prot_H-paniculata_contig1950.4936.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1950.4936.1
Unique Nameprot_H-paniculata_contig1950.4936.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length115
Homology
BLAST of mRNA_H-paniculata_contig1950.4936.1 vs. uniprot
Match: D8LIP0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LIP0_ECTSI)

HSP 1 Score: 187 bits (475), Expect = 1.290e-54
Identity = 94/107 (87.85%), Postives = 101/107 (94.39%), Query Frame = 0
Query:    1 DGAVVPGGGAFEVAASLSLQNFKTTVKGRAKLGIEAYAEAMLVVPKTLAENSGFDVQESVIKLVDEHMESSAPVGLDLMTGEAMLPEQEGVWDNYCVKRQSLHLSTV 107
            D AVVPG GAFEVAA+LSLQ FKTTVKGRAKLGIEA+AEA+++VPKTLAENSGFDVQ+SVIKLVDEH+ES A VGLDLMTGE MLPEQEGVWDNYCVKRQSLHLSTV
Sbjct:  407 DQAVVPGAGAFEVAANLSLQKFKTTVKGRAKLGIEAFAEALMIVPKTLAENSGFDVQDSVIKLVDEHVESGAAVGLDLMTGEPMLPEQEGVWDNYCVKRQSLHLSTV 513          
BLAST of mRNA_H-paniculata_contig1950.4936.1 vs. uniprot
Match: A0A2P4XTS7_9STRA (T-complex protein 1, zeta subunit (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XTS7_9STRA)

HSP 1 Score: 142 bits (357), Expect = 7.740e-41
Identity = 67/106 (63.21%), Postives = 86/106 (81.13%), Query Frame = 0
Query:    1 DGAVVPGGGAFEVAASLSLQNFKTTVKGRAKLGIEAYAEAMLVVPKTLAENSGFDVQESVIKLVDEHMESSAPVGLDLMTGEAMLPEQEGVWDNYCVKRQSLHLST 106
            D  VVPG  AFE+AA+ +L  FK TVKGRAKLG++A+A+A+LV+PK LAENSG DVQ+++I + +EH  S  PVG+DL +GE MLPEQEG+WDNY VKRQ +HL+T
Sbjct:   38 DKGVVPGAAAFELAANEALNKFKGTVKGRAKLGVQAFADALLVIPKVLAENSGLDVQDTLIAVQEEHQNSGMPVGIDLFSGEPMLPEQEGIWDNYRVKRQFIHLAT 143          
BLAST of mRNA_H-paniculata_contig1950.4936.1 vs. uniprot
Match: A0A7S2MSB4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2MSB4_9STRA)

HSP 1 Score: 150 bits (378), Expect = 1.760e-40
Identity = 70/107 (65.42%), Postives = 92/107 (85.98%), Query Frame = 0
Query:    1 DGAVVPGGGAFEVAASLSLQNFKTTVKGRAKLGIEAYAEAMLVVPKTLAENSGFDVQESVIKLVDEHMESSAPVGLDLMTGEAMLPEQEGVWDNYCVKRQSLHLSTV 107
            D  VVPGGGAFE AA +SL+ FK TVKG+AK+G++A+A+++L+ PK LAENSGFDVQ+++I+L +EH++S A VGLDL+TG+ MLPE EGVWDNY VKRQ +HLST+
Sbjct:  414 DSGVVPGGGAFETAAYVSLRAFKDTVKGKAKIGVQAFADSLLITPKVLAENSGFDVQDTIIQLEEEHIKSGAAVGLDLITGDVMLPEAEGVWDNYRVKRQYIHLSTM 520          
BLAST of mRNA_H-paniculata_contig1950.4936.1 vs. uniprot
Match: A0A7S2V196_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V196_9STRA)

HSP 1 Score: 144 bits (362), Expect = 3.260e-38
Identity = 73/110 (66.36%), Postives = 90/110 (81.82%), Query Frame = 0
Query:    1 DGAVVPGGGAFEVAASLSLQNFKTTVKGRAKLGIEAYAEAMLVVPKTLAENSGFDVQESVIKLVDEHMES---SAPVGLDLMTGEAMLPEQEGVWDNYCVKRQSLHLSTV 107
            DG  VPGGGA EVAA+  L  +K  V+G+AKLGI+A+A+A+LV+PKTLAENSGFDVQ+S+IK+ DE  ++   +  VGLDLMTGE MLP+QEG+WDNY VKRQ LHLSTV
Sbjct:  405 DGHAVPGGGALEVAAAADLFEYKHAVEGKAKLGIQAFADALLVIPKTLAENSGFDVQDSLIKVQDEQRKAGGGAVAVGLDLMTGEPMLPDQEGIWDNYRVKRQFLHLSTV 514          
BLAST of mRNA_H-paniculata_contig1950.4936.1 vs. uniprot
Match: A0A7R9YD60_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YD60_9STRA)

HSP 1 Score: 142 bits (359), Expect = 9.820e-38
Identity = 67/108 (62.04%), Postives = 88/108 (81.48%), Query Frame = 0
Query:    1 DGAVVPGGGAFEVAASLSLQNFKTT-VKGRAKLGIEAYAEAMLVVPKTLAENSGFDVQESVIKLVDEHMESSAPVGLDLMTGEAMLPEQEGVWDNYCVKRQSLHLSTV 107
            DGAV+PGGGAFE+AA+ SL  FK   ++GRAK+G++A+A+A+L++PK LAENSGFDVQE +I+L +EH      VGLD+ TGE MLP+QEG+WD+Y VKRQ LHL T+
Sbjct:  418 DGAVIPGGGAFEIAAAESLMRFKRDEIRGRAKIGVQAFADALLIIPKVLAENSGFDVQECLIQLEEEHRNRGVAVGLDVNTGEPMLPDQEGIWDSYSVKRQCLHLCTI 525          
BLAST of mRNA_H-paniculata_contig1950.4936.1 vs. uniprot
Match: A0A4D9CV25_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CV25_9STRA)

HSP 1 Score: 142 bits (357), Expect = 1.620e-37
Identity = 70/107 (65.42%), Postives = 87/107 (81.31%), Query Frame = 0
Query:    1 DGAVVPGGGAFEVAASLSLQNFKTTVKGRAKLGIEAYAEAMLVVPKTLAENSGFDVQESVIKLVDEHMESSAPVGLDLMTGEAMLPEQEGVWDNYCVKRQSLHLSTV 107
            D A+VPGGG+FEVAAS  LQ +K TV G+ KLG+ A+AEA+LVVPKTLAENSGFDVQ+++I L++EH ++   VGLD+ TGE M P   GVWDNY VKRQSLHL+T+
Sbjct:  406 DKALVPGGGSFEVAASHMLQAYKETVSGKPKLGVVAFAEALLVVPKTLAENSGFDVQDTLIALLEEHAKTGIAVGLDVTTGEGMAPAMVGVWDNYRVKRQSLHLATI 512          
BLAST of mRNA_H-paniculata_contig1950.4936.1 vs. uniprot
Match: A7RLY5_NEMVE (Predicted protein n=2 Tax=Nematostella vectensis TaxID=45351 RepID=A7RLY5_NEMVE)

HSP 1 Score: 140 bits (354), Expect = 4.040e-37
Identity = 66/107 (61.68%), Postives = 88/107 (82.24%), Query Frame = 0
Query:    1 DGAVVPGGGAFEVAASLSLQNFKTTVKGRAKLGIEAYAEAMLVVPKTLAENSGFDVQESVIKLVDEHMESSAPVGLDLMTGEAMLPEQEGVWDNYCVKRQSLHLSTV 107
            DG VVPG GA E+A   +L +FK TVKGRA+LG++A+A+A+LV+PKTLA+NSGFD QE+++KL++E+ +S+ PVG+DL +GEAM+P   GVWDNY VKRQ LH  TV
Sbjct:  406 DGCVVPGAGALEIAIHAALIDFKKTVKGRARLGVQAFADALLVIPKTLAQNSGFDPQETMVKLLEEYADSNTPVGVDLSSGEAMIPADAGVWDNYRVKRQLLHSCTV 512          
BLAST of mRNA_H-paniculata_contig1950.4936.1 vs. uniprot
Match: A0A6V1PFD7_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1PFD7_HETAK)

HSP 1 Score: 140 bits (354), Expect = 4.400e-37
Identity = 74/110 (67.27%), Postives = 90/110 (81.82%), Query Frame = 0
Query:    1 DGAVVPGGGAFEVAASLSLQNFKTT-VKGRAKLGIEAYAEAMLVVPKTLAENSGFDVQESVIKLVDEHMES--SAPVGLDLMTGEAMLPEQEGVWDNYCVKRQSLHLSTV 107
            DGAVVPG GAFEVAA+  LQ +    VKGRAKLG+ AYA+A+LVVPKTLAENSG DVQ+++I++ D   ++  +APVGLDL+TGE M P+QEG+WDNY VKRQ LHLSTV
Sbjct:  404 DGAVVPGAGAFEVAAAADLQAYAAAEVKGRAKLGVAAYADALLVVPKTLAENSGLDVQDALIQMQDALRDNGGAAPVGLDLVTGEPMAPDQEGIWDNYRVKRQFLHLSTV 513          
BLAST of mRNA_H-paniculata_contig1950.4936.1 vs. uniprot
Match: A0A7S2BN96_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BN96_9STRA)

HSP 1 Score: 140 bits (354), Expect = 4.440e-37
Identity = 68/106 (64.15%), Postives = 85/106 (80.19%), Query Frame = 0
Query:    1 DGAVVPGGGAFEVAASLSLQNFKTTVKGRAKLGIEAYAEAMLVVPKTLAENSGFDVQESVIKLVDEHMESSAPVGLDLMTGEAMLPEQEGVWDNYCVKRQSLHLST 106
            D AVV G GAFE AA  SL  FK TV G+AKLG++AYA+AML++PK L+ENSGFDVQ+S+I L +EH ++ A +GLDL+TGE +LP  EG+WDNY VKRQ +HLST
Sbjct:  407 DKAVVAGAGAFETAAYTSLMAFKGTVSGKAKLGVQAYADAMLIIPKVLSENSGFDVQDSIIALQEEHEKAGAAIGLDLVTGECILPAAEGIWDNYRVKRQYIHLST 512          
BLAST of mRNA_H-paniculata_contig1950.4936.1 vs. uniprot
Match: A0A7S2WV07_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WV07_9STRA)

HSP 1 Score: 140 bits (353), Expect = 6.110e-37
Identity = 69/107 (64.49%), Postives = 88/107 (82.24%), Query Frame = 0
Query:    1 DGAVVPGGGAFEVAASLSLQNFKTTVKGRAKLGIEAYAEAMLVVPKTLAENSGFDVQESVIKLVDEHMESSAPVGLDLMTGEAMLPEQEGVWDNYCVKRQSLHLSTV 107
            D AVV G GA+E AA LSLQ FK++V G+AKLG+EA+A AMLV+PK LAENSGFD+Q+S+I + +E  +S A VGLD++TG+ MLPE EG++DNY VKRQ +HLSTV
Sbjct:  407 DEAVVAGAGAYENAAYLSLQQFKSSVSGKAKLGVEAFANAMLVIPKVLAENSGFDIQDSIISMQEEREKSGAAVGLDVVTGDVMLPEVEGIYDNYRVKRQCIHLSTV 513          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1950.4936.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LIP0_ECTSI1.290e-5487.85Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
A0A2P4XTS7_9STRA7.740e-4163.21T-complex protein 1, zeta subunit (Fragment) n=1 T... [more]
A0A7S2MSB4_9STRA1.760e-4065.42Hypothetical protein n=1 Tax=Dictyocha speculum Ta... [more]
A0A7S2V196_9STRA3.260e-3866.36Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A7R9YD60_9STRA9.820e-3862.04Hypothetical protein n=1 Tax=Pinguiococcus pyrenoi... [more]
A0A4D9CV25_9STRA1.620e-3765.42Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A7RLY5_NEMVE4.040e-3761.68Predicted protein n=2 Tax=Nematostella vectensis T... [more]
A0A6V1PFD7_HETAK4.400e-3767.27Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
A0A7S2BN96_9STRA4.440e-3764.15Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A7S2WV07_9STRA6.110e-3764.49Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR027413GroEL-like equatorial domain superfamilyGENE3D1.10.560.10coord: 4..106
e-value: 8.9E-33
score: 116.0
IPR027413GroEL-like equatorial domain superfamilySUPERFAMILY48592GroEL equatorial domain-likecoord: 3..107
IPR002423Chaperonin Cpn60/TCP-1 familyPFAMPF00118Cpn60_TCP1coord: 2..106
e-value: 2.1E-30
score: 105.8
NoneNo IPR availablePANTHERPTHR11353:SF21T-COMPLEX PROTEIN 1 SUBUNIT ZETAcoord: 1..107
NoneNo IPR availablePANTHERPTHR11353CHAPERONINcoord: 1..107

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1950contigH-paniculata_contig1950:20745..22592 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1950.4936.1mRNA_H-paniculata_contig1950.4936.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1950 20745..22592 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1950.4936.1 ID=prot_H-paniculata_contig1950.4936.1|Name=mRNA_H-paniculata_contig1950.4936.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=115bp
DGAVVPGGGAFEVAASLSLQNFKTTVKGRAKLGIEAYAEAMLVVPKTLAE
NSGFDVQESVIKLVDEHMESSAPVGLDLMTGEAMLPEQEGVWDNYCVKRQ
SLHLSTVSEICMPA*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR027413GROEL-like_equatorial_sf
IPR002423Cpn60/TCP-1