prot_H-paniculata_contig196.4972.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig196.4972.1
Unique Nameprot_H-paniculata_contig196.4972.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length116
Homology
BLAST of mRNA_H-paniculata_contig196.4972.1 vs. uniprot
Match: D7FSK8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FSK8_ECTSI)

HSP 1 Score: 98.6 bits (244), Expect = 1.520e-24
Identity = 53/100 (53.00%), Postives = 67/100 (67.00%), Query Frame = 0
Query:   26 MSSALTSALRRAAVQPKAAPFRAVTQMRTMS-----------AQQSFQKNWLSDKGAWPVLGVISGAVVFSSFWGISTLMTNPDVRINRTMRTTVIRPGK 114
            MSS ++SA+RRA +QPK   FRA T   T             A +SF++ WLSDKGAWPV+GVI  A+ F ++W  STL+TNPDVRINRT+R T IRP +
Sbjct:    1 MSSVVSSAMRRAVMQPKPPMFRAATVNLTRGMASSEGTPKYGAAKSFKEAWLSDKGAWPVMGVIGFAITFVTYWSFSTLLTNPDVRINRTIRETTIRPPR 100          
BLAST of mRNA_H-paniculata_contig196.4972.1 vs. uniprot
Match: A0A6H5KK83_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KK83_9PHAE)

HSP 1 Score: 91.3 bits (225), Expect = 2.370e-21
Identity = 51/100 (51.00%), Postives = 64/100 (64.00%), Query Frame = 0
Query:   26 MSSALTSALRRAAVQPKAAPFRAVTQMRTMS-----------AQQSFQKNWLSDKGAWPVLGVISGAVVFSSFWGISTLMTNPDVRINRTMRTTVIRPGK 114
            MSS ++SA+RRA +QPK   FR  T   T             A +SF++ WLSD GAWPV+GVI  AV F ++W  STL T+PDVRINRT+R T IRP +
Sbjct:   27 MSSVVSSAMRRAVMQPKPPMFRTATVNLTRGMASGEGAPKYGAAKSFKEAWLSDIGAWPVIGVIGFAVTFVTYWSFSTLATHPDVRINRTIRETTIRPPR 126          
BLAST of mRNA_H-paniculata_contig196.4972.1 vs. uniprot
Match: A0A4D9DGT0_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9DGT0_9STRA)

HSP 1 Score: 57.8 bits (138), Expect = 1.060e-8
Identity = 32/74 (43.24%), Postives = 42/74 (56.76%), Query Frame = 0
Query:   46 FRAVTQMRTMSAQ--------QSFQKNWLSDKGAWPVLGVISGAVVFSSFWGISTLMTNPDVRINRTMRTTVIR 111
            F  V Q RT+S          +SF   WL DKGAWPV+G+I GA+VF   +  + +M +PDVRI  + R   IR
Sbjct:    9 FARVQQRRTLSTSVPSGVRYGKSFGATWLGDKGAWPVIGIIGGALVFCGSFISNKIMFHPDVRITPSKRNADIR 82          
BLAST of mRNA_H-paniculata_contig196.4972.1 vs. uniprot
Match: W7TS82_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TS82_9STRA)

HSP 1 Score: 58.2 bits (139), Expect = 4.750e-8
Identity = 31/74 (41.89%), Postives = 43/74 (58.11%), Query Frame = 0
Query:   46 FRAVTQMRTMSAQ--------QSFQKNWLSDKGAWPVLGVISGAVVFSSFWGISTLMTNPDVRINRTMRTTVIR 111
            F  V Q+RT+S          +SF   WL DKGAWPV+G+I GA+VF   +  + +M +PDVRI  + R   I+
Sbjct:   29 FARVQQLRTLSTSVPSGVRYGKSFSATWLGDKGAWPVIGIIGGALVFCGSFISNKIMFHPDVRITPSKRNADIQ 102          
BLAST of mRNA_H-paniculata_contig196.4972.1 vs. uniprot
Match: A0A836C9M1_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9M1_9STRA)

HSP 1 Score: 52.8 bits (125), Expect = 6.010e-7
Identity = 24/61 (39.34%), Postives = 38/61 (62.30%), Query Frame = 0
Query:   55 MSAQQSFQKN----WLSDKGAWPVLGVISGAVVFSSFWGISTLMTNPDVRINRTMRTTVIR 111
            MS+   + K+    WL D+GAWP++G+IS A+   +  G  TL  N DVR+++  R +V+R
Sbjct:    1 MSSGAQYNKSAKDIWLGDRGAWPIIGIISTALTVGTICGFRTLFFNSDVRVSKHSRKSVLR 61          
BLAST of mRNA_H-paniculata_contig196.4972.1 vs. uniprot
Match: A0A7S2UBZ7_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UBZ7_9STRA)

HSP 1 Score: 48.9 bits (115), Expect = 4.050e-5
Identity = 25/52 (48.08%), Postives = 36/52 (69.23%), Query Frame = 0
Query:   65 WLSDKGAWPVLGVISGAVVFSSFWGISTLMTNPDVRINRTMRTTVIRP-GKE 115
            WL+D GA+PV+ V+  A    +  G+ TLMTN DVR++R+ R +VIR  G+E
Sbjct:   49 WLADPGAYPVMFVVVFACSLCATVGVRTLMTNTDVRVDRSKRQSVIRTWGRE 100          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig196.4972.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 6
Match NameE-valueIdentityDescription
D7FSK8_ECTSI1.520e-2453.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A6H5KK83_9PHAE2.370e-2151.00Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A4D9DGT0_9STRA1.060e-843.24Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
W7TS82_9STRA4.750e-841.89Uncharacterized protein n=1 Tax=Nannochloropsis ga... [more]
A0A836C9M1_9STRA6.010e-739.34Uncharacterized protein n=1 Tax=Tribonema minus Ta... [more]
A0A7S2UBZ7_9STRA4.050e-548.08Hypothetical protein n=1 Tax=Attheya septentrional... [more]
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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR010530NADH-ubiquinone reductase complex 1 MLRQ subunitPFAMPF06522B12Dcoord: 69..108
e-value: 2.4E-6
score: 27.3
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..69
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 91..115
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 70..90
NoneNo IPR availableTMHMMTMhelixcoord: 71..93

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig196contigH-paniculata_contig196:23816..27953 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig196.4972.1mRNA_H-paniculata_contig196.4972.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig196 22556..28093 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig196.4972.1 ID=prot_H-paniculata_contig196.4972.1|Name=mRNA_H-paniculata_contig196.4972.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=116bp
MSVRVAHGFEELGTNRVCERYPRPKMSSALTSALRRAAVQPKAAPFRAVT
QMRTMSAQQSFQKNWLSDKGAWPVLGVISGAVVFSSFWGISTLMTNPDVR
INRTMRTTVIRPGKE*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR010530B12D