mRNA_H-paniculata_contig19336.4886.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig19336.4886.1 vs. uniprot
Match: A0A6H5JQ37_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JQ37_9PHAE) HSP 1 Score: 110 bits (275), Expect = 3.360e-26 Identity = 53/95 (55.79%), Postives = 68/95 (71.58%), Query Frame = 1
Query: 1 GMATAIDTLCSQAHGAKQYRVVGATFARGTLVTAFTTFPVVGTLWYYMQDILVVVGQDPNIAKGAGNFSRGYMWGMAAYAIFENLKRCLQVHTLL 285
GM T I+ LC+QA GAK R+VG FARGTL+TAF PV LW+YM++I++ GQ NIA G F+R YM GMA YA++ENLKRCLQ +++
Sbjct: 98 GMGTGIELLCAQAFGAKNNRLVGVAFARGTLLTAFLFIPV-AFLWFYMENIMLAFGQQENIAHVTGTFTRAYMLGMAPYAVYENLKRCLQAQSVV 191
BLAST of mRNA_H-paniculata_contig19336.4886.1 vs. uniprot
Match: A0A368R9E7_SETIT (Protein DETOXIFICATION n=3 Tax=Setaria TaxID=4554 RepID=A0A368R9E7_SETIT) HSP 1 Score: 79.7 bits (195), Expect = 2.390e-15 Identity = 41/95 (43.16%), Postives = 60/95 (63.16%), Query Frame = 1
Query: 1 GMATAIDTLCSQAHGAKQYRVVGATFARGTLVTAFTTFPVVGTLWYYMQDILVVVGQDPNIAKGAGNFSRGYMWGMAAYAIFENLKRCLQVHTLL 285
GMA+A++TLC QA+GAKQYR VGA R + F P+ LW +M ILV++GQDP I+ GAG + + G+ A A+ + + + LQ +L+
Sbjct: 103 GMASALETLCGQAYGAKQYRKVGADTYRAVVTLLFVCIPL-SLLWVFMDKILVLIGQDPMISHGAGRYLIWLIPGLFASAVIQPVTKFLQSQSLI 196
BLAST of mRNA_H-paniculata_contig19336.4886.1 vs. uniprot
Match: A0A830AYT1_9LAMI (Protein DETOXIFICATION n=1 Tax=Phtheirospermum japonicum TaxID=374723 RepID=A0A830AYT1_9LAMI) HSP 1 Score: 79.3 bits (194), Expect = 3.320e-15 Identity = 36/95 (37.89%), Postives = 60/95 (63.16%), Query Frame = 1
Query: 1 GMATAIDTLCSQAHGAKQYRVVGATFARGTLVTAFTTFPVVGTLWYYMQDILVVVGQDPNIAKGAGNFSRGYMWGMAAYAIFENLKRCLQVHTLL 285
G++ A++TLC Q HGAK YR++G ++T F T +V +W+Y IL+++ QDP IAK AG + + + G+ AY + +N+ R LQ +++
Sbjct: 95 GLSGALETLCGQGHGAKMYRMLGIYLQASCIITIFFTI-IVSVIWWYSDIILILLHQDPRIAKAAGLYLKYLIPGLVAYGVLQNILRFLQTQSVV 188
BLAST of mRNA_H-paniculata_contig19336.4886.1 vs. uniprot
Match: A0A482EW65_REHGL (Protein DETOXIFICATION n=2 Tax=Rehmannia glutinosa TaxID=99300 RepID=A0A482EW65_REHGL) HSP 1 Score: 78.6 bits (192), Expect = 6.010e-15 Identity = 41/95 (43.16%), Postives = 62/95 (65.26%), Query Frame = 1
Query: 1 GMATAIDTLCSQAHGAKQYRVVGATFARGTLVTAFTTFPVVGTLWYYMQDILVVVGQDPNIAKGAGNFSRGYMWGMAAYAIFENLKRCLQVHTLL 285
GM++A++TLC QA+GAKQY+ VG TFA G ++ F V LW Y + IL+ +GQDP+I+ AG ++ + + YAI ++L R LQ +L+
Sbjct: 85 GMSSALETLCGQAYGAKQYQRVG-TFAYGAILCLFLVCIPVSLLWIYTEKILIFMGQDPSISAAAGKYAILLIPTLFPYAILQSLVRYLQTQSLI 178
BLAST of mRNA_H-paniculata_contig19336.4886.1 vs. uniprot
Match: A0A2R6P9T7_ACTCC (Protein DETOXIFICATION n=2 Tax=Actinidia TaxID=3624 RepID=A0A2R6P9T7_ACTCC) HSP 1 Score: 78.6 bits (192), Expect = 6.060e-15 Identity = 40/95 (42.11%), Postives = 57/95 (60.00%), Query Frame = 1
Query: 1 GMATAIDTLCSQAHGAKQYRVVGATFARGTLVTAFTTFPVVGTLWYYMQDILVVVGQDPNIAKGAGNFSRGYMWGMAAYAIFENLKRCLQVHTLL 285
GM +A++TLC QA+GAKQY ++G R L TT P+ LW+Y IL GQ+P I+ AGNF+R + + AYA+ + L R LQ ++
Sbjct: 94 GMGSALETLCGQAYGAKQYHMLGIHTQRAMLTLLATTVPL-SLLWFYTTTILTAFGQNPEISTQAGNFNRWMIPSLFAYALLQCLNRFLQTQNIV 187
BLAST of mRNA_H-paniculata_contig19336.4886.1 vs. uniprot
Match: A0A6P6V9G9_COFAR (Protein DETOXIFICATION n=6 Tax=Coffea TaxID=13442 RepID=A0A6P6V9G9_COFAR) HSP 1 Score: 78.2 bits (191), Expect = 8.260e-15 Identity = 38/95 (40.00%), Postives = 60/95 (63.16%), Query Frame = 1
Query: 1 GMATAIDTLCSQAHGAKQYRVVGATFARGTLVTAFTTFPVVGTLWYYMQDILVVVGQDPNIAKGAGNFSRGYMWGMAAYAIFENLKRCLQVHTLL 285
GM +A++TLC QA+GAKQYR++G RG +V + + +W+Y IL+V+GQD I+ AG F+R + G+ AYA+ + + R LQ ++
Sbjct: 96 GMGSALETLCGQAYGAKQYRMLGIYTQRGMIVLLVLSI-FLALIWFYTDHILIVLGQDQEISIEAGKFNRSMIPGLFAYALLQCINRFLQTQNIV 189
BLAST of mRNA_H-paniculata_contig19336.4886.1 vs. uniprot
Match: UPI0005CA5825 (MATE efflux family protein DTX1-like n=1 Tax=Fragaria vesca subsp. vesca TaxID=101020 RepID=UPI0005CA5825) HSP 1 Score: 78.2 bits (191), Expect = 8.380e-15 Identity = 38/90 (42.22%), Postives = 57/90 (63.33%), Query Frame = 1
Query: 1 GMATAIDTLCSQAHGAKQYRVVGATFARGTLVTAFTTFPVVGTLWYYMQDILVVVGQDPNIAKGAGNFSRGYMWGMAAYAIFENLKRCLQ 270
GMA+A++TLC QA+GAKQY ++G RG L + P+ +W+Y IL+ +GQD I+K AG F+R + + AY++ + L R LQ
Sbjct: 127 GMASALETLCGQAYGAKQYHMLGVHMQRGMLTLVVVSMPL-ALIWFYTGTILIALGQDHEISKEAGTFNRWMIPSLFAYSLLQCLNRFLQ 215
BLAST of mRNA_H-paniculata_contig19336.4886.1 vs. uniprot
Match: A0A7N0UX74_KALFE (Protein DETOXIFICATION n=2 Tax=Kalanchoe fedtschenkoi TaxID=63787 RepID=A0A7N0UX74_KALFE) HSP 1 Score: 77.8 bits (190), Expect = 1.130e-14 Identity = 38/95 (40.00%), Postives = 60/95 (63.16%), Query Frame = 1
Query: 1 GMATAIDTLCSQAHGAKQYRVVGATFARGTLVTAFTTFPVVGTLWYYMQDILVVVGQDPNIAKGAGNFSRGYMWGMAAYAIFENLKRCLQVHTLL 285
GMA+A+DTLC Q++GAKQY ++G + L+ P+ G +W + ILV+VGQDP I+K AG++ + + G+ AY + + L R LQ ++
Sbjct: 101 GMASALDTLCGQSYGAKQYHMLGIQMQKAMLILTVVGVPIAG-MWAKTEQILVLVGQDPQISKVAGHYIQFLIPGLFAYGLLQCLVRFLQTQNIV 194
BLAST of mRNA_H-paniculata_contig19336.4886.1 vs. uniprot
Match: M1ANX6_SOLTU (TRANSPARENT TESTA 12 protein n=1 Tax=Solanum tuberosum TaxID=4113 RepID=M1ANX6_SOLTU) HSP 1 Score: 75.9 bits (185), Expect = 1.730e-14 Identity = 38/95 (40.00%), Postives = 61/95 (64.21%), Query Frame = 1
Query: 1 GMATAIDTLCSQAHGAKQYRVVGATFARGTLVTAFTTFPVVGTLWYYMQDILVVVGQDPNIAKGAGNFSRGYMWGMAAYAIFENLKRCLQVHTLL 285
GM++A++TLC QA+GA+QYR VG TF+ ++ F V LW + +L+++GQDP+IA AG ++ + + YAI ++L R LQ +L+
Sbjct: 83 GMSSALETLCGQAYGARQYRKVG-TFSYSAIICLFLVCIPVSVLWIFTDKLLILMGQDPSIATEAGKYAIWLIPTLFPYAILQSLVRYLQAQSLI 176
BLAST of mRNA_H-paniculata_contig19336.4886.1 vs. uniprot
Match: A0A7I4AMZ3_PHYPA (Uncharacterized protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A7I4AMZ3_PHYPA) HSP 1 Score: 77.0 bits (188), Expect = 1.760e-14 Identity = 38/95 (40.00%), Postives = 59/95 (62.11%), Query Frame = 1
Query: 1 GMATAIDTLCSQAHGAKQYRVVGATFARGTLVTAFTTFPVVGTLWYYMQDILVVVGQDPNIAKGAGNFSRGYMWGMAAYAIFENLKRCLQVHTLL 285
GM A++TLC Q+ GAK Y++VG RG +V T PV +W+ M +IL+ +GQDP IA+ +G ++R + + AYA + L + LQ +L+
Sbjct: 112 GMGCALETLCGQSFGAKNYQMVGIYLQRGIIVLFLTAIPV-AAIWWNMTNILIALGQDPEIAEKSGEYARFLIPSLFAYAAIQPLVKFLQAQSLV 205 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig19336.4886.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig19336.4886.1 >prot_H-paniculata_contig19336.4886.1 ID=prot_H-paniculata_contig19336.4886.1|Name=mRNA_H-paniculata_contig19336.4886.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=96bp MATAIDTLCSQAHGAKQYRVVGATFARGTLVTAFTTFPVVGTLWYYMQDIback to top mRNA from alignment at H-paniculata_contig19336:3988..4712- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig19336.4886.1 ID=mRNA_H-paniculata_contig19336.4886.1|Name=mRNA_H-paniculata_contig19336.4886.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=725bp|location=Sequence derived from alignment at H-paniculata_contig19336:3988..4712- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig19336:3988..4712- >mRNA_H-paniculata_contig19336.4886.1 ID=mRNA_H-paniculata_contig19336.4886.1|Name=mRNA_H-paniculata_contig19336.4886.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=576bp|location=Sequence derived from alignment at H-paniculata_contig19336:3988..4712- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |