prot_H-paniculata_contig19165.4811.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig19165.4811.1 vs. uniprot
Match: A0A7D9HG25_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HG25_PARCT) HSP 1 Score: 79.0 bits (193), Expect = 9.020e-15 Identity = 36/77 (46.75%), Postives = 52/77 (67.53%), Query Frame = 0
Query: 10 LAAKHDFELEGMDVDVAYFNAPVEEELFVKLPPAFSPFSRD-ITFVRRLHKSLYGLKQSGRNWSNTLDDFLVGIGLV 85
LAA++D + MDV A+ +AP++ E+F++ P F S + + V RL KSLYGLKQSGRNW+ LD++L+ G V
Sbjct: 243 LAAQYDLTVHQMDVKTAFLHAPIDHEIFMEQPMGFEELSENGVKLVYRLKKSLYGLKQSGRNWNRVLDEYLISDGFV 319
BLAST of mRNA_H-paniculata_contig19165.4811.1 vs. uniprot
Match: A0A0S7FQF2_9TELE (POLX (Fragment) n=1 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7FQF2_9TELE) HSP 1 Score: 75.9 bits (185), Expect = 2.410e-14 Identity = 38/77 (49.35%), Postives = 51/77 (66.23%), Query Frame = 0
Query: 10 LAAKHDFELEGMDVDVAYFNAPVEEELFVKLPPAFSPFSRD-ITFVRRLHKSLYGLKQSGRNWSNTLDDFLVGIGLV 85
LAA++D EL MDV AY +AP++ E+F++ P F + V +L+KSLYGLKQSGRNW+ L DFL+ I V
Sbjct: 10 LAAQYDLELHQMDVKTAYLHAPIDCEIFLEQPEGFEVVTETGEKLVCKLNKSLYGLKQSGRNWNKMLHDFLIEIDFV 86
BLAST of mRNA_H-paniculata_contig19165.4811.1 vs. uniprot
Match: W7TJI6_9STRA (Retrotransposon ty1-copia subclass n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJI6_9STRA) HSP 1 Score: 75.5 bits (184), Expect = 3.570e-14 Identity = 35/76 (46.05%), Postives = 50/76 (65.79%), Query Frame = 0
Query: 7 VFSLAAKHDFELEGMDVDVAYFNAPVEEELFVKLPPAFSPFSRD-ITFVRRLHKSLYGLKQSGRNWSNTLDDFLVG 81
+ +LA D EL+ MDVD AY + +EE+++VK PP + + + + RLHKSLYGLKQSGRNW +D++ G
Sbjct: 112 ILALACILDLELDNMDVDTAYLQSDLEEKIYVKQPPGYEQYGPNGEELLCRLHKSLYGLKQSGRNWHKKIDEWFRG 187
BLAST of mRNA_H-paniculata_contig19165.4811.1 vs. uniprot
Match: A0A0S7FUV3_9TELE (COPIA n=2 Tax=Poeciliopsis prolifica TaxID=188132 RepID=A0A0S7FUV3_9TELE) HSP 1 Score: 75.9 bits (185), Expect = 1.020e-13 Identity = 38/77 (49.35%), Postives = 51/77 (66.23%), Query Frame = 0
Query: 10 LAAKHDFELEGMDVDVAYFNAPVEEELFVKLPPAFSPFSRD-ITFVRRLHKSLYGLKQSGRNWSNTLDDFLVGIGLV 85
LAA++D EL MDV AY +AP++ E+F++ P F + V +L+KSLYGLKQSGRNW+ L DFL+ I V
Sbjct: 10 LAAQYDLELHQMDVKTAYLHAPIDCEIFLEQPEGFEVVTETGEKLVCKLNKSLYGLKQSGRNWNKMLHDFLIEIDFV 86
BLAST of mRNA_H-paniculata_contig19165.4811.1 vs. uniprot
Match: W7T0D1_9STRA (Gag-pol polyprotein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T0D1_9STRA) HSP 1 Score: 75.9 bits (185), Expect = 1.180e-13 Identity = 39/82 (47.56%), Postives = 51/82 (62.20%), Query Frame = 0
Query: 7 VFSLAAKHDFELEGMDVDVAYFNAPVEEELFVKLPPAFSPF-SRDITFVRRLHKSLYGLKQSGRNWSNTLDDFLVGIGLVFH 87
V +LA D EL+ MDVD AY + +EE++++K PP + + S V RL KSLYGLKQSGRNW +D + G G FH
Sbjct: 328 VLALACILDLELDNMDVDTAYLQSDLEEKVYIKQPPGYEQYGSNGEELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYG--FH 407
BLAST of mRNA_H-paniculata_contig19165.4811.1 vs. uniprot
Match: W7TJ26_9STRA (Gag-pol polyprotein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJ26_9STRA) HSP 1 Score: 75.5 bits (184), Expect = 1.610e-13 Identity = 38/85 (44.71%), Postives = 52/85 (61.18%), Query Frame = 0
Query: 1 MSIFCTVFSLAAKHDFELEGMDVDVAYFNAPVEEELFVKLPPAFSPFSRDI-TFVRRLHKSLYGLKQSGRNWSNTLDDFLVGIGL 84
M+ V +LA D EL+ MDVD AY + +EE++++K PP + + + V RL KSLYGLKQSGRNW +D + G GL
Sbjct: 284 MTTIRLVLALACILDLELDNMDVDTAYLQSDLEEKVYIKQPPGYEKYGPNGGELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGL 368
BLAST of mRNA_H-paniculata_contig19165.4811.1 vs. uniprot
Match: A0A6S7HLY2_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HLY2_PARCT) HSP 1 Score: 75.1 bits (183), Expect = 2.160e-13 Identity = 33/77 (42.86%), Postives = 51/77 (66.23%), Query Frame = 0
Query: 10 LAAKHDFELEGMDVDVAYFNAPVEEELFVKLPPAFSPFSRD-ITFVRRLHKSLYGLKQSGRNWSNTLDDFLVGIGLV 85
LAA+++ + MDV A+ + P++ E+F++ P F S + + V RL KSLYGLKQSGRNW+ LD++L+ G +
Sbjct: 268 LAAQYNLTVHQMDVKTAFLHVPIDHEIFMEQPMGFEELSENGVKLVYRLKKSLYGLKQSGRNWNRVLDEYLISDGFI 344
BLAST of mRNA_H-paniculata_contig19165.4811.1 vs. uniprot
Match: W7T9Y7_9STRA (Retrotransposon ty1-copia subclass n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T9Y7_9STRA) HSP 1 Score: 71.2 bits (173), Expect = 4.360e-13 Identity = 36/82 (43.90%), Postives = 50/82 (60.98%), Query Frame = 0
Query: 7 VFSLAAKHDFELEGMDVDVAYFNAPVEEELFVKLPPAFSPFSRD-ITFVRRLHKSLYGLKQSGRNWSNTLDDFLVGIGLVFH 87
+ ++A D EL+ MDVD AY + +EE+++VK PP + + + V LHKSLYGLKQSG NW +D + G G FH
Sbjct: 54 ILAIACILDLELDNMDVDTAYLQSDLEEKIYVKQPPGYEQYGPNGEELVCLLHKSLYGLKQSGINWHKKIDGWFRGYG--FH 133
BLAST of mRNA_H-paniculata_contig19165.4811.1 vs. uniprot
Match: A0A7D9L0S1_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9L0S1_PARCT) HSP 1 Score: 72.0 bits (175), Expect = 5.000e-13 Identity = 35/77 (45.45%), Postives = 50/77 (64.94%), Query Frame = 0
Query: 10 LAAKHDFELEGMDVDVAYFNAPVEEELFVKLPPAFSPFSRDITF-VRRLHKSLYGLKQSGRNWSNTLDDFLVGIGLV 85
LA +++ + MDV AY NAP++ EL+V+ P F+ +D + V +L KSLYGLKQSGRNW++ L LV G +
Sbjct: 80 LAMQYNLTIHQMDVKTAYLNAPIDCELYVEQPEGFTMTGKDGEYLVYKLRKSLYGLKQSGRNWNSVLHSHLVSEGFI 156
BLAST of mRNA_H-paniculata_contig19165.4811.1 vs. uniprot
Match: W7TCB8_9STRA (Gag-pol polyprotein n=3 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TCB8_9STRA) HSP 1 Score: 73.9 bits (180), Expect = 5.160e-13 Identity = 39/82 (47.56%), Postives = 51/82 (62.20%), Query Frame = 0
Query: 7 VFSLAAKHDFELEGMDVDVAYFNAPVEEELFVKLPPAFSPF-SRDITFVRRLHKSLYGLKQSGRNWSNTLDDFLVGIGLVFH 87
V +LA D EL+ MDV+ AY + +EE+++VK PP + + S V RL KSLYGLKQSGRNW +D + G G FH
Sbjct: 70 VLALACILDLELDNMDVEPAYLQSDLEEKVYVKQPPGYEQYGSNGEELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYG--FH 149 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig19165.4811.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig19165.4811.1 ID=prot_H-paniculata_contig19165.4811.1|Name=mRNA_H-paniculata_contig19165.4811.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=117bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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