mRNA_H-paniculata_contig19292.4869.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig19292.4869.1 vs. uniprot
Match: D7FIV7_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIV7_ECTSI) HSP 1 Score: 140 bits (352), Expect = 1.510e-36 Identity = 65/93 (69.89%), Postives = 79/93 (84.95%), Query Frame = 1
Query: 1 VAEAVARERGFQVFIHPVIPVLDETRSMVTAYNRVFRRVVNKSKVLRWLDFFDDLLDETGKKLLPEFRLDGTHLAPGYLRLLERALSDTYVDR 279
VAEA++RERG ++F+HPVIPVLDETR MV YNRVFRR+V+KSK L WLDFF+ LLD+TG L P FRLDGTHLA GY+ LLE+AL+D +V+R
Sbjct: 758 VAEALSRERGLRIFVHPVIPVLDETRGMVKTYNRVFRRMVDKSKHLHWLDFFEQLLDDTGSSLRPNFRLDGTHLAAGYVGLLEKALADAWVER 850
BLAST of mRNA_H-paniculata_contig19292.4869.1 vs. uniprot
Match: A0A3F2RPI4_9STRA (Uncharacterized protein n=2 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RPI4_9STRA) HSP 1 Score: 105 bits (261), Expect = 1.210e-24 Identity = 49/83 (59.04%), Postives = 63/83 (75.90%), Query Frame = 1
Query: 13 VARERGFQVFIHPVIPVLDETRSMVTAYNRVFRRVVNKSKVLRWLDFFDDLLDETGKKLLPEFRLDGTHLAPGYLRLLERALS 261
V R+ F+ +IHPV+PVLDETR MV YN++F++ V KS++ +WLDFFDDL+ +T KL PEFRLDGTHL P YL LE L+
Sbjct: 341 VVRKYEFEAYIHPVVPVLDETRGMVVQYNKLFQKRVAKSRICKWLDFFDDLVYQTPYKLRPEFRLDGTHLHPSYLTNLEVELN 423
BLAST of mRNA_H-paniculata_contig19292.4869.1 vs. uniprot
Match: UPI000644823E (hypothetical protein n=1 Tax=Acytostelium subglobosum LB1 TaxID=1410327 RepID=UPI000644823E) HSP 1 Score: 102 bits (255), Expect = 1.890e-23 Identity = 44/86 (51.16%), Postives = 63/86 (73.26%), Query Frame = 1
Query: 28 GFQVFIHPVIPVLDETRSMVTAYNRVFRRVVNKSKVLRWLDFFDDLLDETGKKLLPEFRLDGTHLAPGYLRLLERALSDTYVDRTS 285
++ +IHPV+PVLD+TR+MV A+N++F+ V K K L WLDFFD+LLD TG E+ +DGTH+ P Y+RL+ER ++D Y + S
Sbjct: 699 NYKAYIHPVVPVLDQTRTMVKAFNKIFKEKVMKVKELVWLDFFDELLDSTGNGFNQEYAMDGTHMNPSYVRLVERTINDHYRSKQS 784
BLAST of mRNA_H-paniculata_contig19292.4869.1 vs. uniprot
Match: W2QE94_PHYPN (Uncharacterized protein n=41 Tax=Phytophthora TaxID=4783 RepID=W2QE94_PHYPN) HSP 1 Score: 100 bits (250), Expect = 8.980e-23 Identity = 47/76 (61.84%), Postives = 59/76 (77.63%), Query Frame = 1
Query: 31 FQVFIHPVIPVLDETRSMVTAYNRVFRRVVNKSKVLRWLDFFDDLLDETGKKLLPEFRLDGTHLAPGYLRLLERAL 258
F V+IHPV+PVLDETRS+V +YN++F++ V++S + RWLDF DDL+ KL PEFRLDGTHL P YL LE AL
Sbjct: 749 FDVYIHPVVPVLDETRSLVISYNKLFQKRVDESSISRWLDFHDDLVCGDPPKLRPEFRLDGTHLHPSYLSKLEEAL 824
BLAST of mRNA_H-paniculata_contig19292.4869.1 vs. uniprot
Match: A0A6A3LA10_9STRA (Uncharacterized protein n=6 Tax=Phytophthora TaxID=4783 RepID=A0A6A3LA10_9STRA) HSP 1 Score: 99.8 bits (247), Expect = 2.280e-22 Identity = 45/77 (58.44%), Postives = 60/77 (77.92%), Query Frame = 1
Query: 31 FQVFIHPVIPVLDETRSMVTAYNRVFRRVVNKSKVLRWLDFFDDLLDETGKKLLPEFRLDGTHLAPGYLRLLERALS 261
F+ +IHPV+PVLDETR++V YN++FR+ V KS + +WLDFFDDL+ + KL P+ RLDGTHL P YL LE+AL+
Sbjct: 742 FEAYIHPVVPVLDETRALVIQYNQLFRKQVAKSTICKWLDFFDDLVCDDPPKLRPDLRLDGTHLHPAYLVNLEKALN 818
BLAST of mRNA_H-paniculata_contig19292.4869.1 vs. uniprot
Match: A0A2D4BJE6_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BJE6_PYTIN) HSP 1 Score: 99.0 bits (245), Expect = 4.200e-22 Identity = 44/78 (56.41%), Postives = 58/78 (74.36%), Query Frame = 1
Query: 28 GFQVFIHPVIPVLDETRSMVTAYNRVFRRVVNKSKVLRWLDFFDDLLDETGKKLLPEFRLDGTHLAPGYLRLLERALS 261
GF+VFIHP++PV +ETR +V YN +F+ VNKS RWLDFFDDL++ + +L P + LDGTHL P YL L+ER L+
Sbjct: 607 GFEVFIHPIVPVXNETRPLVIQYNGIFQSRVNKSDKCRWLDFFDDLIEGSPARLRPRYALDGTHLHPSYLALVERELN 684
BLAST of mRNA_H-paniculata_contig19292.4869.1 vs. uniprot
Match: A0A6A4G484_9STRA (Uncharacterized protein n=1 Tax=Phytophthora rubi TaxID=129364 RepID=A0A6A4G484_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 6.980e-22 Identity = 44/77 (57.14%), Postives = 60/77 (77.92%), Query Frame = 1
Query: 31 FQVFIHPVIPVLDETRSMVTAYNRVFRRVVNKSKVLRWLDFFDDLLDETGKKLLPEFRLDGTHLAPGYLRLLERALS 261
F+ +IHPV+PVLDETR++V YN++FR+ V +S + +WLDFFDDL+ + KL P+ RLDGTHL P YL LE+AL+
Sbjct: 459 FEAYIHPVVPVLDETRALVIQYNQLFRKHVAQSTICKWLDFFDDLVCDNPPKLRPDLRLDGTHLHPAYLVNLEKALN 535
BLAST of mRNA_H-paniculata_contig19292.4869.1 vs. uniprot
Match: A0A833TQX5_PHYIN (Uncharacterized protein n=1 Tax=Phytophthora infestans TaxID=4787 RepID=A0A833TQX5_PHYIN) HSP 1 Score: 96.3 bits (238), Expect = 3.040e-21 Identity = 45/85 (52.94%), Postives = 57/85 (67.06%), Query Frame = 1
Query: 13 VARERGFQVFIHPVIPVLDETRSMVTAYNRVFRRVVNKSKVLRWLDFFDDLLDETGKKLLPEFRLDGTHLAPGYLRLLERALSDT 267
V + F V+IHPV+PVLDETR +V YN++F + V KS + +WLDFFD+L+ E KL P FRLDGTH+ P YL L A T
Sbjct: 412 VVEKYAFDVYIHPVVPVLDETRLLVIQYNKLFEKRVVKSSICKWLDFFDELVCEDPPKLRPNFRLDGTHMHPSYLSTLAAAFKRT 496
BLAST of mRNA_H-paniculata_contig19292.4869.1 vs. uniprot
Match: A0A7S2D369_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2D369_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 3.200e-21 Identity = 43/85 (50.59%), Postives = 61/85 (71.76%), Query Frame = 1
Query: 19 RERGFQVFIHPVIPVLDETRSMVTAYNRVFRRVVNKSKVLRWLD-FFDDLLDETGKKLLPEFRLDGTHLAPGYLRLLERALSDTY 270
++RGF++FIHPVIPVL+ETR++V AYN++F+ VN+ + L W+D F LL G KL E+ LDGTHL P Y+ LL L++ +
Sbjct: 54 KQRGFRMFIHPVIPVLNETRNIVKAYNKIFKARVNEVEGLEWIDGVFTRLLTPDGSKLKSEYELDGTHLHPSYVSLLGEGLTEIW 138
BLAST of mRNA_H-paniculata_contig19292.4869.1 vs. uniprot
Match: A0A8K1FF76_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FF76_PYTOL) HSP 1 Score: 95.5 bits (236), Expect = 6.990e-21 Identity = 46/83 (55.42%), Postives = 58/83 (69.88%), Query Frame = 1
Query: 13 VARERGFQVFIHPVIPVLDETRSMVTAYNRVFRRVVNKSKVLRWLDFFDDLLDETGKKLLPEFRLDGTHLAPGYLRLLERALS 261
V + G +VFIHP++PVL ETR +V YN++ R VNKS WLDFFDDLL+ + KL + LDGTHL P YL++LER LS
Sbjct: 755 VVKRFGLEVFIHPIVPVLKETRHLVIQYNQILRDRVNKSNNSTWLDFFDDLLEGSPAKLRSCYELDGTHLHPSYLQVLERELS 837 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig19292.4869.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig19292.4869.1 >prot_H-paniculata_contig19292.4869.1 ID=prot_H-paniculata_contig19292.4869.1|Name=mRNA_H-paniculata_contig19292.4869.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=96bp VAEAVARERGFQVFIHPVIPVLDETRSMVTAYNRVFRRVVNKSKVLRWLDback to top mRNA from alignment at H-paniculata_contig19292:1309..4699- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig19292.4869.1 ID=mRNA_H-paniculata_contig19292.4869.1|Name=mRNA_H-paniculata_contig19292.4869.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3391bp|location=Sequence derived from alignment at H-paniculata_contig19292:1309..4699- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig19292:1309..4699- >mRNA_H-paniculata_contig19292.4869.1 ID=mRNA_H-paniculata_contig19292.4869.1|Name=mRNA_H-paniculata_contig19292.4869.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=576bp|location=Sequence derived from alignment at H-paniculata_contig19292:1309..4699- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |