Homology
BLAST of mRNA_H-canaliculatus_F_contig1004.74.1 vs. uniprot
Match:
A0A6H5JUU1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JUU1_9PHAE)
HSP 1 Score: 170 bits (430), Expect = 1.640e-45
Identity = 81/116 (69.83%), Postives = 94/116 (81.03%), Query Frame = 2
Query: 266 QGFSERQNIMAAYV*DQFAKVYFTPQNLGGGCNLACPAAHLALTRLIDKHDDSSRLTGRPIIQHAHWQVDICVSKNKNNLFVGYAGSLVVANAIGVVEINFMQVGHTHTKIDQVFS 613
+G+SERQ IMA ++ QF +VYFTPQ LGGGCNLAC AAHLA+TR+IDK+ DS IIQHAHWQVD CVS+NKNN F+GYAG LV A+ + VVEI+FM VGHTHTKIDQVFS
Sbjct: 156 RGYSERQKIMAVHIEGQFVEVYFTPQYLGGGCNLACTAAHLAITRIIDKYHDSPPHPSGCIIQHAHWQVDNCVSENKNNFFLGYAGLLVAADVVRVVEIHFMMVGHTHTKIDQVFS 271
BLAST of mRNA_H-canaliculatus_F_contig1004.74.1 vs. uniprot
Match:
A0A6H5KA02_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KA02_9PHAE)
HSP 1 Score: 103 bits (258), Expect = 2.740e-22
Identity = 56/115 (48.70%), Postives = 67/115 (58.26%), Query Frame = 2
Query: 269 GFSERQNIMAAYV*DQFAKVYFTPQNLGGGCNLACPAAHLALTRLIDKHDDSSRLTGRPIIQHAHWQVDICVSKNKNNLFVGYAGSLVVANAIGVVEINFMQVGHTHTKIDQVFS 613
GFSERQ +MA F V+F PQ GGG NL C A LAL RL + R I+ H Q+D CV +NKNN+ + + G LV A IG E+ F+ VGHTH KIDQVFS
Sbjct: 93 GFSERQKVMAVQAEGAFVDVHFVPQTTGGGSNLVCTALWLALKRLSAMGTKPGQ---RFYIKRLHLQLDNCVGENKNNIVLAFIGGLVAAGVIGSAEVCFLIVGHTHIKIDQVFS 204
BLAST of mRNA_H-canaliculatus_F_contig1004.74.1 vs. uniprot
Match:
A0A6H5JCW3_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JCW3_9PHAE)
HSP 1 Score: 97.1 bits (240), Expect = 7.260e-20
Identity = 45/67 (67.16%), Postives = 51/67 (76.12%), Query Frame = 2
Query: 413 HDDSSRLTGRPIIQHAHWQVDICVSKNKNNLFVGYAGSLVVANAIGVVEINFMQVGHTHTKIDQVFS 613
HD SR +IQHAHWQVD C S+NKNN F+G+AG LV A+ I VVEINFM VGHTH KIDQ+FS
Sbjct: 2 HDKGSRHPSGYLIQHAHWQVDNCASENKNNFFLGFAGLLVAASVIRVVEINFMMVGHTHMKIDQIFS 68
BLAST of mRNA_H-canaliculatus_F_contig1004.74.1 vs. uniprot
Match:
A0A6H5KUA0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUA0_9PHAE)
HSP 1 Score: 74.3 bits (181), Expect = 2.530e-14
Identity = 36/58 (62.07%), Postives = 41/58 (70.69%), Query Frame = 2
Query: 440 RPIIQHAHWQVDICVSKNKNNLFVGYAGSLVVANAIGVVEINFMQVGHTHTKIDQVFS 613
RP I QVD CVS+NKN++ +GY GSLV IG VE+ FM VGHTH KIDQVFS
Sbjct: 8 RPYIYRFTIQVDNCVSENKNHIVIGYLGSLVAQGIIGEVEVQFMPVGHTHIKIDQVFS 65
BLAST of mRNA_H-canaliculatus_F_contig1004.74.1 vs. uniprot
Match:
A0A6H5KN27_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KN27_9PHAE)
HSP 1 Score: 74.3 bits (181), Expect = 1.290e-12
Identity = 41/86 (47.67%), Postives = 50/86 (58.14%), Query Frame = 2
Query: 356 GCNLACPAAHLALTRLIDKHDDSSRLTGRPIIQHAHWQVDICVSKNKNNLFVGYAGSLVVANAIGVVEINFMQVGHTHTKIDQVFS 613
G NL C A LAL RL + R I+ H Q+D CV +NKNN+ + + G LV A IG E+ F+ VGHTH KIDQVFS
Sbjct: 10 GSNLVCTALWLALKRLSAMWTKPGQ---RFYIKRLHLQLDNCVGENKNNIVLAFIGGLVAAGVIGSAEVCFLIVGHTHIKIDQVFS 92
BLAST of mRNA_H-canaliculatus_F_contig1004.74.1 vs. uniprot
Match:
A0A6H5KAY2_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAY2_9PHAE)
HSP 1 Score: 74.3 bits (181), Expect = 4.870e-12
Identity = 41/86 (47.67%), Postives = 50/86 (58.14%), Query Frame = 2
Query: 356 GCNLACPAAHLALTRLIDKHDDSSRLTGRPIIQHAHWQVDICVSKNKNNLFVGYAGSLVVANAIGVVEINFMQVGHTHTKIDQVFS 613
G NL C A LAL RL + R I+ H Q+D CV +NKNN+ + + G LV A IG E+ F+ VGHTH KIDQVFS
Sbjct: 10 GSNLVCTALWLALKRLSAMWTKPGQ---RFYIKRLHLQLDNCVGENKNNIVLAFIGGLVAAGVIGSAEVCFLIVGHTHIKIDQVFS 92
BLAST of mRNA_H-canaliculatus_F_contig1004.74.1 vs. uniprot
Match:
A0A6H5JAR9_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAR9_9PHAE)
HSP 1 Score: 70.5 bits (171), Expect = 1.030e-10
Identity = 40/90 (44.44%), Postives = 51/90 (56.67%), Query Frame = 2
Query: 356 GCNLACPAAHLALTRLIDKHDDSSRLTGRP----IIQHAHWQVDICVSKNKNNLFVGYAGSLVVANAIGVVEINFMQVGHTHTKIDQVFS 613
G NL C LAL RL S + +P I+ H Q+D CV +NKNN+ + + G LV A IG E+ F+ +GHTH KIDQVFS
Sbjct: 10 GSNLECTTLWLALKRL-------SAMWTKPGERFHIKRRHLQLDNCVGENKNNIVMAFIGGLVAAGVIGFAEVCFLILGHTHIKIDQVFS 92
BLAST of mRNA_H-canaliculatus_F_contig1004.74.1 vs. uniprot
Match:
A0A6H5JXN7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXN7_9PHAE)
HSP 1 Score: 60.5 bits (145), Expect = 2.950e-7
Identity = 28/56 (50.00%), Postives = 36/56 (64.29%), Query Frame = 2
Query: 446 IIQHAHWQVDICVSKNKNNLFVGYAGSLVVANAIGVVEINFMQVGHTHTKIDQVFS 613
++ A D CV +NKNN+ + + G LV A IG E+ F+ VGHTH KIDQVFS
Sbjct: 204 VLHQASPPSDNCVGENKNNIVLAFIGGLVAAGVIGSAEVCFLIVGHTHIKIDQVFS 259
The following BLAST results are available for this feature:
BLAST of mRNA_H-canaliculatus_F_contig1004.74.1 vs. uniprot
Analysis Date: 2022-09-19 (
Diamond blastx: OGS1.0 of Hapterophycus canaliculatus Oshoro5f female vs UniRef90 )
Total hits: 8
0 1 Expect = 1.64e-45 / Id = 69.83 Expect = 2.74e-22 / Id = 48.70 Expect = 7.26e-20 / Id = 67.16 Expect = 2.53e-14 / Id = 62.07 Expect = 1.29e-12 / Id = 47.67 Expect = 4.87e-12 / Id = 47.67 Expect = 1.03e-10 / Id = 44.44 Expect = 2.95e-7 / Id = 50.00 Sequence A0A6H5JUU1_9PHAE A0A6H5KA02_9PHAE A0A6H5JCW3_9PHAE A0A6H5KUA0_9PHAE A0A6H5KN27_9PHAE A0A6H5KAY2_9PHAE A0A6H5JAR9_9PHAE A0A6H5JXN7_9PHAE back to top
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-canaliculatus_F_contig1004.74.1
>prot_H-canaliculatus_F_contig1004.74.1 ID=prot_H-canaliculatus_F_contig1004.74.1|Name=mRNA_H-canaliculatus_F_contig1004.74.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=polypeptide|length=165bp
LVTPEEHGRNSLPFCGADLHEQGGIKHLGVCSWNVPNLIASFRSYTYTVL back to top mRNA from alignment at H-canaliculatus_F_contig1004:28969..31220+
Legend: polypeptide CDS UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-canaliculatus_F_contig1004.74.1 ID=mRNA_H-canaliculatus_F_contig1004.74.1|Name=mRNA_H-canaliculatus_F_contig1004.74.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=mRNA|length=2252bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1004:28969..31220+ (Hapterophycus canaliculatus Oshoro5f female)TTGGTAACACCAGAAGAGCATGGGCGTAACTCTCTTCCTTTCTGTGGTGC
TGATCTTCATGAACAAGGCGGAATCAAGCACCTAGGTGTGTGTTCATGGA
ACGTGCCCAACTTGATTGCCTCATTCAGGAGCTATACCTACACAGTCCTA
CACAGTACGAGGACTTCATCAAGGAGGCTGTTCCGAGTCTACCCTAGCGA
ACCCTCGAAGCGGGTAAGCAAGACCCTTTTTCTCCAGAATGCTGAGAGAG
CAGAGGCCTCGCATCCAG GTGAAAGTTGGAGGAGATTTCATGAAATGCGA
CACATGCGTCGCGTTGAAGCGGTACGGTGCACCTGGTGTCAAACCAACAC
TGGACTTCACGGCCCGCCAGGCCATCGAGAAGGAGCTGTCTGCCCACCGG
AAGGTACTGTAGGCCACGTGCTTCAATACTACTCACGTAGTTACGAGACG
TGGAGCGCAGCCTTCCCCCCCACCCGGCGCGAACCTTTGTAGGTGTTGTG
GTTAAGGGCTTATGACGAGCCGCCATTCGTGACTCGAGTACCTTGTTTGA
AGCTGTTTTTCGGTAGCGCGCAAGATTGGGGCTGTGGGATGAATCGGCTG
TGAGAGGGTTGCTGTGCGATACCCAAAAGCCTTCTTTTTCCTCCAGGGCA
GCATCGCCTAGCGGGCACAAAGGAGAACAGGAAGAAGAGGGTAATGTTTT
CCAATATACATCATAACATCATGTCTAATGTAGGTGTGTGTCATGTTCAG
TCACGTACCTGACAAGTACAGCAATTTTCGTCATCTTTATGAAGGTCTTC
ATTTTTCATGCTCGCCTGGCTTCCTGTGGCGCTCGCACGCTAGATGGTCA
CATTGGGTCGGCTGGTCGTCGCCAACAGCACGAACAATGCCATGCGGGCC
AAGGCCGACGGCAACTAGCTCGACTTTGTGTTCATGTCTGTAGACGCGGC
GAACCAAAGGTCGCACGCCCTCCCAGCCCTCTACCCACCGACTCACGGCT
GTGGCAGGTGAGCACAGGCATGCACAATCTCTCTGTCCCTACCTTCTTCT
CGGACGCGCGCCAAAAACAATCATGGAGTACCCCGTCTCATTCATAGTTA
GGATGCCGAGTCGGAGTAAGAAGCCGCATAGACGCACACAGTCTCGACAC
GTGGCCCGTTCCGTTCACCCTGATGAGGAGCCTACTCCTGAGTCCTCACT
TCACCTCTTTTTTCTCTCGTGCTTTTGTGTTCCAAGGGCTTCTCCGAACG
CCAGAACATCATGGCCGCATACGTCTAAGACCAGTTCGCGAAAGTGTACT
TCACTCCACAGAATCTAGGAGGAG GTATGTGTGTTTGGGGGGGCATTGAT
GCATCAGTCGCAGCACCGGAATACACGCTGTCGAAATGGCGAGTTCGGCC
GCAGTTTAGACGCGGAACTACAGTTGTATACCCGTGCATGATTTGAGTCC
ATACCACACGCAAACGCGATAGATGAGATGGAAGAGTAAACAAGCGTGCA
AAATACGATCCCTCGGCTCAGATTCAATGCAACATGGGGTGTAAACCAAA
CCAAAGATTCTGATAGATATTCGAAGAGGTCTCGTAGGCAAGATTATCAG
CTCCCCCGGTGGGCGCGTGTGCAGCAACGAAAGTGAGGAGAACAACACAT
ATTCATCCCTAGGTAGACGACGCGAACGTAATCACAGCTGCGAGTGGCAT
CCGTCGACTGACGACACAATGTGTCTTTATCCGGGTACAGGTTGCAACCT
TGCCTGCCCAGCGGCCCACCTTGCCCTCACGCGGCTCATCGACAAGCACG
ACGACAGTTCCCGTCTTACCGGGCGTCCGATAATCCAGCACGCGCATTGG
CAG GTTAGAAAATTCATCTTATCGGGGAGCCTTATGGGTTGGTGAGTGCC
GACCAATAGGTACTAAGAGTCTTTGACGCTTCAGGTGTCCTTTGTTGGCT
GACTTCGGTATGTCTGGTGATGGACTCGAGGTATCGGTCTATGACTATAT
GAAACGGATCCTCCTCTCCACGAAACGTCGTGACTGAAGTGAACGGCAAT
TAGTCCTGAACGTTGCTGTACTTCCTTTCTCTTCACTGCCCCCCGAAACA
CCCCAGGTAGACATCTGCGTGTCCAAGAATAA GAACAACTTATTCGTCGG
ATACGCGGGCTCTTTGGTAGTGGCGAATGCCATCGGCGTGGTGGAGATAA
ACTTCATGCAAGTGGGTCACACCCACACGAAAATCGACCAAGTATTTTCG
AG back to top Coding sequence (CDS) from alignment at H-canaliculatus_F_contig1004:28969..31220+
>mRNA_H-canaliculatus_F_contig1004.74.1 ID=mRNA_H-canaliculatus_F_contig1004.74.1|Name=mRNA_H-canaliculatus_F_contig1004.74.1|organism=Hapterophycus canaliculatus Oshoro5f female|type=CDS|length=990bp|location=Sequence derived from alignment at H-canaliculatus_F_contig1004:28969..31220+ (Hapterophycus canaliculatus Oshoro5f female) back to top