prot_H-paniculata_contig196.4975.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig196.4975.1
Unique Nameprot_H-paniculata_contig196.4975.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length211
Homology
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BLAST of mRNA_H-paniculata_contig196.4975.1 vs. uniprot
Match: D7FSK6_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK6_ECTSI)

HSP 1 Score: 99.0 bits (245), Expect = 1.030e-20
Identity = 81/222 (36.49%), Postives = 111/222 (50.00%), Query Frame = 0 
Query:    1 VLASSTVSLERWTAGTCIPALRPPSNVNAFRDRLTDQLAGFLCAGFRSRTSRFVKKRLALQSRSRPESISDGEQRGKFTIAAFGAFDEIEDEKAQGRAGRVCAGVKKPEDEKDSDDEELKDPRSFIRQPPPPQCFLETPADIMEAK-KRALRLEMLMKMIDEYHAKHGRHA-------------DITYPASGNAG------ATPCNDEDTA--HQCERTGEG 200
            +LA STVSLE WTA T I  L PP++  AF+  L +QLA  L AGFRSRTSR  +KR A +++ +   +     R + T+      ++       GR G++       ED+  S++ +    R     PPP    L +P D    + KRALRLEML +M+D++HAKHGR                +  PA G+A       AT C+DE     H  ER  EG
Sbjct:   39 LLAKSTVSLEDWTATTGIATLSPPTDNRAFKKILEEQLAALLGAGFRSRTSRLERKRAAREAQQQGGGV-----RWRGTLLELSEMEK-------GRLGQL------EEDDNGSENNDANPDR-----PPPKLPLLLSPRDSTPLEQKRALRLEMLTRMVDDFHAKHGRSRRXXXXXXXXXEKRGVGAPAPGDARDPTTVVATGCDDESAVGGHDGERVREG 237
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig196.4975.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FSK6_ECTSI1.030e-2036.49Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig196contigH-paniculata_contig196:38036..39897 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig196.4975.1mRNA_H-paniculata_contig196.4975.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig196 38036..39898 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig196.4975.1 ID=prot_H-paniculata_contig196.4975.1|Name=mRNA_H-paniculata_contig196.4975.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=211bp
VLASSTVSLERWTAGTCIPALRPPSNVNAFRDRLTDQLAGFLCAGFRSRT
SRFVKKRLALQSRSRPESISDGEQRGKFTIAAFGAFDEIEDEKAQGRAGR
VCAGVKKPEDEKDSDDEELKDPRSFIRQPPPPQCFLETPADIMEAKKRAL
RLEMLMKMIDEYHAKHGRHADITYPASGNAGATPCNDEDTAHQCERTGEG
LRGTGVGQVGG
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