mRNA_H-paniculata_contig19322.4882.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig19322.4882.1 vs. uniprot
Match: A0A6H5L0D3_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0D3_9PHAE) HSP 1 Score: 113 bits (283), Expect = 1.110e-27 Identity = 59/68 (86.76%), Postives = 61/68 (89.71%), Query Frame = 1
Query: 1 FPELSSKPYDLIVLGSGPGGEATAVQAARLGATVGVVEIKKSFGGPTGLTSKAVREAAKQINAAVKNV 204
FP L KPYDL+VLGSGPGGEA AVQAARLGA+V VVEIKKSFGGPTGLTSKAVREAAKQIN AV NV
Sbjct: 60 FPPLPDKPYDLVVLGSGPGGEAAAVQAARLGASVAVVEIKKSFGGPTGLTSKAVREAAKQINQAVTNV 127
BLAST of mRNA_H-paniculata_contig19322.4882.1 vs. uniprot
Match: A0A836CAQ8_9STRA (Pyr_redox_2 domain-containing protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAQ8_9STRA) HSP 1 Score: 90.1 bits (222), Expect = 4.990e-22 Identity = 47/68 (69.12%), Postives = 54/68 (79.41%), Query Frame = 1
Query: 1 FPELSSKPYDLIVLGSGPGGEATAVQAARLGATVGVVEIKKSFGGPTGLTSKAVREAAKQINAAVKNV 204
FP++ YDL+VLGSGPGGEA A +AA+L A V VVEIK++FGGPTGLTSKAVREA KQI AV V
Sbjct: 12 FPDVPEDGYDLVVLGSGPGGEAIATRAAQLSARVAVVEIKRAFGGPTGLTSKAVREATKQIVQAVDQV 79
BLAST of mRNA_H-paniculata_contig19322.4882.1 vs. uniprot
Match: W7T4Z3_9STRA (Soluble pyridine nucleotide transhydrogenase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T4Z3_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 1.620e-18 Identity = 47/74 (63.51%), Postives = 55/74 (74.32%), Query Frame = 1
Query: 1 FPELSSK-PYDLIVLGSGPGGEATAVQAARLGATVGVVEIKKSFGGPTGLTSKAVREAAKQINAAVKNVSEGGG 219
FPE PYDLIVLGSGP GE +AA+LG V ++EIKK+FGGPTGLTSKAVREAAK+I +K V + GG
Sbjct: 92 FPEKEDDTPYDLIVLGSGPAGETAGCKAAQLGQKVAIIEIKKAFGGPTGLTSKAVREAAKRI---LKTVDQVGG 162
BLAST of mRNA_H-paniculata_contig19322.4882.1 vs. uniprot
Match: A0A7S1NVB4_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1NVB4_9EUGL) HSP 1 Score: 85.5 bits (210), Expect = 3.470e-18 Identity = 42/63 (66.67%), Postives = 54/63 (85.71%), Query Frame = 1
Query: 1 FPELSSKPYDLIVLGSGPGGEATAVQAARLGATVGVVEIKKSFGGPTGLTSKAVREAAKQINA 189
FP+ + YDL+V+G+GPGGEATAV A+R GA V ++E +++FGGPTGLTSKAVREAAKQI+A
Sbjct: 180 FPKAEGE-YDLVVVGAGPGGEATAVAASRFGARVAIIESRRAFGGPTGLTSKAVREAAKQISA 241
BLAST of mRNA_H-paniculata_contig19322.4882.1 vs. uniprot
Match: A0A7S2Y1R6_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2Y1R6_9STRA) HSP 1 Score: 85.5 bits (210), Expect = 8.900e-18 Identity = 45/68 (66.18%), Postives = 54/68 (79.41%), Query Frame = 1
Query: 1 FPELSSKPYDLIVLGSGPGGEATAVQAARLGATVGVVEIKKSFGGPTGLTSKAVREAAKQINAAVKNV 204
FPE +PYDL+V+G GPGGEA AV AA+LGA+V ++E K SFGGPTGLTSKAVREA K+I A+ V
Sbjct: 52 FPERY-EPYDLLVIGCGPGGEAAAVNAAKLGASVALIEKKSSFGGPTGLTSKAVREATKRICKAIDQV 118
BLAST of mRNA_H-paniculata_contig19322.4882.1 vs. uniprot
Match: A0A6U8N6N8_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A6U8N6N8_9EUGL) HSP 1 Score: 85.5 bits (210), Expect = 8.990e-18 Identity = 42/63 (66.67%), Postives = 54/63 (85.71%), Query Frame = 1
Query: 1 FPELSSKPYDLIVLGSGPGGEATAVQAARLGATVGVVEIKKSFGGPTGLTSKAVREAAKQINA 189
FP+ + YDL+V+G+GPGGEATAV A+R GA V ++E +++FGGPTGLTSKAVREAAKQI+A
Sbjct: 180 FPKAEGE-YDLVVVGAGPGGEATAVAASRFGARVAIIESRRAFGGPTGLTSKAVREAAKQISA 241
BLAST of mRNA_H-paniculata_contig19322.4882.1 vs. uniprot
Match: K8YWP5_NANGC (Soluble pyridine nucleotide transhydrogenase (Fragment) n=1 Tax=Nannochloropsis gaditana (strain CCMP526) TaxID=1093141 RepID=K8YWP5_NANGC) HSP 1 Score: 84.7 bits (208), Expect = 1.260e-17 Identity = 47/74 (63.51%), Postives = 55/74 (74.32%), Query Frame = 1
Query: 1 FPELSSK-PYDLIVLGSGPGGEATAVQAARLGATVGVVEIKKSFGGPTGLTSKAVREAAKQINAAVKNVSEGGG 219
FPE PYDLIVLGSGP GE +AA+LG V ++EIKK+FGGPTGLTSKAVREAAK+I +K V + GG
Sbjct: 73 FPEKEDDTPYDLIVLGSGPAGETAGCKAAQLGQKVAIIEIKKAFGGPTGLTSKAVREAAKRI---LKTVDQVGG 143
BLAST of mRNA_H-paniculata_contig19322.4882.1 vs. uniprot
Match: A0A4D9CSA5_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CSA5_9STRA) HSP 1 Score: 84.7 bits (208), Expect = 1.670e-17 Identity = 47/74 (63.51%), Postives = 55/74 (74.32%), Query Frame = 1
Query: 1 FPELSSK-PYDLIVLGSGPGGEATAVQAARLGATVGVVEIKKSFGGPTGLTSKAVREAAKQINAAVKNVSEGGG 219
FPE PYDLIVLGSGP GE +AA+LG V ++EIKK+FGGPTGLTSKAVREAAK+I +K V + GG
Sbjct: 92 FPEKEDDTPYDLIVLGSGPAGETAGCKAAQLGQKVAIIEIKKAFGGPTGLTSKAVREAAKRI---LKTVDQVGG 162
BLAST of mRNA_H-paniculata_contig19322.4882.1 vs. uniprot
Match: A0A7R9U251_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U251_9STRA) HSP 1 Score: 82.4 bits (202), Expect = 1.060e-16 Identity = 46/78 (58.97%), Postives = 56/78 (71.79%), Query Frame = 1
Query: 1 FPELSSK----------PYDLIVLGSGPGGEATAVQAARLGATVGVVEIKKSFGGPTGLTSKAVREAAKQINAAVKNV 204
P+LS K P+DL+V+GSGPGGEA A +AA LGA V VVE K +FGGPTGLTSKAVREAA++I AV+ +
Sbjct: 73 LPDLSQKDFPPVPPDDEPFDLVVVGSGPGGEAAAARAAALGAKVAVVERKAAFGGPTGLTSKAVREAAERIAKAVEQL 150
BLAST of mRNA_H-paniculata_contig19322.4882.1 vs. uniprot
Match: A0A7S1TRI9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TRI9_9STRA) HSP 1 Score: 55.1 bits (131), Expect = 7.030e-8 Identity = 29/54 (53.70%), Postives = 37/54 (68.52%), Query Frame = 1
Query: 1 FPELSSK----------PYDLIVLGSGPGGEATAVQAARLGATVGVVEIKKSFG 132
P+LS K PYDL+V+GSGPGGEA A +AA+LGA V VV+ K++FG
Sbjct: 74 LPDLSQKDFPPVPPDDEPYDLVVIGSGPGGEAAATRAAQLGARVAVVDRKRAFG 127 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig19322.4882.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig19322.4882.1 >prot_H-paniculata_contig19322.4882.1 ID=prot_H-paniculata_contig19322.4882.1|Name=mRNA_H-paniculata_contig19322.4882.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=73bp FPELSSKPYDLIVLGSGPGGEATAVQAARLGATVGVVEIKKSFGGPTGLTback to top mRNA from alignment at H-paniculata_contig19322:4606..4824+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig19322.4882.1 ID=mRNA_H-paniculata_contig19322.4882.1|Name=mRNA_H-paniculata_contig19322.4882.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=219bp|location=Sequence derived from alignment at H-paniculata_contig19322:4606..4824+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig19322:4606..4824+ >mRNA_H-paniculata_contig19322.4882.1 ID=mRNA_H-paniculata_contig19322.4882.1|Name=mRNA_H-paniculata_contig19322.4882.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=438bp|location=Sequence derived from alignment at H-paniculata_contig19322:4606..4824+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |