaliculatus_F_contig10190.212.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90)
Total hits: 25

ZOOM

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POSITION

0


Match Name	E-value	Identity	Description
D8LPW8_ECTSI	3.400e-127	95.77	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A1V9ZXS0_9STRA	8.950e-84	63.32	Actin (Fragment) n=1 Tax=Thraustotheca clavata Tax...	[more]
U6KLL3_EIMTE	1.690e-81	65.28	Actin, putative n=1 Tax=Eimeria tenella TaxID=5802...	[more]
F0WRQ9_9STRA	1.580e-80	60.00	Actinlike protein putative n=2 Tax=Albugo TaxID=65...	[more]
A0A836CG82_9STRA	2.570e-80	65.61	Actin family n=1 Tax=Tribonema minus TaxID=303371 ...	[more]
W7U6E6_9STRA	3.330e-80	61.05	Arp1 actin-related protein 1 centractin beta n=1 T...	[more]
A0A2D4CJD5_PYTIN	6.140e-80	57.28	Actin-like protein n=1 Tax=Pythium insidiosum TaxI...	[more]
A0A0G4H1C2_VITBC	1.130e-79	63.21	Uncharacterized protein n=2 Tax=Vitrella brassicaf...	[more]
A0A5D6YMY9_9STRA	1.790e-79	58.33	Uncharacterized protein n=1 Tax=Pythium brassicum ...	[more]
K3X404_GLOUD	4.020e-79	57.28	Uncharacterized protein n=30 Tax=Oomycota TaxID=47...	[more]

Pages

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	372.9
Seed ortholog evalue	9.2e-101
Seed eggNOG ortholog	2880.D8LPW8
Preferred name	ACTR1A
KEGG ko	ko:K16575
GOs	GO:0000003,GO:0000086,GO:0000278,GO:0001775,GO:0002177,GO:0002252,GO:0002263,GO:0002274,GO:0002275,GO:0002283,GO:0002366,GO:0002376,GO:0002443,GO:0002444,GO:0002446,GO:0002478,GO:0002495,GO:0002504,GO:0003674,GO:0003824,GO:0005198,GO:0005200,GO:0005575,GO:0005576,GO:0005622,GO:0005623,GO:0005737,GO:0005798,GO:0005813,GO:0005814,GO:0005815,GO:0005829,GO:0005856,GO:0005869,GO:0005875,GO:0005884,GO:0005938,GO:0006793,GO:0006796,GO:0006810,GO:0006887,GO:0006888,GO:0006928,GO:0006955,GO:0006996,GO:0007010,GO:0007017,GO:0007018,GO:0007049,GO:0007276,GO:0007283,GO:0007346,GO:0008088,GO:0008089,GO:0008090,GO:0008150,GO:0008152,GO:0008976,GO:0009987,GO:0010389,GO:0010564,GO:0010970,GO:0012505,GO:0015629,GO:0015630,GO:0016043,GO:0016192,GO:0016301,GO:0016310,GO:0016740,GO:0016772,GO:0016776,GO:0019882,GO:0019884,GO:0019886,GO:0019896,GO:0019953,GO:0022402,GO:0022406,GO:0022414,GO:0022607,GO:0030030,GO:0030031,GO:0030135,GO:0030137,GO:0030141,GO:0030705,GO:0031410,GO:0031974,GO:0031982,GO:0031983,GO:0032501,GO:0032504,GO:0032940,GO:0032991,GO:0034643,GO:0034774,GO:0036230,GO:0042119,GO:0043209,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043232,GO:0043233,GO:0043299,GO:0043312,GO:0044085,GO:0044237,GO:0044422,GO:0044424,GO:0044430,GO:0044433,GO:0044444,GO:0044446,GO:0044448,GO:0044450,GO:0044464,GO:0044703,GO:0044770,GO:0044772,GO:0044782,GO:0044839,GO:0045055,GO:0045321,GO:0046903,GO:0046907,GO:0047497,GO:0048002,GO:0048193,GO:0048232,GO:0048609,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051234,GO:0051640,GO:0051641,GO:0051646,GO:0051649,GO:0051654,GO:0051656,GO:0051704,GO:0051726,GO:0060205,GO:0060271,GO:0065007,GO:0070013,GO:0070925,GO:0071840,GO:0071944,GO:0072384,GO:0097708,GO:0097711,GO:0098930,GO:0099080,GO:0099081,GO:0099111,GO:0099503,GO:0099512,GO:0099513,GO:0099568,GO:0099738,GO:0101002,GO:0120031,GO:0120036,GO:0140056,GO:1901987,GO:1901990,GO:1902749,GO:1903047,GO:1904813
EggNOG free text desc.	cytoskeleton organization
EggNOG OGs	COG5277@1,KOG0676@2759
COG Functional cat.	Z
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
BRITE	ko00000,ko03036,ko04147,ko04812
Hectar predicted targeting category	other localisation
Ec32 ortholog description	Actin family
Ec32 ortholog	Ec-15_001860.1
Exons	5
Model size	570
Cds size	570
Stop	1
Start	0

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_H-canaliculatus_F_contig10190.212.1	prot_H-canaliculatus_F_contig10190.212.1	Hapterophycus canaliculatus Oshoro5f female	polypeptide	H-canaliculatus_F_contig10190 157..3181 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622928647.5570514-CDS-H-canaliculatus_F_contig10190:156..231	1622928647.5570514-CDS-H-canaliculatus_F_contig10190:156..231	Hapterophycus canaliculatus Oshoro5f female	CDS	H-canaliculatus_F_contig10190 157..231 +
1696845512.106207-CDS-H-canaliculatus_F_contig10190:156..231	1696845512.106207-CDS-H-canaliculatus_F_contig10190:156..231	Hapterophycus canaliculatus Oshoro5f female	CDS	H-canaliculatus_F_contig10190 157..231 +
1622928647.5672464-CDS-H-canaliculatus_F_contig10190:516..630	1622928647.5672464-CDS-H-canaliculatus_F_contig10190:516..630	Hapterophycus canaliculatus Oshoro5f female	CDS	H-canaliculatus_F_contig10190 517..630 +
1696845512.118085-CDS-H-canaliculatus_F_contig10190:516..630	1696845512.118085-CDS-H-canaliculatus_F_contig10190:516..630	Hapterophycus canaliculatus Oshoro5f female	CDS	H-canaliculatus_F_contig10190 517..630 +
1622928647.5770493-CDS-H-canaliculatus_F_contig10190:1720..1921	1622928647.5770493-CDS-H-canaliculatus_F_contig10190:1720..1921	Hapterophycus canaliculatus Oshoro5f female	CDS	H-canaliculatus_F_contig10190 1721..1921 +
1696845512.127105-CDS-H-canaliculatus_F_contig10190:1720..1921	1696845512.127105-CDS-H-canaliculatus_F_contig10190:1720..1921	Hapterophycus canaliculatus Oshoro5f female	CDS	H-canaliculatus_F_contig10190 1721..1921 +
1622928647.586401-CDS-H-canaliculatus_F_contig10190:2372..2483	1622928647.586401-CDS-H-canaliculatus_F_contig10190:2372..2483	Hapterophycus canaliculatus Oshoro5f female	CDS	H-canaliculatus_F_contig10190 2373..2483 +
1696845512.1382487-CDS-H-canaliculatus_F_contig10190:2372..2483	1696845512.1382487-CDS-H-canaliculatus_F_contig10190:2372..2483	Hapterophycus canaliculatus Oshoro5f female	CDS	H-canaliculatus_F_contig10190 2373..2483 +
1622928647.5961967-CDS-H-canaliculatus_F_contig10190:3112..3181	1622928647.5961967-CDS-H-canaliculatus_F_contig10190:3112..3181	Hapterophycus canaliculatus Oshoro5f female	CDS	H-canaliculatus_F_contig10190 3113..3181 +
1696845512.1496975-CDS-H-canaliculatus_F_contig10190:3112..3181	1696845512.1496975-CDS-H-canaliculatus_F_contig10190:3112..3181	Hapterophycus canaliculatus Oshoro5f female	CDS	H-canaliculatus_F_contig10190 3113..3181 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at H-canaliculatus_F_contig10190:157..3181+
coding sequence from alignment at H-canaliculatus_F_contig10190:157..3181+

protein sequence of mRNA_H-canaliculatus_F_contig10190.212.1

>prot_H-canaliculatus_F_contig10190.212.1 ID=prot_H-canaliculatus_F_contig10190.212.1|Name=mRNA_H-canaliculatus_F_contig10190.212.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=190bp
RDVTERLQLLLRRAGHNLHTSAELEVVRQMKEELCYVAFNPSSEEQVKQP
DTVYKLPDGQTIRVGPERYRAPECLFHPEQMGSECMGVHDCLLKGIMRTD
MDMRRTLFGQVVLSGGSTLFPGFGDRLLNEVRKQAPKNLKIRITAPPERK
FSTWVGGSILASLATFKDMWVTRAEFREHGPSIMDSKSL*

mRNA from alignment at H-canaliculatus_F_contig10190:157..3181+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_H-canaliculatus_F_contig10190.212.1 ID=mRNA_H-canaliculatus_F_contig10190.212.1|Name=mRNA_H-canaliculatus_F_contig10190.212.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=3025bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10190:157..3181+ (Hapterophycus canaliculatus Oshoro5f female)
AGGGATGTAACGGAGCGGCTACAACTTCTTCTCCGTAGAGCGGGGCACAA
TCTCCACACTTCCGCAGAATTGGAGGTAAAGCACGTTGGCATGGGGTCGT
TGTGAGCGGCGGTTGCAGCAGGCAAGCCAGCTGTTGTCATCGCAGCGGCG
ATGGTTGTTATCGTTGATAGCGGTGGTGCCTTCGCTCCGTTTTCGTTGCT
CCTATGCGAAGCTGGCGCCCTGGAGGTGGTGGAGTCCGGTGCGGCGAGTA
AAACCGCTGTTGCTGTCTCTTGCGGGAAGGCAGCCGCGCTCGTGTGTGGC
GTACTGCCAAGCATTCCGCTACGCTCTTCCGCGGTCCGGCCCGGCTCGAC
TCGAACTCAGGTGGTGCGCCAGATGAAGGAGGAGCTCTGCTACGTGGCGT
TTAACCCCTCCAGCGAGGAGCAAGTCAAGCAGCCCGACACGGTTTACAAG
CTTCCCGACGGCCAAACAATCAGAGTGAGGATTTTGTCTCCGTTGAAGAA
GAAAAAATGGTCGTGCAACGCGTTTTCTAGAAAAAGCGGGGTAAAGAAGC
AGCACAGATCAGGAAGGAAGGCACCTTCTTGAGGCAGGACCCGAGATTTT
GTCTTCTATCGGAAGAGTCCACGAGACAGAAGTAAAATCTTCTGAGGCAG
CGCTCGATAGGATGGTTTTGAGTTCTTGGCGTCGAGGGTGCGGTGCGCCT
CCTCGGGCCTTGTTTTTGTTGCTCTTTCGTTCGTGCTCGCGCTTTTGTTG
CGGTATCGATTTTGGAAGAAATGTGCCGTTTCGGGTCGATCCAGTCGAAA
GCGGCCATCTACTTGTACCGGAACATCTACCGCATGAGTGCCTTTTGTGC
GTCGAAGGACAAGCTTTATGACGAAGGGCCGTGTTTTGCGTCGCCCCTTG
TGCAATGAGAGCTGGCGTCGAGGCCATTCTACAGGCGGGCTACCCATGGC
ACCCACATACGTGATTTCGACGTTTGTCGAACTTTTTTCTGTCTCAGAAA
TTTTTCTGGTAGGTATCTTGTCAGTCTCCTCCCAACCCTCCGGCAGATAT
TCAGTTCGTGCGTTGTTTGCGTCTTGAAAGGTGGTAAAGGTACTCCATAC
AAAGATATCCTTTCGATGCTTCGTTTTTTCCCTGTTTTCCCTGTGGGCGA
CGAAACGGTCACGTCTCTTGGGCATGGAAAAAGCAAGTGAAAACACGCTG
CGTAGTCCGAATCTCCTGTTTATCGTAGCGATGATCAGAAACGAAATCGA
CAACGACTGCGACAAAAAAAGGTCACCCTCTCACCCCCCCTCTCTCTCTC
GTCATGGACAACGCGGAGCTGGTCACGAAGTGCGGGTAGGTTCTGCGAGA
AGTTCCAGCAACCATGCGCGACGAATGCCCCGTGAAGGACCGGAACGCCC
ACACAAGTTTGCCGGCACGCACTTGGTTATCGCCCTTTTGCCAGACACAC
ACACACACACACACACACACACACACGCACGCACGCACCACTCGCATCGG
GTGACCGAGATAACACCTGCACACGCATAACGCTACGCGTTACGCCCGCG
ATACCCCGTCCCAGGTGGGTCCCGAGCGATACCGCGCGCCCGAGTGCCTG
TTCCACCCGGAGCAGATGGGCTCGGAGTGCATGGGGGTGCACGACTGCCT
CCTCAAGGGCATCATGCGGACCGACATGGACATGCGGCGAACGCTGTTCG
GGCAGGTGGTTCTTTCTGGCGGCAGCACCCTCTTCCCCGGGTTCGGCGAC
CGCCTGCTCAACGAGGTGGGTGCGGGGGTGCAAGATGGCGACAAGAAAGC
CACGTGGGAGTTCCAAGTGTTGTTGTCGGGGTACACGTGAGAGGCACCTA
TAGAGGGGGGAAGGGGGGGGTTGATTTGGCTCTTAACGGGAGGTTAGAGG
AAGGGGCGGTGGAAGCGACGGCATCGAGCGCGTCGGCGGGTGGGAGGGCG
TTTTGGGTGAGCGCTGGAGTGAATCGGTGAGAGGGTGAGCACATGGGCAC
GTCCGCGAGCGGGGGCGCAAGAATTGAGCGATCTACTGTGGGTTGAATAT
TCTGAGGGAGCTGGGCTGAGCAACCGGGGACGACTAGGTCAGCGGACGCG
AAGTAGTGAGCGCCAGACGCTCCATTTGGTATGCAAACGTGTGATACGCG
AGATCGACCCACCCCAACACCGCGAATACTGACATCGGAAACCCCGACGA
ATGCACTCGGGAGCAGGTACGGAAACAAGCACCAAAGAACCTCAAGATCC
GCATCACAGCGCCGCCGGAACGCAAGTTCTCGACTTGGGTTGGCGGGTCC
ATCTTGGCGTCATTGGCTACCTTCAAGGTGCGCTGTTCCTTTTGGTTATG
GTGGTGAGGGTTCTGCGTTTTGCTTGTTGTTGTGACGATGGATGTGCCTG
TGTTGGTGGTTGTGGTTGTCGTGTCTGTTTGTGGGTGTTCTCCCGGTTGC
TGTTTGTGGGTGAGCTCCCGGTTGTGGTGGTTGGTCCGGCGGCTGGTCTT
TTCTTTCGTCGAGCTCATTTCGGAACCAACTCGATCGCCTGGTCCCGGAC
TGCTGGGTTTGATGCTGTTGAGACCACAGCCTACGGGTGGCTACACGTCC
CTCTGCTTGTCGAGCCCTTGGCAACTGCCTGCTTCCCAGGTTCCATTAAC
CAAGAACACGCTTGTTTGTCTGAGAACCTCCGACGGCATGCGTGGCGCTG
ATCGGTTTCATCGGTACCTCTCATGATACTTGGGTGCGATATCCCTTTCC
TCCCGAGCATGGTGACCTGTCCGCAAGCCGACACAGCTTAAGGTCACCGC
TCCCCATCATAGGAACTCCGAAACTCTGTAAGCTTTTTCCATCATTTTGG
ACGTCGAGGCCCCAATTCCTTGGGCTGGCTGGACTGTCGCCCCACACACC
CCCCCCCCCTAAACATCGCCGTTTCTTTCGCTCATCGTGCGTTGCGTCGC
CCGCAGGACATGTGGGTTACTCGCGCCGAGTTCAGAGAACACGGGCCAAG
CATCATGGACAGCAAATCTCTTTGA

Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10190:157..3181+

>mRNA_H-canaliculatus_F_contig10190.212.1 ID=mRNA_H-canaliculatus_F_contig10190.212.1|Name=mRNA_H-canaliculatus_F_contig10190.212.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=1140bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10190:157..3181+ (Hapterophycus canaliculatus Oshoro5f female)
AGGGATGTAACGGAGCGGCTACAACTTCTTCTCCGTAGAGCGGGGCACAA
TCTCCACACTTCCGCAGAATTGGAGAGGGATGTAACGGAGCGGCTACAAC
TTCTTCTCCGTAGAGCGGGGCACAATCTCCACACTTCCGCAGAATTGGAG
GTGGTGCGCCAGATGAAGGAGGAGCTCTGCTACGTGGCGTTTAACCCCTC
CAGCGAGGAGCAAGTCAAGCAGCCCGACACGGTTTACAAGCTTCCCGACG
GCCAAACAATCAGAGTGGTGCGCCAGATGAAGGAGGAGCTCTGCTACGTG
GCGTTTAACCCCTCCAGCGAGGAGCAAGTCAAGCAGCCCGACACGGTTTA
CAAGCTTCCCGACGGCCAAACAATCAGAGTGGGTCCCGAGCGATACCGCG
CGCCCGAGTGCCTGTTCCACCCGGAGCAGATGGGCTCGGAGTGCATGGGG
GTGCACGACTGCCTCCTCAAGGGCATCATGCGGACCGACATGGACATGCG
GCGAACGCTGTTCGGGCAGGTGGTTCTTTCTGGCGGCAGCACCCTCTTCC
CCGGGTTCGGCGACCGCCTGCTCAACGAGGTGGGTCCCGAGCGATACCGC
GCGCCCGAGTGCCTGTTCCACCCGGAGCAGATGGGCTCGGAGTGCATGGG
GGTGCACGACTGCCTCCTCAAGGGCATCATGCGGACCGACATGGACATGC
GGCGAACGCTGTTCGGGCAGGTGGTTCTTTCTGGCGGCAGCACCCTCTTC
CCCGGGTTCGGCGACCGCCTGCTCAACGAGGTACGGAAACAAGCACCAAA
GAACCTCAAGATCCGCATCACAGCGCCGCCGGAACGCAAGTTCTCGACTT
GGGTTGGCGGGTCCATCTTGGCGTCATTGGCTACCTTCAAGGTACGGAAA
CAAGCACCAAAGAACCTCAAGATCCGCATCACAGCGCCGCCGGAACGCAA
GTTCTCGACTTGGGTTGGCGGGTCCATCTTGGCGTCATTGGCTACCTTCA
AGGACATGTGGGTTACTCGCGCCGAGTTCAGAGAACACGGGCCAAGCATC
ATGGACAGCAAATCTCTTTGAGACATGTGGGTTACTCGCGCCGAGTTCAG
AGAACACGGGCCAAGCATCATGGACAGCAAATCTCTTTGA