mRNA_H-canaliculatus_F_contig10167.193.1 (mRNA) Hapterophycus canaliculatus Oshoro5f female
You are viewing an mRNA, more information available on the corresponding polypeptide page
|
Overview
Homology
BLAST of mRNA_H-canaliculatus_F_contig10167.193.1 vs. uniprot
Match: A0A6H5JUZ4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUZ4_9PHAE) HSP 1 Score: 76.6 bits (187), Expect = 2.020e-14 Identity = 37/65 (56.92%), Postives = 42/65 (64.62%), Query Frame = 2 Query: 65 GAHFWYKARDAHWWLAKISKSIGASSNPVRYIVRFLDDPGPIELPLPSDMYSHSMTAACGSWCLQ 259
GA FWYK RD WWL KI+ G Y+VRFLDDPGP++L LP YS + TA GSWCLQ
Sbjct: 1302 GAFFWYKTRDGLWWLGKIT---GPPLQSDLYVVRFLDDPGPVKLALPDVRYSTAETAVSGSWCLQ 1363 The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig10167.193.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90) Total hits: 1 ZOOMx 1POSITION0
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig10167.193.1 >prot_H-canaliculatus_F_contig10167.193.1 ID=prot_H-canaliculatus_F_contig10167.193.1|Name=mRNA_H-canaliculatus_F_contig10167.193.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=87bp GFSIVPRGLWLTPFQVSVLPAGRTLLVQGPRRPLVVGEDLQIHRCQLQPCback to top mRNA from alignment at H-canaliculatus_F_contig10167:91..551+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-canaliculatus_F_contig10167.193.1 ID=mRNA_H-canaliculatus_F_contig10167.193.1|Name=mRNA_H-canaliculatus_F_contig10167.193.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=461bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10167:91..551+ (Hapterophycus canaliculatus Oshoro5f female)back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig10167:91..551+ >mRNA_H-canaliculatus_F_contig10167.193.1 ID=mRNA_H-canaliculatus_F_contig10167.193.1|Name=mRNA_H-canaliculatus_F_contig10167.193.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=522bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10167:91..551+ (Hapterophycus canaliculatus Oshoro5f female)back to top |