Homology
BLAST of mRNA_H-canaliculatus_F_contig10147.165.1 vs. uniprot
Match:
A0A6H5K975_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K975_9PHAE)
HSP 1 Score: 81.3 bits (199), Expect = 1.280e-15
Identity = 50/138 (36.23%), Postives = 78/138 (56.52%), Query Frame = 1
Query: 1 SGVLPLLFAPVFTDVNSMEHYVRFSEIDAVADRTESAYNTISEKREVCHAFRNLIQSCSASTYMVGAPSYTASELGALEKTEREQVAK-------------------------GAVGNANAGESKHREVKQSAPSASG 339
S ++P L AP+F+ +++ YVR + VADR T + K VC+AF++L+++CS S ++V +PS+TA L L+K+++EQV + G V N N GE+K++E+K SAPSASG
Sbjct: 121 SSIVPFLLAPIFSSPDNLGRYVRTMVVTEVADRISVEPGTPAGKAAVCNAFQDLVKACSWSCFVVRSPSFTAEGLHVLQKSQQEQVKQATRVIGVALGTIHKGLHITRNVVVNGVVTNCNVGEAKNKELKASAPSASG 258
BLAST of mRNA_H-canaliculatus_F_contig10147.165.1 vs. uniprot
Match:
D7FWW9_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FWW9_ECTSI)
HSP 1 Score: 79.0 bits (193), Expect = 8.250e-15
Identity = 51/138 (36.96%), Postives = 76/138 (55.07%), Query Frame = 1
Query: 1 SGVLPLLFAPVFTDVNSMEHYVRFSEIDAVADRTESAYNTISEKREVCHAFRNLIQSCSASTYMVGAPSYTASELGALEKTEREQVAK-------------------------GAVGNANAGESKHREVKQSAPSASG 339
S P L AP+F+ +++ YVR + VADR T + K VC+AF++L+++CS S ++V +PS+TA L AL+K++ EQV + G V N N GE+K++E+K SAPSASG
Sbjct: 200 SSSFPFLLAPIFSSPDNLGRYVRTMVVTEVADRISVDPGTPAGKAAVCNAFQDLVKACSWSCFVVRSPSFTAEGLRALQKSQLEQVKQATRVMGVALGTIHKGLHIARNVVVNGVVTNCNVGEAKNKELKASAPSASG 337
BLAST of mRNA_H-canaliculatus_F_contig10147.165.1 vs. uniprot
Match:
A0A6H5JWC7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JWC7_9PHAE)
HSP 1 Score: 73.9 bits (180), Expect = 4.740e-13
Identity = 48/137 (35.04%), Postives = 74/137 (54.01%), Query Frame = 1
Query: 4 GVLPLLFAPVFTDVNSMEHYVRFSEIDAVADRTESAYNTISEKREVCHAFRNLIQSCSASTYMVGAPSYTASELGALEKTEREQVAK-------------------------GAVGNANAGESKHREVKQSAPSASG 339
+ P L AP+F+ +++ YVR VADR T + K VC+AF++L+++CS S ++V +PS+TA L L+ +++EQV + G V N N GE+K++E+K SAPSASG
Sbjct: 51 SIFPFLLAPIFSSPDNLGRYVRAMVAMEVADRISVEPVTPAGKAAVCNAFQDLVKACSWSCFVVRSPSFTAEGLHVLQNSQQEQVKQATRVIRVALGTIHKGLDIARNLVVNGVVTNCNVGEAKNKELKASAPSASG 187
BLAST of mRNA_H-canaliculatus_F_contig10147.165.1 vs. uniprot
Match:
A0A6H5KR91_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KR91_9PHAE)
HSP 1 Score: 64.3 bits (155), Expect = 9.280e-10
Identity = 44/136 (32.35%), Postives = 70/136 (51.47%), Query Frame = 1
Query: 7 VLPLLFAPVFTDVNSMEHYVRFSEIDAVADRTESAYNTISEKREVCHAFRNLIQSCSASTYMVGAPSYTASELGALEKTEREQVAK-------------------------GAVGNANAGESKHREVKQSAPSASG 339
+ P L AP+F+ +++ YVR + VADR +T + K VC+ F+ L+++CS S + V + S TA L+++++EQV + G V N N E+K++E+K SAPSASG
Sbjct: 54 IFPFLLAPIFSSPDNLGRYVRTMVVTEVADRISVEPDTPAGKEAVCNTFQYLVKACSWSCFEVRSQSLTAEGFHVLQQSQQEQVKQATRVIGVALGTIHKGLHIARNVVVNGDVTNCNVEEAKNKELKASAPSASG 189
BLAST of mRNA_H-canaliculatus_F_contig10147.165.1 vs. uniprot
Match:
A0A6H5JTN6_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JTN6_9PHAE)
HSP 1 Score: 50.8 bits (120), Expect = 5.660e-5
Identity = 25/40 (62.50%), Postives = 32/40 (80.00%), Query Frame = 1
Query: 139 VCHAFRNLIQSCSASTYMVGAPSYTASELGALEKTEREQV 258
VC AFR+L+++CSAST+MV SYT +EL LEK +REQV
Sbjct: 349 VCRAFRDLMEACSASTFMVRLGSYTDAELRVLEKWQREQV 388
The following BLAST results are available for this feature:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig10147.165.1
>prot_H-canaliculatus_F_contig10147.165.1 ID=prot_H-canaliculatus_F_contig10147.165.1|Name=mRNA_H-canaliculatus_F_contig10147.165.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=113bp
SGVLPLLFAPVFTDVNSMEHYVRFSEIDAVADRTESAYNTISEKREVCHA
FRNLIQSCSASTYMVGAPSYTASELGALEKTEREQVAKGAVGNANAGESK
HREVKQSAPSASG
back to topmRNA from alignment at H-canaliculatus_F_contig10147:344..2271+
Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig10147.165.1 ID=mRNA_H-canaliculatus_F_contig10147.165.1|Name=mRNA_H-canaliculatus_F_contig10147.165.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=1928bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10147:344..2271+ (Hapterophycus canaliculatus Oshoro5f female)
TCAGGCGTGCTCCCGCTGCTGTTCGCTCCAGTCTTCACGGACGTCAATTC
AATGGTAACTGTCTGCTTTCGCACAACTGGTGCCGGCAAGCACTATTTGG
ATTTTGCTAACCGCCCGTGACTGCATCATGCGAGGATGGCTGGGGATGAA
GACACCAAACAAATTGGCCGGCAATCGCGGGCCATGTGCAAGGTTTTCCG
TTCCAAAGTATTTTTCAGAGTTATGTCCTCAGGGGCGTGGAGGGGGGGGG
AGATCATGCTCATCCTCTTGTCTCTGATCTGGTTGCCAATCCGCGTTTTG
TGCCTACCGATTTCAGGCTCAACATGAGTTCTTCGCCTCCGCAGATGTTA
TAATCCCACACGCCATCCAGCACCCAGTTACTGAAATAATATCCACACCA
TCGCCTTCTCCTGTGGAGCCGAACGTGGTTTTTCAACAGACTCTTTGTCG
TACACCGTACCTTTTCCTCAGGAACATTACGTCCGATTCTCGGAGATTGA
TGCTGTCGCAGATAGGACGGAGTCGGCGTATAACACCATCTCGGAGAAGA
GGGAGGTGTGCCATGCATTCCGGAACCTCATCCAATCATGCAGTGCCAGC
ACCTACATGGTAGGGGCTCCCTCGTACACTGCATCAGAGCTAGGCGCGCT
TGAGAAGACCGAGAGAGAACAGGTGGGGCGATTCTCGTGGTTATTTTCTG
ATTTTTATCGAGGACGTGCTGCGGCGACATTTGAATGGTTTTGGGAGAAA
TCGAGTGATGATGGGGGGGGGGGCAAGGTGTGTCAGAGCGGAATAAACGC
TCTTGTCTTTACCCCAGTAAACCTTACTCTAAGGCCAGCTCACCGCGCTG
AACACATTGTGTCAACGCTGTCTCTGAGCGTGGTCCAACCCGGACATTCT
GATCTGTTTCGGGCATGAGGGTGGAGCGTTACGTACCACCTTCCCCAGAC
AGCTTTCCCTTCCAAACTCCGGTCAAAACCGCCTGATAGTGGAGAAGGGA
CAGAGAACCTCGAATCGTCATCTTGTGGGTCTCTAGTGACCAGGTCTCGC
ACAACTGGAGGCTCAGTAGCCGTTCACACCCCCAACGTCACCTGCGGCGG
CTTCGCCCCCCTACGTTTTTTACTGGCTCCGTTTTTTGCCTCAACTTCCT
ACACCACGATTCACATCTTTCACATCGTCGACCACTGTACTACATATTGG
GAGGAACCCTACGCTTGGACTCTCAGTCCGTTTTCAATGTGCAGGGGCGT
CGTTCGGAGAATGCGGCTCAAAAGTAGGTTGGCGATTCAGATGGACGCCT
TTGCTTTTCTCCAGCGGTCGGTGTGCCCCATTTTCTGCGCGCTTCGTCAC
CCGCATGCAGGTCAAGCAGACCTCTCTCGTAATGGGACAAGAGCTGGGCT
CTTTCCACAAAGGGCTGCATGCTGCCGACGATGTCCGAAACCTATGCGAG
CCCCTCTGCGGTACTCGCACGCCATCTGGAAAGTAGCTCGCTCACAACCG
AGATGCTGCTAGGGGTGCTGGTTTCCGCCATGTTTCCGGCGATCACGTCA
TCGACCATCGGTAGAGCGCGAGCTGTCCCGCCTTGCGAACCTGCTACGAG
GGTCACCGGTGCTGCTGTGAGGCGCGCTTTTCGCGCTTGGCTGATCGGCG
ATACCCGCTTATCAACCTGGCAACACGCCACTGCACCAGACGACAGCAAT
CCGACAAGCTTCCTGCTTCTAAAATGCGATACAGACCATGCCGTTCGTCC
TGAAGTACAGCCTTTTTCACACCGTGCGAGGGTTGATTCTCCATACACTT
AGTTCACAGTCTAGTCCTCCCTCTGCCATCGTGTTGTTGTAGGTCGCGAA
AGGTGCGGTCGGCAACGCGAATGCCGGGGAATCCAAGCACAGGGAGGTAA
AACAATCTGCGCCATCTGCCAGCGGTCG
back to topCoding sequence (CDS) from alignment at H-canaliculatus_F_contig10147:344..2271+
>mRNA_H-canaliculatus_F_contig10147.165.1 ID=mRNA_H-canaliculatus_F_contig10147.165.1|Name=mRNA_H-canaliculatus_F_contig10147.165.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=678bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10147:344..2271+ (Hapterophycus canaliculatus Oshoro5f female)
TCAGGCGTGCTCCCGCTGCTGTTCGCTCCAGTCTTCACGGACGTCAATTC
AATGTCAGGCGTGCTCCCGCTGCTGTTCGCTCCAGTCTTCACGGACGTCA
ATTCAATGGAACATTACGTCCGATTCTCGGAGATTGATGCTGTCGCAGAT
AGGACGGAGTCGGCGTATAACACCATCTCGGAGAAGAGGGAGGTGTGCCA
TGCATTCCGGAACCTCATCCAATCATGCAGTGCCAGCACCTACATGGTAG
GGGCTCCCTCGTACACTGCATCAGAGCTAGGCGCGCTTGAGAAGACCGAG
AGAGAACAGGAACATTACGTCCGATTCTCGGAGATTGATGCTGTCGCAGA
TAGGACGGAGTCGGCGTATAACACCATCTCGGAGAAGAGGGAGGTGTGCC
ATGCATTCCGGAACCTCATCCAATCATGCAGTGCCAGCACCTACATGGTA
GGGGCTCCCTCGTACACTGCATCAGAGCTAGGCGCGCTTGAGAAGACCGA
GAGAGAACAGGTCGCGAAAGGTGCGGTCGGCAACGCGAATGCCGGGGAAT
CCAAGCACAGGGAGGTAAAACAATCTGCGCCATCTGCCAGCGGTGTCGCG
AAAGGTGCGGTCGGCAACGCGAATGCCGGGGAATCCAAGCACAGGGAGGT
AAAACAATCTGCGCCATCTGCCAGCGGT
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