prot_H-paniculata_contig19572.4960.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig19572.4960.1 vs. uniprot
Match: UPI000539A888 (uncharacterized protein LOC104733287 n=1 Tax=Camelina sativa TaxID=90675 RepID=UPI000539A888) HSP 1 Score: 52.8 bits (125), Expect = 3.590e-6 Identity = 30/91 (32.97%), Postives = 48/91 (52.75%), Query Frame = 0
Query: 3 WVCDNGATKHMTHGPDFLCHYQECRG--RVRLADGSYLPIEEVGILFIHFRFDSKAVLMKLTQVAHVPPLTHHLLSLGRFADSDQRDTRLY 91
W+CD+GAT H+T L +Q G V +ADGS LPI G + + ++ + LT V +VP + +L+S+ R +++Q Y
Sbjct: 129 WICDSGATHHITSDLANLSLHQPYTGGEEVTIADGSGLPITHTGSALL----PTPSLSLALTDVLYVPNIAKNLISVYRLCNANQVSVHFY 215
BLAST of mRNA_H-paniculata_contig19572.4960.1 vs. uniprot
Match: A0A2P6R9W2_ROSCH (Putative RNA-directed DNA polymerase n=1 Tax=Rosa chinensis TaxID=74649 RepID=A0A2P6R9W2_ROSCH) HSP 1 Score: 53.1 bits (126), Expect = 4.370e-6 Identity = 30/87 (34.48%), Postives = 46/87 (52.87%), Query Frame = 0
Query: 1 EIWVCDNGATKHMTHGPDFLCHYQECRGRVRLA--DGSYLPIEEVGILFIHFRFDSKAVLMKLTQVAHVPPLTHHLLSLGRFA-DSD 84
W+ D+GA++H+T L G +L +G+ L I +G +H + + KLT V HVP +TH+LLS+ RF D+D
Sbjct: 379 STWLADSGASQHVTPDLSHLSEVTPYTGNAKLTVGNGNNLQIAHIGSSLMH----TPSASFKLTNVLHVPEITHNLLSVNRFVTDND 461
BLAST of mRNA_H-paniculata_contig19572.4960.1 vs. uniprot
Match: UPI00063AF487 (uncharacterized protein LOC105789013 isoform X1 n=3 Tax=Gossypium raimondii TaxID=29730 RepID=UPI00063AF487) HSP 1 Score: 49.7 bits (117), Expect = 7.070e-5 Identity = 30/93 (32.26%), Postives = 48/93 (51.61%), Query Frame = 0
Query: 1 EIWVCDNGATKHMTHGPDFLCHYQECRGR--VRLADGSYLPIEEVGILFIHFRFDSKAVLMKLTQVAHVPPLTHHLLSLGRFADSDQRDTRLY 91
IW D+GAT H+T L G+ V + +G +PI +G + ++A L++L V HVP + +L+S+G+FA RD +Y
Sbjct: 333 SIWYPDSGATNHITPEVSNLAAPSSYTGKSCVTMGNGDSVPIAHIGSTTL----STRAQLLRLQNVLHVPAVCKNLMSVGQFA----RDNNVY 417 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig19572.4960.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 3
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig19572.4960.1 ID=prot_H-paniculata_contig19572.4960.1|Name=mRNA_H-paniculata_contig19572.4960.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=91bpback to top |