prot_H-paniculata_contig19600.4978.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig19600.4978.1
Unique Nameprot_H-paniculata_contig19600.4978.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length48
Homology
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BLAST of mRNA_H-paniculata_contig19600.4978.1 vs. uniprot
Match: D8LS28_ECTSI (PX domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LS28_ECTSI)

HSP 1 Score: 60.5 bits (145), Expect = 2.000e-9
Identity = 27/42 (64.29%), Postives = 37/42 (88.10%), Query Frame = 0 
Query:    1 MSVEMGLVLQGETEAELPESVLGALRLEELDLQDTSRHKPLW 42
            +S+E+GL+L GE E+ELPESVLG LR+++LD QDT+RH+ LW
Sbjct:  862 LSLEVGLILHGELESELPESVLGVLRIDKLDPQDTTRHRLLW 903
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig19600.4978.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LS28_ECTSI2.000e-964.29PX domain-containing protein n=2 Tax=Ectocarpus Ta... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR009769Protein ENHANCED DISEASE RESISTANCE 2, C-terminalPFAMPF07059DUF1336coord: 1..31
e-value: 2.8E-8
score: 34.1

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig19600contigH-paniculata_contig19600:3639..3782 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig19600.4978.1mRNA_H-paniculata_contig19600.4978.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig19600 3639..3806 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig19600.4978.1 ID=prot_H-paniculata_contig19600.4978.1|Name=mRNA_H-paniculata_contig19600.4978.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=48bp
MSVEMGLVLQGETEAELPESVLGALRLEELDLQDTSRHKPLWDTPSP*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR009769EDR2_C