Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | mitochondrion |
| Exons | 1 |
| Model size | 664 |
| Cds size | 477 |
| Stop | 1 |
| Start | 0 |
Relationships
The following CDS feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622928641.8329039-CDS-H-canaliculatus_F_contig10121:3406..3883 | 1622928641.8329039-CDS-H-canaliculatus_F_contig10121:3406..3883 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig10121 3407..3883 + |
| 1696845509.167367-CDS-H-canaliculatus_F_contig10121:3406..3883 | 1696845509.167367-CDS-H-canaliculatus_F_contig10121:3406..3883 | Hapterophycus canaliculatus Oshoro5f female | CDS | H-canaliculatus_F_contig10121 3407..3883 + |
The following UTR feature(s) are a part of this mRNA:
| Feature Name | Unique Name | Species | Type | Position |
|---|
| 1622928641.8460963-UTR-H-canaliculatus_F_contig10121:3883..4068 | 1622928641.8460963-UTR-H-canaliculatus_F_contig10121:3883..4068 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig10121 3884..4068 + |
| 1696845509.178012-UTR-H-canaliculatus_F_contig10121:3883..4068 | 1696845509.178012-UTR-H-canaliculatus_F_contig10121:3883..4068 | Hapterophycus canaliculatus Oshoro5f female | UTR | H-canaliculatus_F_contig10121 3884..4068 + |
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig10121.151.1 >prot_H-canaliculatus_F_contig10121.151.1 ID=prot_H-canaliculatus_F_contig10121.151.1|Name=mRNA_H-canaliculatus_F_contig10121.151.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=159bp
RCRRLSSTRSVFCSSRFSKKRYFVFQGAWCRDTALGPCAVGRRRKPCVRG
FVLVPPRGFGTTVFCCPFSCCRPPHRVTTYLCHAASAHPVLPLVCCKTRH
VDATDASIVGAGCTSWRRCGISNAPPPLISPACLCLLATLLPLVLLIPSC
VRLFSCLR* back to topmRNA from alignment at H-canaliculatus_F_contig10121:3407..4068+ Legend: CDSpolypeptideUTR Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-canaliculatus_F_contig10121.151.1 ID=mRNA_H-canaliculatus_F_contig10121.151.1|Name=mRNA_H-canaliculatus_F_contig10121.151.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=662bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10121:3407..4068+ (Hapterophycus canaliculatus Oshoro5f female)
CGTTGTCGTCGTCTTTCATCGACGCGATCAGTCTTCTGTTCATCCCGATT
CTCAAAAAAGAGATATTTTGTCTTTCAAGGGGCATGGTGTCGGGATACGG
CTCTAGGTCCGTGCGCAGTGGGCCGTCGGCGGAAGCCCTGCGTCCGAGGT
TTTGTCTTGGTGCCTCCTAGAGGTTTTGGTACTACGGTGTTTTGCTGCCC
TTTCTCTTGTTGTCGGCCCCCCCACCGCGTTACGACTTACCTTTGTCATG
CTGCGTCCGCCCACCCCGTCCTTCCTTTGGTGTGCTGCAAAACGAGGCAC
GTCGACGCTACTGACGCATCGATCGTTGGTGCAGGATGCACCTCGTGGAG
ACGTTGCGGCATCTCCAACGCCCCGCCACCGCTCATCTCTCCCGCATGCT
TGTGTTTATTGGCCACCCTGTTGCCTCTGGTACTCCTGATACCGTCCTGC
GTGCGATTATTCTCCTGCCTGCGATGACCATGCGTTGAGGGTTTCACGCC
TTTGTCCCTGAGGCGAAGGCTGTCTCGTGCCTCTACCGTCTGGGGGGTCT
CGCCTCCAAGCCTGCTCCAACACGCTTGAATTTGACAGCTCTACGGGATG
CACCCCTGCGCCAGAGCTTCAAGGCTCCAAAGCTTCACGTCCAACTATGC
CGTACCCCTCCG back to topCoding sequence (CDS) from alignment at H-canaliculatus_F_contig10121:3407..4068+ >mRNA_H-canaliculatus_F_contig10121.151.1 ID=mRNA_H-canaliculatus_F_contig10121.151.1|Name=mRNA_H-canaliculatus_F_contig10121.151.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=954bp|location=Sequence derived from alignment at H-canaliculatus_F_contig10121:3407..4068+ (Hapterophycus canaliculatus Oshoro5f female)
CGTTGTCGTCGTCTTTCATCGACGCGATCAGTCTTCTGTTCATCCCGATT
CTCAAAAAAGAGATATTTTGTCTTTCAAGGGGCATGGTGTCGGGATACGG
CTCTAGGTCCGTGCGCAGTGGGCCGTCGGCGGAAGCCCTGCGTCCGAGGT
TTTGTCTTGGTGCCTCCTAGAGGTTTTGGTACTACGGTGTTTTGCTGCCC
TTTCTCTTGTTGTCGGCCCCCCCACCGCGTTACGACTTACCTTTGTCATG
CTGCGTCCGCCCACCCCGTCCTTCCTTTGGTGTGCTGCAAAACGAGGCAC
GTCGACGCTACTGACGCATCGATCGTTGGTGCAGGATGCACCTCGTGGAG
ACGTTGCGGCATCTCCAACGCCCCGCCACCGCTCATCTCTCCCGCATGCT
TGTGTTTATTGGCCACCCTGTTGCCTCTGGTACTCCTGATACCGTCCTGC
GTGCGATTATTCTCCTGCCTGCGATGACGTTGTCGTCGTCTTTCATCGAC
GCGATCAGTCTTCTGTTCATCCCGATTCTCAAAAAAGAGATATTTTGTCT
TTCAAGGGGCATGGTGTCGGGATACGGCTCTAGGTCCGTGCGCAGTGGGC
CGTCGGCGGAAGCCCTGCGTCCGAGGTTTTGTCTTGGTGCCTCCTAGAGG
TTTTGGTACTACGGTGTTTTGCTGCCCTTTCTCTTGTTGTCGGCCCCCCC
ACCGCGTTACGACTTACCTTTGTCATGCTGCGTCCGCCCACCCCGTCCTT
CCTTTGGTGTGCTGCAAAACGAGGCACGTCGACGCTACTGACGCATCGAT
CGTTGGTGCAGGATGCACCTCGTGGAGACGTTGCGGCATCTCCAACGCCC
CGCCACCGCTCATCTCTCCCGCATGCTTGTGTTTATTGGCCACCCTGTTG
CCTCTGGTACTCCTGATACCGTCCTGCGTGCGATTATTCTCCTGCCTGCG
ATGA back to top
|