prot_H-paniculata_contig19404.4906.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig19404.4906.1
Unique Nameprot_H-paniculata_contig19404.4906.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length89
Homology
BLAST of mRNA_H-paniculata_contig19404.4906.1 vs. uniprot
Match: A0A0H5B939_9PHAE (Photosystem I P700 apoprotein A2 (Fragment) n=1 Tax=Ralfsia verrucosa TaxID=371971 RepID=A0A0H5B939_9PHAE)

HSP 1 Score: 85.1 bits (209), Expect = 5.240e-19
Identity = 39/43 (90.70%), Postives = 42/43 (97.67%), Query Frame = 0
Query:   44 AFMAEEFTIQAALYTHHQYIAGFLMMGAFAHGAIFFVRDYDPE 86
            AFMA++FT QAALYTHHQYIAGFLM+GAFAHGAIFFVRDYDPE
Sbjct:   38 AFMAKDFTTQAALYTHHQYIAGFLMVGAFAHGAIFFVRDYDPE 80          
BLAST of mRNA_H-paniculata_contig19404.4906.1 vs. uniprot
Match: A0A2H5PG69_CITUN (Uncharacterized protein n=1 Tax=Citrus unshiu TaxID=55188 RepID=A0A2H5PG69_CITUN)

HSP 1 Score: 80.5 bits (197), Expect = 3.060e-18
Identity = 35/44 (79.55%), Postives = 42/44 (95.45%), Query Frame = 0
Query:   44 AFMAEEFTIQAALYTHHQYIAGFLMMGAFAHGAIFFVRDYDPEK 87
            AF+A++FT QAALYTHHQYIAGF+M GAFAHGAIFF+RDY+PE+
Sbjct:    8 AFIAQDFTTQAALYTHHQYIAGFIMTGAFAHGAIFFIRDYNPEQ 51          
BLAST of mRNA_H-paniculata_contig19404.4906.1 vs. uniprot
Match: A0A830DGM8_9LAMI (Photosystem i p700 chlorophyll a apoprotein a2 n=1 Tax=Phtheirospermum japonicum TaxID=374723 RepID=A0A830DGM8_9LAMI)

HSP 1 Score: 80.5 bits (197), Expect = 3.400e-18
Identity = 35/44 (79.55%), Postives = 42/44 (95.45%), Query Frame = 0
Query:   44 AFMAEEFTIQAALYTHHQYIAGFLMMGAFAHGAIFFVRDYDPEK 87
            AF+A++FT QAALYTHHQYIAGF+M GAFAHGAIFF+RDY+PE+
Sbjct:    8 AFIAQDFTTQAALYTHHQYIAGFIMTGAFAHGAIFFIRDYNPEQ 51          
BLAST of mRNA_H-paniculata_contig19404.4906.1 vs. uniprot
Match: A0A7T7DA50_9STRA (Photosystem I (Fragment) n=2 Tax=Phaeosacciales TaxID=2797541 RepID=A0A7T7DA50_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 3.530e-18
Identity = 39/43 (90.70%), Postives = 42/43 (97.67%), Query Frame = 0
Query:   44 AFMAEEFTIQAALYTHHQYIAGFLMMGAFAHGAIFFVRDYDPE 86
            AFMA++FT QAALYTHHQYIAGFLM+GAFAHGAIFFVRDYDPE
Sbjct:   32 AFMAKDFTTQAALYTHHQYIAGFLMVGAFAHGAIFFVRDYDPE 74          
BLAST of mRNA_H-paniculata_contig19404.4906.1 vs. uniprot
Match: A0A2L1DF55_9FLOR (PSI P700 apoprotein A2 (Fragment) n=1 Tax=Atractophora hypnoides TaxID=173450 RepID=A0A2L1DF55_9FLOR)

HSP 1 Score: 85.5 bits (210), Expect = 4.190e-18
Identity = 38/44 (86.36%), Postives = 43/44 (97.73%), Query Frame = 0
Query:   44 AFMAEEFTIQAALYTHHQYIAGFLMMGAFAHGAIFFVRDYDPEK 87
            AFMA++FT QAALYTHHQYIAGFLM+G+FAHGAIFF+RDYDPEK
Sbjct:  193 AFMAKDFTTQAALYTHHQYIAGFLMVGSFAHGAIFFIRDYDPEK 236          
BLAST of mRNA_H-paniculata_contig19404.4906.1 vs. uniprot
Match: A0A7T7IGN1_9STRA (PsaB (Fragment) n=1 Tax=Phaeothamnion wetherbeei TaxID=2569897 RepID=A0A7T7IGN1_9STRA)

HSP 1 Score: 85.1 bits (209), Expect = 6.100e-18
Identity = 39/43 (90.70%), Postives = 42/43 (97.67%), Query Frame = 0
Query:   44 AFMAEEFTIQAALYTHHQYIAGFLMMGAFAHGAIFFVRDYDPE 86
            AFMA++FT QAALYTHHQYIAGFLM+GAFAHGAIFFVRDYDPE
Sbjct:  170 AFMAKDFTTQAALYTHHQYIAGFLMVGAFAHGAIFFVRDYDPE 212          
BLAST of mRNA_H-paniculata_contig19404.4906.1 vs. uniprot
Match: A0A0A7M1C6_9STRA (Photosystem I P700 apoprotein A2 (Fragment) n=1 Tax=Ankylochrysis lutea TaxID=296670 RepID=A0A0A7M1C6_9STRA)

HSP 1 Score: 82.4 bits (202), Expect = 7.990e-18
Identity = 39/50 (78.00%), Postives = 44/50 (88.00%), Query Frame = 0
Query:   37 MFLEEAGAFMAEEFTIQAALYTHHQYIAGFLMMGAFAHGAIFFVRDYDPE 86
            M+   A AF+A++F  QAALYTHHQYIAGFLM+GAFAHGAIFFVRDYDPE
Sbjct:   62 MYALPAYAFIAKDFVTQAALYTHHQYIAGFLMLGAFAHGAIFFVRDYDPE 111          
BLAST of mRNA_H-paniculata_contig19404.4906.1 vs. uniprot
Match: A0A7T7IGN4_9STRA (PsaB (Fragment) n=2 Tax=Ochrophyta TaxID=2696291 RepID=A0A7T7IGN4_9STRA)

HSP 1 Score: 83.6 bits (205), Expect = 8.000e-18
Identity = 38/43 (88.37%), Postives = 42/43 (97.67%), Query Frame = 0
Query:   44 AFMAEEFTIQAALYTHHQYIAGFLMMGAFAHGAIFFVRDYDPE 86
            AFMA++FT QAALYTHHQYIAGFLM+GAFAHGAIFFVRDYDP+
Sbjct:   19 AFMAKDFTTQAALYTHHQYIAGFLMVGAFAHGAIFFVRDYDPK 61          
BLAST of mRNA_H-paniculata_contig19404.4906.1 vs. uniprot
Match: Q6TNX8_RHOVL (Photosystem I (Fragment) n=2 Tax=Rhodophyta TaxID=2763 RepID=Q6TNX8_RHOVL)

HSP 1 Score: 85.9 bits (211), Expect = 9.500e-18
Identity = 39/44 (88.64%), Postives = 43/44 (97.73%), Query Frame = 0
Query:   44 AFMAEEFTIQAALYTHHQYIAGFLMMGAFAHGAIFFVRDYDPEK 87
            AFMA++FT QAALYTHHQYIAGFLM+GAFAHGAIFFVRDYDPE+
Sbjct:  193 AFMAQDFTTQAALYTHHQYIAGFLMVGAFAHGAIFFVRDYDPEQ 236          
BLAST of mRNA_H-paniculata_contig19404.4906.1 vs. uniprot
Match: A0A1G4NSP4_9FLOR (Photosystem I P700 chlorophyll a apoprotein A2 n=2 Tax=Dichotomaria marginata TaxID=268567 RepID=A0A1G4NSP4_9FLOR)

HSP 1 Score: 85.9 bits (211), Expect = 1.260e-17
Identity = 39/44 (88.64%), Postives = 43/44 (97.73%), Query Frame = 0
Query:   44 AFMAEEFTIQAALYTHHQYIAGFLMMGAFAHGAIFFVRDYDPEK 87
            AFMA++FT QAALYTHHQYIAGFLM+GAFAHGAIFFVRDYDP+K
Sbjct:  359 AFMAKDFTTQAALYTHHQYIAGFLMVGAFAHGAIFFVRDYDPQK 402          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig19404.4906.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0H5B939_9PHAE5.240e-1990.70Photosystem I P700 apoprotein A2 (Fragment) n=1 Ta... [more]
A0A2H5PG69_CITUN3.060e-1879.55Uncharacterized protein n=1 Tax=Citrus unshiu TaxI... [more]
A0A830DGM8_9LAMI3.400e-1879.55Photosystem i p700 chlorophyll a apoprotein a2 n=1... [more]
A0A7T7DA50_9STRA3.530e-1890.70Photosystem I (Fragment) n=2 Tax=Phaeosacciales Ta... [more]
A0A2L1DF55_9FLOR4.190e-1886.36PSI P700 apoprotein A2 (Fragment) n=1 Tax=Atractop... [more]
A0A7T7IGN1_9STRA6.100e-1890.70PsaB (Fragment) n=1 Tax=Phaeothamnion wetherbeei T... [more]
A0A0A7M1C6_9STRA7.990e-1878.00Photosystem I P700 apoprotein A2 (Fragment) n=1 Ta... [more]
A0A7T7IGN4_9STRA8.000e-1888.37PsaB (Fragment) n=2 Tax=Ochrophyta TaxID=2696291 R... [more]
Q6TNX8_RHOVL9.500e-1888.64Photosystem I (Fragment) n=2 Tax=Rhodophyta TaxID=... [more]
A0A1G4NSP4_9FLOR1.260e-1788.64Photosystem I P700 chlorophyll a apoprotein A2 n=2... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR036408Photosystem I PsaA/PsaB superfamilyGENE3D1.20.1130.10coord: 30..88
e-value: 6.1E-19
score: 69.2
IPR036408Photosystem I PsaA/PsaB superfamilySUPERFAMILY81558Photosystem I subunits PsaA/PsaBcoord: 44..86
IPR001280Photosystem I PsaA/PsaBPFAMPF00223PsaA_PsaBcoord: 37..87
e-value: 4.5E-19
score: 68.1
IPR013823Ribosomal protein L7/L12, C-terminalPFAMPF00542Ribosomal_L12coord: 1..44
e-value: 6.5E-15
score: 55.2
NoneNo IPR availablePANTHERPTHR30128OUTER MEMBRANE PROTEIN, OMPA-RELATEDcoord: 36..87
NoneNo IPR availablePANTHERPTHR30128:SF4coord: 36..87
NoneNo IPR availablePHOBIUSCYTOPLASMIC_DOMAINCytoplasmic domaincoord: 81..88
NoneNo IPR availablePHOBIUSTRANSMEMBRANETransmembrane regioncoord: 62..80
NoneNo IPR availablePHOBIUSNON_CYTOPLASMIC_DOMAINNon cytoplasmic domaincoord: 1..61
NoneNo IPR availablePRODOMPD001326coord: 1..44
e-value: 7.0E-10
score: 147.0
NoneNo IPR availableTMHMMTMhelixcoord: 62..80
IPR014719Ribosomal protein L7/L12, C-terminal/adaptor protein ClpS-likeSUPERFAMILY54736ClpS-likecoord: 1..45

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig19404contigH-paniculata_contig19404:629..895 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig19404.4906.1mRNA_H-paniculata_contig19404.4906.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig19404 629..895 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig19404.4906.1 ID=prot_H-paniculata_contig19404.4906.1|Name=mRNA_H-paniculata_contig19404.4906.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=89bp
VRSVTEFGLKEAKEVVENTPRVLKEGLSKAAAEEAKMFLEEAGAFMAEEF
TIQAALYTHHQYIAGFLMMGAFAHGAIFFVRDYDPEKK*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR036408PSI_PsaA/B_sf
IPR001280PSI_PsaA/B
IPR013823Ribosomal_L7/L12_C
IPR014719Ribosomal_L7/12_C/ClpS-like