prot_H-paniculata_contig1954.4947.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1954.4947.1
Unique Nameprot_H-paniculata_contig1954.4947.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length387
Homology
BLAST of mRNA_H-paniculata_contig1954.4947.1 vs. uniprot
Match: A0A7D9M6E1_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9M6E1_PARCT)

HSP 1 Score: 243 bits (621), Expect = 8.880e-74
Identity = 132/386 (34.20%), Postives = 223/386 (57.77%), Query Frame = 0
Query:    1 GLKQSDRNWNNTLGDILVGIGLQHSTTNPCLYFSRKKWGETDI-LVAVYVDDVVIAGRR-EKVDEFKHDISQHFRMIDLGSLSRVFGIEVRRGCPNGTISISQGGYIREVLKRYGSDECRGVPTPVEGKLTILELELADKPPEPRPLGAILSGIGAGVQESSSRRDANSTEYRGMAGSLMYASTGTRPDIAYAVHQAARRMGDPFREDFSTRKRIFRFLSTVPDLAIMFGDKSNGRGLEGFIDANWAEDVEDRKSTTGYVIKLNGGAISWCSRKQQLLVWSSTEAEYAAAGEAGNETVYLRDLLGFIDFGCRGSTALFEDNKSASNLSKGSDTYCRTKHIGVRWHGIREWIREGVLTLKYMHTGDQLADILKKGLSRVKFQRLRTL 384
            GLKQS R WN+ L + L  IG   + ++PC+Y   +   + DI +VA++VDD+++AG+  EK+ + K  I++ F++ D+G L  + G++V +   +G + I Q  Y   ++K+YG + C+ V TPV+                      + S + + +++S      N  EY+   GSL+Y S+ TRPDI +AV+  A+   +   E ++  KRIFR+L    +  +++ + +N   + GF DA+WA D+ DRKST+GY  ++NG A+SW S+KQ  +  S+ EAEY A   A  E +++R LL  ++        ++EDN+SA  +SK    + R+KHI +++H +R+ + +  LT+ Y  TG  LAD+  KG+ + +F++LR L
Sbjct:   22 GLKQSSRCWNSVLDEHLKSIGFTQTESDPCIYVKEE---DGDIFVVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVIQ--EDGKVWIGQPTYTASIIKKYGMENCKPVETPVD----------------------LSSKLVSAMEDSELF---NKEEYQSAVGSLLYLSSATRPDITFAVNNVAKFSANFTNEHWTAVKRIFRYLKKTVNYGLLYSENANPDCV-GFSDADWAGDLNDRKSTSGYTFQINGAAVSWRSKKQTCVALSTAEAEYVALSAAAQEALWMRQLLTDLNVNIDKPMTIYEDNQSAIAMSKNPQFHGRSKHIDIKYHFVRDQVEKKTLTVLYCPTGSMLADLFTKGIPKEQFKKLREL 376          
BLAST of mRNA_H-paniculata_contig1954.4947.1 vs. uniprot
Match: H3GB98_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=3 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB98_PHYRM)

HSP 1 Score: 240 bits (613), Expect = 5.150e-72
Identity = 131/385 (34.03%), Postives = 216/385 (56.10%), Query Frame = 0
Query:    1 GLKQSDRNWNNTLGDILVGIGLQHSTTNPCLYFSRKKWGETDILVAVYVDDVVIAGRREKVDEF-KHDISQHFRMIDLGSLSRVFGIEVRRGCPNGTISISQGGYIREVLKRYGSDECRGVPTPVEGKLTILELELADKPPEPRPLGAILSGIGAGVQESSSRRDANSTEYRGMAGSLMYASTGTRPDIAYAVHQAARRMGDPFREDFSTRKRIFRFLSTVPDLAIMFGDKSNGRGLEGFIDANWAEDVEDRKSTTGYVIKLNGGAISWCSRKQQLLVWSSTEAEYAAAGEAGNETVYLRDLLGFI-DFGCRGSTALFEDNKSASNLSKGSDTYCRTKHIGVRWHGIREWIREGVLTLKYMHTGDQLADILKKGLSRVKFQRLRT 383
            GLKQS R WN T+ D ++ +G +   ++ C+Y  R   G+  I VA+YVDD+V+A   +++ E  KH +S+ F M DLG L    G+E++    +G +++ Q  +++ +L ++G  + + V TP +  L + +                 +    G Q   + ++     YR + G+LMY    TRPD+A AV   ++   DP    +   KR+ R+L   P   + F  + +  G+ G+ DA+WA D+E R+ST+GY   +NGG ISW S+KQ+ +  SSTEAEY A  EA  E V+L+  L  + +     +  ++EDN+ +  L+K    + RTKHI +R+H +RE + +G + L+Y+ T D LAD++ K ++ V+FQ LR+
Sbjct:   42 GLKQSPRMWNQTIDDFMLKLGFKKCESDHCVYLKRD--GQDMIFVALYVDDLVLASSNDELLELTKHALSKRFEMTDLGELEYFLGMEIKNTRDSGKVTVRQTKFLKSILTKFGMQDSKPVKTPQDPGLKLTK-----------------NMCEGGCQHEDTMKN---VPYRSVVGALMYLMVATRPDLAAAVGVLSQFSADPCPTHWQALKRVLRYLQATPTHGLEFS-REDSLGMCGYSDADWAGDIESRRSTSGYAFMMNGGCISWRSKKQRTVALSSTEAEYMALSEATQEAVWLKVFLCELGEMASDEAVKIYEDNQGSIALAKNPQFHKRTKHIDIRYHFVREKVEDGQVVLQYVSTTDMLADMMTKAITAVQFQVLRS 403          
BLAST of mRNA_H-paniculata_contig1954.4947.1 vs. uniprot
Match: A0A498M2F0_LABRO (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Labeo rohita TaxID=84645 RepID=A0A498M2F0_LABRO)

HSP 1 Score: 245 bits (626), Expect = 6.870e-71
Identity = 139/385 (36.10%), Postives = 217/385 (56.36%), Query Frame = 0
Query:    1 GLKQSDRNWNNTLGDILVGIGLQHSTTNPCLYFSRKKWGETDILVAVYVDDVVIAGRREK-VDEFKHDISQHFRMIDLGSLSRVFGIEVRRGCPNGTISISQGGYIREVLKRYGSDECRGVPTPVEGKLTILELELADKPPEPRPLGAILSGIGAGVQESSSRRDANSTEYRGMAGSLMYASTGTRPDIAYAVHQAARRMGDPFREDFSTRKRIFRFLSTVPDLAIMFGDKSNGRGLEGFIDANWAEDVEDRKSTTGYVIKLNGGAISWCSRKQQLLVWSSTEAEYAAAGEAGNETVYLRDLLGFIDFGCRGSTALFEDNKSASNLSKGSDTYCRTKHIGVRWHGIREWIREGVLTLKYMHTGDQLADILKKGLSRVKFQRLRTL 384
            GLKQS R WN  L + L  +G   +T +PC+Y +    GE   ++AVYVDD+++AG  +K + E K  +++HF + D+G L+   G+++ +    G I + Q  Y   VLK++G +  + V TPV+    +                         V+ S      +  +++   GSL+Y ST TRPDIAYAV+  AR    P ++ ++  KRI R+L    +L +++ +K   +   GF DA+WA D  DRKS +GY+ +++G A+SW S+KQ  +  S+ EAEY A   A  E V++R L+  +     G T +FEDN+SA  ++K S  + R KHI +++H IRE I  GV+ L+Y +T D +AD+  KGLS+ KF +LR +
Sbjct:  388 GLKQSPRCWNIVLDEQLKKMGFVQTTGDPCIYTAAT--GEM-FIIAVYVDDILLAGCSDKRMMEVKKMLAKHFEIKDMGELTHFLGVKIIQKPETGEIWMGQATYAENVLKKFGMENSKPVSTPVDINTKL-------------------------VKHSDDSEVMDPKQFQSAVGSLLYLSTRTRPDIAYAVNNVARFCAKPTKQHWTAVKRIMRYLKGTLNLGLLY-NKDKPKECIGFSDADWAGDQNDRKSMSGYMFQISGAAVSWRSKKQTCVALSTAEAEYMALASAAQEAVWMRQLMTDLKVNQAGPTVMFEDNQSAICMAKNSQFHGRAKHIDIKYHFIREKIAGGVIDLQYCNTDDMVADMFTKGLSQEKFVKLREM 743          
BLAST of mRNA_H-paniculata_contig1954.4947.1 vs. uniprot
Match: A0A6S7HEL0_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 (Fragment) n=4 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HEL0_PARCT)

HSP 1 Score: 246 bits (627), Expect = 5.020e-69
Identity = 132/386 (34.20%), Postives = 223/386 (57.77%), Query Frame = 0
Query:    1 GLKQSDRNWNNTLGDILVGIGLQHSTTNPCLYFSRKKWGETDI-LVAVYVDDVVIAGRR-EKVDEFKHDISQHFRMIDLGSLSRVFGIEVRRGCPNGTISISQGGYIREVLKRYGSDECRGVPTPVEGKLTILELELADKPPEPRPLGAILSGIGAGVQESSSRRDANSTEYRGMAGSLMYASTGTRPDIAYAVHQAARRMGDPFREDFSTRKRIFRFLSTVPDLAIMFGDKSNGRGLEGFIDANWAEDVEDRKSTTGYVIKLNGGAISWCSRKQQLLVWSSTEAEYAAAGEAGNETVYLRDLLGFIDFGCRGSTALFEDNKSASNLSKGSDTYCRTKHIGVRWHGIREWIREGVLTLKYMHTGDQLADILKKGLSRVKFQRLRTL 384
            GLKQS R WN+ L + L  IG   + ++PC+Y   +   + DI +VA++VDD+++AG+  EK+ + K  I++ F++ D+G L  + G++V +   +  + I Q  Y   ++K+YG + C+ V TPV+                      + S + + +++S      N  EY+   GSL+Y S+ TRPDI +AV+  A+   +P  E ++  KRIFR+L    +  +++ + +N   + GF DA+WA D+ DRKST+GY  ++NG A+SW S+KQ  +  S+ EAEY A   A  E +++R LL  ++        ++EDN+SA  +SK    + R+KHI +++H +R+ + +  LT+ Y  TG  LAD+  KG+ + +F++LR L
Sbjct:  911 GLKQSSRCWNSVLDEHLKSIGFTQTESDPCIYVKEE---DGDIFVVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVIQ--EDAKVWIGQPTYTASIIKKYGMENCKPVETPVD----------------------LSSKLVSAIEDSELF---NKEEYQSAVGSLLYLSSATRPDITFAVNNVAKFSANPTNEHWTAVKRIFRYLKGTVNYGLLYSENANPDCV-GFSDADWAGDLNDRKSTSGYTFQINGAAVSWRSKKQTCVALSTAEAEYVALSAAAQEALWMRQLLTDLNVNIDEPMTIYEDNQSAIAMSKNPQFHGRSKHIDIKYHFVRDQVEKKTLTVLYCPTGSMLADLFTKGIPKEQFKKLREL 1265          
BLAST of mRNA_H-paniculata_contig1954.4947.1 vs. uniprot
Match: A0A7D9HZ03_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HZ03_PARCT)

HSP 1 Score: 238 bits (606), Expect = 1.080e-68
Identity = 128/385 (33.25%), Postives = 220/385 (57.14%), Query Frame = 0
Query:    1 GLKQSDRNWNNTLGDILVGIGLQHSTTNPCLYFSRKKWGETDILVAVYVDDVVIAGRR-EKVDEFKHDISQHFRMIDLGSLSRVFGIEVRRGCPNGTISISQGGYIREVLKRYGSDECRGVPTPVEGKLTILELELADKPPEPRPLGAILSGIGAGVQESSSRRDANSTEYRGMAGSLMYASTGTRPDIAYAVHQAARRMGDPFREDFSTRKRIFRFLSTVPDLAIMFGDKSNGRGLEGFIDANWAEDVEDRKSTTGYVIKLNGGAISWCSRKQQLLVWSSTEAEYAAAGEAGNETVYLRDLLGFIDFGCRGSTALFEDNKSASNLSKGSDTYCRTKHIGVRWHGIREWIREGVLTLKYMHTGDQLADILKKGLSRVKFQRLRTL 384
            GLKQS R WN+ L + L  IG   + ++PC+Y   K+      +VA++VDD+++AG+  EK+ + K  I++ F++ D+G L  + G++V +   +  + I Q  Y   ++K+YG + C+ V TPV+                      + S + + +++S      N  E++   GSL+Y S+ TRPDI +AV+  A+   +P  E ++  KRIFR+L    +  +++ + +N   + GF DA+WA D+ DRKST+GY  ++NG A+SW S+KQ  +  S+  AEY A   A  E +++R LL  ++        ++EDN+SA  +SK    + R+KHI ++++ +R+ + +  LT+ Y  TG  LAD+  KG+ + +F++LR L
Sbjct:  297 GLKQSSRCWNSVLDEHLKSIGFTQTESDPCIYV--KEEDGNIFVVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVIQ--EDAKVWIGQPTYTASIIKKYGMENCKPVETPVD----------------------LSSKLVSAMEDSELF---NKEEHQSAVGSLLYLSSATRPDITFAVNNVAKFSANPTNEHWTAVKRIFRYLKGTVNYGLLYSENANPDCV-GFSDADWAGDLNDRKSTSGYTFQINGAAVSWRSKKQTCVALSTAAAEYVALSAAAQEALWMRQLLTDLNVNIDEPMTIYEDNQSAIAMSKNPQFHGRSKHIDIKYYFVRDQVEKKTLTVLYCPTGSMLADLFTKGIPKEQFKKLREL 651          
BLAST of mRNA_H-paniculata_contig1954.4947.1 vs. uniprot
Match: A0A7D9KES8_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9KES8_PARCT)

HSP 1 Score: 238 bits (608), Expect = 1.110e-68
Identity = 136/385 (35.32%), Postives = 208/385 (54.03%), Query Frame = 0
Query:    1 GLKQSDRNWNNTLGDILVGIGLQHSTTNPCLYFSRKKWGETDILVAVYVDDVVIAGRRE-KVDEFKHDISQHFRMIDLGSLSRVFGIEVRRGCPNGTISISQGGYIREVLKRYGSDECRGVPTPVEGKLTILELELADKPPEPRPLGAILSGIGAGVQESSSRRDANSTEYRGMAGSLMYASTGTRPDIAYAVHQAARRMGDPFREDFSTRKRIFRFLSTVPDLAIMFGDKSNGRGLEGFIDANWAEDVEDRKSTTGYVIKLNGGAISWCSRKQQLLVWSSTEAEYAAAGEAGNETVYLRDLLGFIDFGCRGSTALFEDNKSASNLSKGSDTYCRTKHIGVRWHGIREWIREGVLTLKYMHTGDQLADILKKGLSRVKFQRLRTL 384
            GLKQS R WN+ L   L  +G   +T +PC+Y   K+ G    ++AVYVDD+++AG+ + K++E K  +++ F+M D+G L    G++V     +  I I Q  Y + VL+R+G +  +   TPV     + +                         + S R D     Y+   G L+Y ST TRPDIAYAV   AR   DP  E +   KRI R+L+   D+ +++          G+ DA+WA D++DRKST+GYV +++  AISW S+KQ  +  S+ EAEY A   A  E V+L+ LL  +     G   + EDN++A  ++K +  + R KHI +++H IRE +    + L+Y  T + +ADI  KGLS V+F +LR +
Sbjct:  133 GLKQSPRCWNSVLDRKLKNMGFVQTTGDPCIYV--KEEGGEIFIIAVYVDDILLAGKNDQKINEVKQALAEQFQMKDMGQLHYFLGVKVIPKPDSKEIWIGQEAYTKSVLERFGMESSKPASTPVNPGTKLKK-----------------------AADDSQRVD--QVNYQCAVGHLLYLSTKTRPDIAYAVSDVARFSADPTEEHWIAVKRIMRYLNGTRDMGLLYDGSKTTTSCVGYSDADWAGDLDDRKSTSGYVFQISNAAISWRSKKQSCVALSTAEAEYMALASATQEAVWLQQLLSDLKSKPTGPMLILEDNQAAICMAKNAQYHGRAKHIDIKYHFIREHVASAAVKLEYCSTEEMIADIFTKGLSVVQFTKLRKM 490          
BLAST of mRNA_H-paniculata_contig1954.4947.1 vs. uniprot
Match: A0A0C9VSW1_SPHS4 (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Sphaerobolus stellatus (strain SS14) TaxID=990650 RepID=A0A0C9VSW1_SPHS4)

HSP 1 Score: 238 bits (608), Expect = 1.660e-68
Identity = 140/381 (36.75%), Postives = 203/381 (53.28%), Query Frame = 0
Query:    1 GLKQSDRNWNNTLGDILVGIGLQHSTTNPCLYFSRKKWGETDILVAVYVDDVVI-AGRREKVDEFKHDISQHFRMIDLGSLSRVFGIEVRRGCPNGTISISQGGYIREVLKRYGSDECRGVPTPVEGKLTILELELADKPPEPRPLGAILSGIGAGVQESSSRRDANSTEYRGMAGSLMYASTGTRPDIAYAVHQAARRMGDPFREDFSTRKRIFRFLSTVPDLAIMFGDKSNGRGLEGFIDANWAEDVEDRKSTTGYVIKLNGGAISWCSRKQQLLVWSSTEAEYAAAGEAGNETVYLRDLLGFIDFGCRGSTALFEDNKSASNLSKGSDTYCRTKHIGVRWHGIREWIREGVLTLKYMHTGDQLADILKKGLSRVKFQR 380
            GLKQ+ R W   L      +G +   +N  ++   K      ++VAVYVDD++I +   E V + K D+   F M DLG    + G+E+ R  P+ T+SISQ  Y  E+L+R+G  +C+  PTP+E  +++ +L                           S  + +S  Y+   GSLMY   GT PD+A++V   ++    P  E     KR+ R++    DL ++F    N + +E FIDA+WA+D  +R S TGYV  L G  ISW S+KQ     SSTEAEY AA  A  E ++LR  +  + F     T L+ DN+SA  L K S+ + RTKHI VR+H IRE + +  + L Y+ T DQ+AD L KGLS+VK  +
Sbjct:  353 GLKQASREWYKKLCTEFESMGFRRCNSNHAVFI--KDDNGIRVVVAVYVDDLLIFSSSIEAVKKVKKDLKGKFEMTDLGEAHWILGMEITRDRPSHTLSISQKAYFAEILERFGMSDCKPAPTPMEVGVSLRKL---------------------------SEAEVDSQHYQSAVGSLMYGMIGTHPDVAHSVGVLSQHCATPGEEHEKGNKRVLRYIKGTTDLGLVFIGSGNTK-IEVFIDADWAQDKNNRHSLTGYVCTLAGATISWSSKKQSSTAQSSTEAEYMAATHAAKEALWLRMFMRELGFEQDSPTPLYVDNQSAITLVKNSEFHSRTKHINVRYHFIRENVEDEQIELVYIPTEDQVADALTKGLSKVKLDK 703          
BLAST of mRNA_H-paniculata_contig1954.4947.1 vs. uniprot
Match: A0A1M2VV58_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2VV58_TRAPU)

HSP 1 Score: 244 bits (622), Expect = 3.030e-68
Identity = 147/396 (37.12%), Postives = 210/396 (53.03%), Query Frame = 0
Query:    1 GLKQSDRNWNNTLGDILVGIGLQHSTTNPCLYFSRKKWGETDILVAVYVDDVVIAGR-REKVDEFKHDISQHFRMIDLGSLSRVFGIEVRRGCPNGTISISQGGYIREVLKRYGSDECRGVPTPVEGKLTILELELADKPPEPRPLGAILSGIGAGVQESSSRRDANSTEYRGMAGSLMYASTGTRPDIAYAVHQAARRMGDPFREDFSTRKRIFRFLSTVPDLAIMF---GDKSNGRGLEGFIDANWAEDVEDRKSTTGYVIKLNGGAISWCSRKQQLLVWSSTEAEYAAAGEAGNETVYLRDLLGFIDF---------GCRGSTALFEDNKSASNLSKGSDTYCRTKHIGVRWHGIREWIREGVLTLKYMHTGDQLADILKKGLSRVKFQRLRT 383
            GLKQ+ R W   +      +G + S  +  ++   K      +++A+YVDD++IAG  R  +D FK  +S+ F M DLGS   + G+E+ R     T+SISQ  YI ++L+R+G   CR V TP+E  L + +L  A   P+P                           Y+   GSLMYA  G+RPD+A+AV   ++    P  + +    R+FR+L    DL + +    + SNG    G+ DA+WA DV DR+ST+G    L+GGA+SW S+KQQ +  SSTEAEY A   A  E ++LR LL  +           G + +  L  DN+SA  L+K S  + RTKHI VR H IR+ I  G L  +Y+ T DQ+AD+L K L+R K  R  T
Sbjct: 1138 GLKQASREWYKKIRSEFEDLGFERSDADHSIFV--KVENGVILIIALYVDDMLIAGNDRTTIDAFKSTLSERFEMTDLGSARWILGMEIERDRARHTLSISQAQYIEKILERHGMANCRPVSTPMEPNLKLEKLSEATIDPKP---------------------------YQSALGSLMYAMLGSRPDLAFAVGALSKHSATPGPQHWKALMRVFRYLRGSSDLCLSYKPDSEHSNGATPLGYCDADWAGDVNDRRSTSGQAFFLHGGAVSWQSKKQQSIAQSSTEAEYVALASAAKEALWLRALLDDLAIPASISRSSPGSKVTPLLLVDNQSAMALAKNSTFHDRTKHIAVRHHFIRDEIERGTLEAEYVPTDDQVADVLTKALAREKHVRFTT 1504          
BLAST of mRNA_H-paniculata_contig1954.4947.1 vs. uniprot
Match: H3H8W9_PHYRM (Integrase catalytic domain-containing protein n=3 Tax=Phytophthora ramorum TaxID=164328 RepID=H3H8W9_PHYRM)

HSP 1 Score: 239 bits (610), Expect = 3.890e-68
Identity = 130/385 (33.77%), Postives = 215/385 (55.84%), Query Frame = 0
Query:    1 GLKQSDRNWNNTLGDILVGIGLQHSTTNPCLYFSRKKWGETDILVAVYVDDVVIAGRREKV-DEFKHDISQHFRMIDLGSLSRVFGIEVRRGCPNGTISISQGGYIREVLKRYGSDECRGVPTPVEGKLTILELELADKPPEPRPLGAILSGIGAGVQESSSRRDANSTEYRGMAGSLMYASTGTRPDIAYAVHQAARRMGDPFREDFSTRKRIFRFLSTVPDLAIMFGDKSNGRGLEGFIDANWAEDVEDRKSTTGYVIKLNGGAISWCSRKQQLLVWSSTEAEYAAAGEAGNETVYLRDLLGFI-DFGCRGSTALFEDNKSASNLSKGSDTYCRTKHIGVRWHGIREWIREGVLTLKYMHTGDQLADILKKGLSRVKFQRLRT 383
            GLKQS R WN T+ D ++ +G +   ++ C+Y  R   G+  I VA+YVDD+V+A   +++ +  KH +S+ F M DLG L    G+E++    +G +++ Q  +++ +L ++G  + + V TP +  L + +                 +    G Q   + ++     YR   G+LMY    TRPD+A AV   ++   DP    +   KR+ R+L   P   + F  + +  G+ G+ DA+WA D+E R+ST+GY   +NGG ISW S+KQ+ +  SSTEAEY A  EA  E V+L+  L  + +     +  ++EDN+ +  L+K    + RTKHI +R+H +RE + +G + L+Y+ T D LAD++ K ++ V+FQ LR+
Sbjct:  443 GLKQSPRMWNQTIDDFMLKLGFKKCESDHCVYLKRD--GQDMIFVALYVDDLVLASSNDELLESTKHALSKRFEMTDLGELEYFLGMEIKNDHGSGKVTVRQTKFLKSILTKFGMQDSKPVKTPQDPGLKLTK-----------------NMCEGGCQHEDTMKN---VPYRSAVGALMYLMVATRPDLAAAVGVLSQFSADPCPTHWQALKRVLRYLQATPTHGLEFS-REDSLGMCGYSDADWAGDIESRRSTSGYAFMMNGGCISWRSKKQRTVALSSTEAEYMALSEATQEAVWLKVFLCELGEMASDEAVKIYEDNQGSIALAKNPQFHKRTKHIDIRYHFVREKVEDGQVVLQYVSTTDMLADMMTKAITAVQFQVLRS 804          
BLAST of mRNA_H-paniculata_contig1954.4947.1 vs. uniprot
Match: A0A8K1FHK1_PYTOL (Uncharacterized protein n=3 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FHK1_PYTOL)

HSP 1 Score: 242 bits (617), Expect = 1.340e-67
Identity = 139/386 (36.01%), Postives = 211/386 (54.66%), Query Frame = 0
Query:    1 GLKQSDRNWNNTLGDILVGIGLQHSTTNPCLYFSRKKWGETDILVAVYVDDVVIA-GRREKVDEFKHDISQHFRMIDLGSLSRVFGIEVRRGCPNGTISISQGGYIREVLKRYGSDECRGVPTPVEGKLTILELELADKPPEPRPLGAILSGIGAGVQESSSRRDANSTEYRGMAGSLMYASTGTRPDIAYAVHQAARRMGDPFREDFSTRKRIFRFLSTVPDLAIMFGDKSNGRGLEGFIDANWAEDVEDRKSTTGYVIKLNGGAISWCSRKQQLLVWSSTEAEYAAAGEAGNETVYLRDLLGFI--DFGCRGSTALFEDNKSASNLSKGSDTYCRTKHIGVRWHGIREWIREGVLTLKYMHTGDQLADILKKGLSRVKFQRLRT 383
            GLKQS R WN T+ + +  IG      + C+Y  R       + V +YVDD+++A   ++ +   K  +S+ F M DLG L    G+EV+R   +G +S+ Q  +++ VL ++G  +C+ V TP +  L + +                 S    G +   + +D     YR   G+LMY   GTRPD+A +V   ++   DP    +   KR+ R+L   P   I F   S+G  L G+ DA+WA D+E R+ST+GYV  LNGG ISW S+KQ+ +  SSTEAEY A  EA  E V+L+  +  +  D G  G+  +FEDN+ A  L+K  + + RTKHI +R+H +RE + +G + L+Y  T + LAD++ K L+  +F  LRT
Sbjct: 1015 GLKQSPRMWNQTIDEFMRKIGFTKCNMDHCVYVKRND--SATMFVVIYVDDLILACNNKDLLAATKRALSERFEMSDLGELKYCLGMEVKRDDKSGDVSMRQTKFVQSVLTKFGMQDCKPVKTPQDPGLKLTK-----------------SMCEGGCKHDETMKD---VPYRNAVGALMYLMVGTRPDLAASVGTLSQFAADPCPTHWQALKRVLRYLQATPMHGICFSGSSDGE-LIGYSDADWAGDIETRRSTSGYVSVLNGGCISWRSKKQRTVALSSTEAEYMALSEATQEAVWLKSFMCELGEDSG-NGALTVFEDNQGAIALAKNPEFHKRTKHIDIRYHFVREKVEDGQVVLEYCPTQEMLADLMTKPLAAAQFDALRT 1376          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1954.4947.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A7D9M6E1_PARCT8.880e-7434.20Reverse transcriptase Ty1/copia-type domain-contai... [more]
H3GB98_PHYRM5.150e-7234.03Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A498M2F0_LABRO6.870e-7136.10Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A6S7HEL0_PARCT5.020e-6934.20Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A7D9HZ03_PARCT1.080e-6833.25Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A7D9KES8_PARCT1.110e-6835.32Retrovirus-related Pol poly from transposon TNT 1-... [more]
A0A0C9VSW1_SPHS41.660e-6836.75Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A1M2VV58_TRAPU3.030e-6837.12Retrovirus-related Pol polyprotein from transposon... [more]
H3H8W9_PHYRM3.890e-6833.77Integrase catalytic domain-containing protein n=3 ... [more]
A0A8K1FHK1_PYTOL1.340e-6736.01Uncharacterized protein n=3 Tax=Pythium oligandrum... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 1..124
e-value: 7.5E-22
score: 78.2
IPR039537Retrotransposon Ty1/copia-likePANTHERPTHR11439GAG-POL-RELATED RETROTRANSPOSONcoord: 165..379
NoneNo IPR availablePANTHERPTHR11439:SF275coord: 165..379

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1954contigH-paniculata_contig1954:3426..4586 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1954.4947.1mRNA_H-paniculata_contig1954.4947.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1954 3426..4586 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1954.4947.1 ID=prot_H-paniculata_contig1954.4947.1|Name=mRNA_H-paniculata_contig1954.4947.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=387bp
GLKQSDRNWNNTLGDILVGIGLQHSTTNPCLYFSRKKWGETDILVAVYVD
DVVIAGRREKVDEFKHDISQHFRMIDLGSLSRVFGIEVRRGCPNGTISIS
QGGYIREVLKRYGSDECRGVPTPVEGKLTILELELADKPPEPRPLGAILS
GIGAGVQESSSRRDANSTEYRGMAGSLMYASTGTRPDIAYAVHQAARRMG
DPFREDFSTRKRIFRFLSTVPDLAIMFGDKSNGRGLEGFIDANWAEDVED
RKSTTGYVIKLNGGAISWCSRKQQLLVWSSTEAEYAAAGEAGNETVYLRD
LLGFIDFGCRGSTALFEDNKSASNLSKGSDTYCRTKHIGVRWHGIREWIR
EGVLTLKYMHTGDQLADILKKGLSRVKFQRLRTLFM*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2
IPR039537Retrotran_Ty1/copia-like