mRNA_H-paniculata_contig19384.4898.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig19384.4898.1 vs. uniprot
Match: D8LCB5_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCB5_ECTSI) HSP 1 Score: 389 bits (999), Expect = 3.460e-133 Identity = 183/221 (82.81%), Postives = 205/221 (92.76%), Query Frame = 1
Query: 1 GPRPAVTTFQQLNAPPVVPEGFEGWNEVMDTWGNKMIGALEVVARLCAIGLGLEADAITSLMHEGPHLLAPTGSDFNKYDSLGTVLAGFHYDLNLLTIHGKSRFPGLSVWLRDGRRRQVSVPDGCLLVQAGKQLERLTGGHVLAGFHEVAVSEATVETIGKRRQEGASLWRISSTCFGHVASDKVLRPLGSFATEEALANYPPISAGDMVQEELRAINLAA 663
GPRPAVT +QQLN PPVVPEGFE W+ +MD WGNKMIGALE V+RLCAIGLGL+ +AI++LMHEGPHLLAPTGS+F+K+DS GTVLAG+HYD NLLTIHGKSR+PGLSVWLRDGR+ VSVPDGCLLVQAGKQLERLTGGHVLAGFHEVAVS+AT+ET+ KR+QEG SLWRISSTCFGHVASD+VLRPLG FATEEALA YP I+AGDM+QEEL+AINLAA
Sbjct: 123 GPRPAVTKYQQLNPPPVVPEGFENWSTIMDAWGNKMIGALETVSRLCAIGLGLDEEAISTLMHEGPHLLAPTGSNFDKFDSAGTVLAGYHYDFNLLTIHGKSRYPGLSVWLRDGRKMPVSVPDGCLLVQAGKQLERLTGGHVLAGFHEVAVSQATIETMRKRKQEGQSLWRISSTCFGHVASDQVLRPLGKFATEEALAQYPSITAGDMMQEELKAINLAA 343
BLAST of mRNA_H-paniculata_contig19384.4898.1 vs. uniprot
Match: A0A1Y1HUE2_KLENI (2OG-FeII_Oxy domain-containing protein n=1 Tax=Klebsormidium nitens TaxID=105231 RepID=A0A1Y1HUE2_KLENI) HSP 1 Score: 303 bits (776), Expect = 7.300e-99 Identity = 145/219 (66.21%), Postives = 171/219 (78.08%), Query Frame = 1
Query: 1 GPRPAVTTFQQLNAPPVVPEGFEGWNEVMDTWGNKMIGALEVVARLCAIGLGLEADAITSLMHEGPHLLAPTGSDFNKYDSLGTVLAGFHYDLNLLTIHGKSRFPGLSVWLRDGRRRQVSVPDGCLLVQAGKQLERLTGGHVLAGFHEVAVSEATVETIGKRRQEGASLWRISSTCFGHVASDKVLRPLGSFATEEALANYPPISAGDMVQEELRAINL 657
GPRP T FQ+LNA PV+P GF W +VM+TWG KMI A+EVVA + AIG GLE DAIT+LMH+GPHLLAPTGSD ++Y GTV AG+HYDLN++TIHGKSRFPGL +WLRDG R V VPDGCLL+QAGKQLE LTGG AG HEVAVSE T++ + + R+EG SLWR+SST FGH+ASD L+PLG FA YPPI+AG+ V+ EL AINL
Sbjct: 138 GPRPGKTRFQELNAEPVIPPGFPEWADVMNTWGRKMIAAVEVVAEMLAIGFGLERDAITNLMHQGPHLLAPTGSDLSRYGK-GTVFAGYHYDLNVMTIHGKSRFPGLFIWLRDGTRVPVKVPDGCLLLQAGKQLEWLTGGECKAGMHEVAVSEQTLQAVERARREGRSLWRVSSTVFGHIASDANLQPLGHFADSPTAHLYPPIAAGEFVEAELSAINL 355
BLAST of mRNA_H-paniculata_contig19384.4898.1 vs. uniprot
Match: A0A0A9IS10_ARUDO (Uncharacterized protein n=1 Tax=Arundo donax TaxID=35708 RepID=A0A0A9IS10_ARUDO) HSP 1 Score: 292 bits (748), Expect = 2.290e-96 Identity = 135/219 (61.64%), Postives = 167/219 (76.26%), Query Frame = 1
Query: 1 GPRPAVTTFQQLNAPPVVPEGFEGWNEVMDTWGNKMIGALEVVARLCAIGLGLEADAITSLMHEGPHLLAPTGSDFNKYDSLGTVLAGFHYDLNLLTIHGKSRFPGLSVWLRDGRRRQVSVPDGCLLVQAGKQLERLTGGHVLAGFHEVAVSEATVETIGKRRQEGASLWRISSTCFGHVASDKVLRPLGSFATEEALANYPPISAGDMVQEELRAINL 657
GPRP T F++LN+ PV+PEG W E MD+WG+KMI A+EVVA + A+G GL DA TSLM EGPHLLAPTGSD ++ S GTV AGFHYDLN LTIHG+SRFPGL++WLR+G++ +V VP GCLL+Q+GKQLE LTGG LAG HEV V++ T+E I +++ SLWR+SST F H+ASD VL+PLG FA +YPPI AGD V++EL INL
Sbjct: 31 GPRPVNTRFKELNSEPVIPEGLPEWKETMDSWGSKMISAIEVVAEMAAVGFGLPKDAFTSLMKEGPHLLAPTGSDLQRHGSEGTVFAGFHYDLNFLTIHGRSRFPGLNIWLRNGKKMEVKVPVGCLLIQSGKQLEWLTGGECLAGMHEVVVTKRTLEAIALGKEQNRSLWRVSSTLFAHIASDAVLKPLGHFAETPNAHSYPPICAGDYVEQELSVINL 249
BLAST of mRNA_H-paniculata_contig19384.4898.1 vs. uniprot
Match: A0A804JJZ2_MUSAM ((wild Malaysian banana) hypothetical protein n=1 Tax=Musa acuminata subsp. malaccensis TaxID=214687 RepID=A0A804JJZ2_MUSAM) HSP 1 Score: 295 bits (756), Expect = 4.980e-96 Identity = 135/219 (61.64%), Postives = 167/219 (76.26%), Query Frame = 1
Query: 1 GPRPAVTTFQQLNAPPVVPEGFEGWNEVMDTWGNKMIGALEVVARLCAIGLGLEADAITSLMHEGPHLLAPTGSDFNKYDSLGTVLAGFHYDLNLLTIHGKSRFPGLSVWLRDGRRRQVSVPDGCLLVQAGKQLERLTGGHVLAGFHEVAVSEATVETIGKRRQEGASLWRISSTCFGHVASDKVLRPLGSFATEEALANYPPISAGDMVQEELRAINL 657
GPRPA T FQ+LN+ PV+PEGF W E MD+WG+KMI A+EVVA + AIG GL+ DA TSLM +GPHLLAPTGSD ++ SLGTV AG+HYDLN LTIHG+SRFPGLS+WLR+G++ +V VP GCLL+Q G Q+E LTGG LAG HEV V+ T+E I +Q+ S+WR+SST F H+ASD +L+PLG FA + YPP+ AGD V+ EL INL
Sbjct: 139 GPRPANTRFQELNSEPVIPEGFPEWKETMDSWGSKMIAAIEVVAEMAAIGFGLDKDAFTSLMKQGPHLLAPTGSDLQRHGSLGTVFAGYHYDLNFLTIHGRSRFPGLSIWLRNGQKMEVKVPVGCLLIQTGMQIEWLTGGKCLAGMHEVTVTNRTLEAIELAKQQNLSIWRVSSTLFAHIASDAILKPLGHFAETPVASKYPPMCAGDFVERELGVINL 357
BLAST of mRNA_H-paniculata_contig19384.4898.1 vs. uniprot
Match: W2XKW3_PHYPR (2OG-FeII_Oxy domain-containing protein n=1 Tax=Phytophthora parasitica CJ01A1 TaxID=1317063 RepID=W2XKW3_PHYPR) HSP 1 Score: 291 bits (744), Expect = 5.970e-96 Identity = 138/219 (63.01%), Postives = 168/219 (76.71%), Query Frame = 1
Query: 1 GPRPAVTTFQQLNAPPVVPEGFEGWNEVMDTWGNKMIGALEVVARLCAIGLGLEADAITSLMHEGPHLLAPTGSDFNKYDSLGTVLAGFHYDLNLLTIHGKSRFPGLSVWLRDGRRRQVSVPDGCLLVQAGKQLERLTGGHVLAGFHEVAVSEATVETIGKRRQEGASLWRISSTCFGHVASDKVLRPLGSFATEEALANYPPISAGDMVQEELRAINL 657
G RPA T F++LNA PVVP+ F W VM+ WG KM+ A+ + + A+GLGLE DA+ + GPHLLAPTGS+FN ++ L VLA +HYDLNLLTIHGKSRFPGL +WLRDG R V +PDGCLLVQAGKQ+E LTGG+V AGFHEV V+E+T++TI +R++EG SLWR+SST F H ASDK L PLG FAT +ALA YPPI AG+ V EEL I+L
Sbjct: 15 GERPADTKFEELNAEPVVPKKFPEWESVMNMWGGKMLDAITDLVEIVALGLGLEKDALVDRIKYGPHLLAPTGSNFNVFNQLNDVLAAYHYDLNLLTIHGKSRFPGLYIWLRDGTRTAVKIPDGCLLVQAGKQMEYLTGGYVQAGFHEVVVAESTLDTIAQRKKEGKSLWRVSSTLFSHTASDKTLVPLGPFATPDALAKYPPILAGNQVLEELSQIDL 233
BLAST of mRNA_H-paniculata_contig19384.4898.1 vs. uniprot
Match: A0A2G5DYF8_AQUCA (Uncharacterized protein n=2 Tax=Thalictroideae TaxID=1463137 RepID=A0A2G5DYF8_AQUCA) HSP 1 Score: 295 bits (755), Expect = 6.830e-96 Identity = 134/219 (61.19%), Postives = 166/219 (75.80%), Query Frame = 1
Query: 1 GPRPAVTTFQQLNAPPVVPEGFEGWNEVMDTWGNKMIGALEVVARLCAIGLGLEADAITSLMHEGPHLLAPTGSDFNKYDSLGTVLAGFHYDLNLLTIHGKSRFPGLSVWLRDGRRRQVSVPDGCLLVQAGKQLERLTGGHVLAGFHEVAVSEATVETIGKRRQEGASLWRISSTCFGHVASDKVLRPLGSFATEEALANYPPISAGDMVQEELRAINL 657
GPRP+ T FQ+LN+ PVVPEGF W E MD+WG KM+ A+E VA + AIG GLE DA TSLM +GPHLLAPTGS+ +Y LGTV AG+HYDLN LTIHG+SRFPGL++WLR+G++ +V VP GCLL+Q GKQLE LT G LAG HEV V+ T++ I +Q+ SLWR+SST F H+ASD +L+PLG FA ANYPP+ AG+ V++EL INL
Sbjct: 140 GPRPSNTRFQELNSEPVVPEGFPEWKETMDSWGYKMVSAIEAVAEMAAIGFGLERDAFTSLMQKGPHLLAPTGSNLQRYGQLGTVFAGYHYDLNFLTIHGRSRFPGLNIWLRNGQKVEVKVPVGCLLIQTGKQLEWLTAGECLAGMHEVVVTNRTIDAIESAKQQSRSLWRVSSTLFAHIASDSILKPLGHFAESPLAANYPPMCAGEFVEQELAVINL 358
BLAST of mRNA_H-paniculata_contig19384.4898.1 vs. uniprot
Match: A0A833QX35_9POAL (Uncharacterized protein n=1 Tax=Carex littledalei TaxID=544730 RepID=A0A833QX35_9POAL) HSP 1 Score: 296 bits (759), Expect = 8.770e-96 Identity = 141/240 (58.75%), Postives = 174/240 (72.50%), Query Frame = 1
Query: 1 GPRPAVTTFQQLNAPPVVPEGFEGWNEVMDTWGNKMIGALEVVARLCAIGLGLEADAITSLMHEGPHLLAPTGSDFNKYDSLGTVLAGFHYDLNLLTIHGKSRFPGLSVWLRDGRRRQVSVPDGCLLVQAGKQLERLTGGHVLAGFHEVAVSEATVETIGKRRQEGASLWRISSTCFGHVASDKVLRPLGSFATEEALANYPPISAGDMVQEELRAINLAAS*PSGMHLIPPEADISSRP 720
GPRP+ T F++LNA PV+P+GF W E MD WG+KMI A+EVVA + AIG GL DA TSLM+ GPHLLAPTGSD K+ S GTV AGFHYDLN LTIHG+SRFPGL++W+R+G++ +V VP GCLL+Q GKQLE LTGG LAG HEV V+ T+E I + RQE SLWR+SST FGH+ASD +L+PLG F +NYPPI G+ V++EL INL G+ L+ D+ P
Sbjct: 135 GPRPSTTRFKELNAEPVIPDGFPEWKETMDFWGSKMISAIEVVAEMAAIGFGLPKDAFTSLMNLGPHLLAPTGSDLKKHGSEGTVFAGFHYDLNFLTIHGRSRFPGLNIWVRNGQKMEVKVPLGCLLIQTGKQLEWLTGGECLAGMHEVVVTNRTLEVIERARQENRSLWRVSSTLFGHIASDAMLKPLGQFTEAPLASNYPPIYTGEYVEQELSLINL-----KGVQLLSNFGDLIGEP 369
BLAST of mRNA_H-paniculata_contig19384.4898.1 vs. uniprot
Match: A0A1B6Q2Z9_SORBI (Uncharacterized protein n=3 Tax=Sorghum bicolor TaxID=4558 RepID=A0A1B6Q2Z9_SORBI) HSP 1 Score: 294 bits (753), Expect = 1.170e-95 Identity = 136/219 (62.10%), Postives = 168/219 (76.71%), Query Frame = 1
Query: 1 GPRPAVTTFQQLNAPPVVPEGFEGWNEVMDTWGNKMIGALEVVARLCAIGLGLEADAITSLMHEGPHLLAPTGSDFNKYDSLGTVLAGFHYDLNLLTIHGKSRFPGLSVWLRDGRRRQVSVPDGCLLVQAGKQLERLTGGHVLAGFHEVAVSEATVETIGKRRQEGASLWRISSTCFGHVASDKVLRPLGSFATEEALANYPPISAGDMVQEELRAINL 657
GPRPA T F++LN+ PV+PEG W E MD+WG+KMI A+EVVA + AIG GL DA TSLM EGPHLLAPTGSD ++ S GTV AGFHYDLN LTIHG+SRFPGL++WLR+G++ +V VP GCLL+Q+GKQLE LTGG LAG HEV VS+ T++ I +++ SLWR+SST F H+ASD +L+PLG FA +YPPI AGD V++EL INL
Sbjct: 134 GPRPANTRFKELNSEPVIPEGLPEWKETMDSWGSKMISAIEVVAEMAAIGFGLSKDAFTSLMKEGPHLLAPTGSDLQRHGSEGTVFAGFHYDLNFLTIHGRSRFPGLNIWLRNGKKMEVKVPVGCLLIQSGKQLEWLTGGDCLAGMHEVVVSKRTLDAIALAKEQNRSLWRVSSTLFAHIASDAILKPLGHFAEAPDAHSYPPICAGDYVEQELSVINL 352
BLAST of mRNA_H-paniculata_contig19384.4898.1 vs. uniprot
Match: UPI001CB8DFF4 (uncharacterized protein LOC122581816 n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB8DFF4) HSP 1 Score: 294 bits (752), Expect = 1.370e-95 Identity = 136/222 (61.26%), Postives = 166/222 (74.77%), Query Frame = 1
Query: 1 GPRPAVTTFQQLNAPPVVPEGFEGWNEVMDTWGNKMIGALEVVARLCAIGLGLEADAITSLMHEGPHLLAPTGSDFNKYDSLGTVLAGFHYDLNLLTIHGKSRFPGLSVWLRDGRRRQVSVPDGCLLVQAGKQLERLTGGHVLAGFHEVAVSEATVETIGKRRQEGASLWRISSTCFGHVASDKVLRPLGSFATEEALANYPPISAGDMVQEELRAINLAAS 666
GPRP+ T FQ+LN+ PV+PEGF W E MDTWG+KMI A+EVVA + AIG GL DA T LM +GPHLLAPTGS+ ++ GTV AG+HYDLN LTIHG+SRFPGLS+WLR+G++ +V VP GCLL+Q GKQ+E LT G +AG HEV VS+ T++ I K QE SLWR+SST F H+ASD VL+PLG FA YPPI AG+ V++EL AINL S
Sbjct: 127 GPRPSTTRFQELNSEPVIPEGFPEWKETMDTWGSKMISAIEVVAEMAAIGFGLSKDAFTGLMKQGPHLLAPTGSNLQRHGKEGTVFAGYHYDLNFLTIHGRSRFPGLSIWLRNGKKVEVKVPVGCLLIQTGKQIEWLTAGDCIAGMHEVVVSKRTIDAINKASQENRSLWRVSSTLFSHIASDAVLKPLGHFAQLPLADKYPPICAGEYVEQELSAINLKGS 348
BLAST of mRNA_H-paniculata_contig19384.4898.1 vs. uniprot
Match: A0A1S2YWB9_CICAR (uncharacterized protein LOC101510204 n=4 Tax=IRL clade TaxID=2233839 RepID=A0A1S2YWB9_CICAR) HSP 1 Score: 293 bits (751), Expect = 1.880e-95 Identity = 133/219 (60.73%), Postives = 166/219 (75.80%), Query Frame = 1
Query: 1 GPRPAVTTFQQLNAPPVVPEGFEGWNEVMDTWGNKMIGALEVVARLCAIGLGLEADAITSLMHEGPHLLAPTGSDFNKYDSLGTVLAGFHYDLNLLTIHGKSRFPGLSVWLRDGRRRQVSVPDGCLLVQAGKQLERLTGGHVLAGFHEVAVSEATVETIGKRRQEGASLWRISSTCFGHVASDKVLRPLGSFATEEALANYPPISAGDMVQEELRAINL 657
GPRP++T FQ+LNA PV+PEGF W E MD+WG KMI A+EVVA + AIG GL DA TSLM GPHLLAPTGSD KY+ GT+ AG+HYDLN LTIHG+SRFPGL++WL++G++ QV VP GCLL+Q GKQ+E LTGG +AG HEV + T++ I +++ SLWR+SST F H+ASD VL+PLG FA + YPPISAG+ V++EL INL
Sbjct: 129 GPRPSITRFQELNAEPVIPEGFPEWKETMDSWGYKMIAAIEVVAEMAAIGFGLPKDAFTSLMKLGPHLLAPTGSDLEKYNQEGTIFAGYHYDLNFLTIHGRSRFPGLNIWLKNGQKVQVKVPVGCLLIQTGKQIEWLTGGDCIAGMHEVVATNKTIDAINAAKEQKRSLWRVSSTLFAHIASDAVLKPLGQFAESPQASKYPPISAGEYVEQELAVINL 347 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig19384.4898.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig19384.4898.1 >prot_H-paniculata_contig19384.4898.1 ID=prot_H-paniculata_contig19384.4898.1|Name=mRNA_H-paniculata_contig19384.4898.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=195bp MDTWGNKMIGALEVVARLCAIGLGLEADAITSLMHEGPHLLAPTGSDFNKback to top mRNA from alignment at H-paniculata_contig19384:132..4701- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig19384.4898.1 ID=mRNA_H-paniculata_contig19384.4898.1|Name=mRNA_H-paniculata_contig19384.4898.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4570bp|location=Sequence derived from alignment at H-paniculata_contig19384:132..4701- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig19384:132..4701- >mRNA_H-paniculata_contig19384.4898.1 ID=mRNA_H-paniculata_contig19384.4898.1|Name=mRNA_H-paniculata_contig19384.4898.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1170bp|location=Sequence derived from alignment at H-paniculata_contig19384:132..4701- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |