mRNA_H-paniculata_contig19165.4812.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig19165.4812.1 vs. uniprot
Match: A0A151R6U8_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=5 Tax=Cajanus cajan TaxID=3821 RepID=A0A151R6U8_CAJCA) HSP 1 Score: 187 bits (476), Expect = 1.910e-45 Identity = 183/686 (26.68%), Postives = 295/686 (43.00%), Query Frame = 2
Query: 131 GLRFAIIFADDYSRMRKV*TLKHKSEALWTLKQFERDIAKAKGLQIQCLQSDQRGELRGEAFRQFCAGNGIKQEFSAAYTPQQNGVVDRSWRSVFEMTRSKMITANMGRRYWAKAARAAVYCLNRAPTRPHNGGTPNEVWHNTTPKLKHLRVFGCMAYVMFQSQQRQKLDDQAWVGVFLGYNEDSPSYRINDPETIASS*AGT*DLTKRIS*PVIADSWSTTRPET*KACFST----VGHTSRDI----APEPNEEM*PTRKTQRQRRLAPAPTRTAP*AMTIIMKTIMTRR*TMLNQKLKTHRRSRNLRQKH*RAQRQANGARQWRRNGGRWSNMGCGIARTRGGYW*GGRRSVPNEFSSPH*SRAAAWHVT-----------------KRD**LKVYHAWRVKLSLKPVPP*LACRYFVLFSAWPPNMISN*KAWT*MW-----HISMPP*KKNCL--------LSYRPRFPLSLEI*RLCAAYIKACMASSRAAETGVTLLTIFL--LG*D*CSTTDLCLYFSRDEGGETEIPVAVYVDD-LVIAEHREKVDEFKHNISRRFRMKDLGCLSRVLRIEVRRDRPDGTISISQGCYICEVLKRYSFDGCRGMPTPVEGKVKILEPDSGRNGIS------IEYRGMVGPLMYASIGTRPDIAYAVQQAARFMEDPCREDISTCKRI 2047
G ++ + F DDYSR V +K KS+ K+F+ + G +I+CL++D GE F FC GIK++F+ A+TPQQNGV +R R++ E TR+ + TA + + +WA+A + A Y +NR+P+ TP E+W+ L VFGC YVM+ SQ+R KLD ++ +FLGY ++ YR+ DP A +++ + V A++ E T +G S++ A + ++E P R T+ +M + +L ++ G S + + W ++ E + H R W + KRD +V +R +L +K + +FS P ++ + M H+ K L +P L K+ +A F+ LG + S+ D C Y++R + + I + +YVDD LV+ +++++ E K ++R F MKDLG +++L +++ RDR + I +SQ Y+ +VL+R++ C+ + TP+ K+ S N + Y VG LMYA I TRPDIA AV +RFM DP RE S KRI
Sbjct: 449 GAKYFVSFIDDYSRRLWVYPIKKKSDVFPVFKEFKAQVELDTGKRIKCLRTDNGGEYIDGDFLAFCKQEGIKRQFTVAHTPQQNGVAERMNRTLLERTRAMLRTAGLAKSFWAEAVKTACYLINRSPSTAIGLKTPMEMWNGKPSNYSSLHVFGCPVYVMYNSQERTKLDPKSRKCIFLGYADNVKGYRLWDPT------ARKVVVSRDV---VFAETELQKEQENDSTIKDTSIVEIGGKSKEDDTSEAEQEHDEQEPNEDNDGDVRRTTRQTKKPSWHSDYVMASHDAY--CLLTEE-------------------------------GEPSTFQEALRSSDVSQW---MAAMHEEIEALH--RNKTWELVDLPKGRKAIGCKWVYKIKRDGNDQV-ERYRARLVVKGYAQKEGIDFNEIFS--PVVRLTTIRVVLAMCAAFNLHLEQLDVKTAFLHGELQEEIYMLQPEGFKEQGKENLVCRLTKSLYGLKQAPRCWYKRFDSFIISLGYNRLSS-DHCTYYNRFDDNDFII-LLLYVDDMLVVGPNKDQIQELKAQLAREFDMKDLGPANKILGMQIHRDRKNRRIWLSQKNYLLKVLRRFNMQDCKPISTPLPVNYKLSSSMSPSNEAERMEMSRVPYASAVGSLMYAMICTRPDIAQAVGAVSRFMADPGREHWSIVKRI 1082
BLAST of mRNA_H-paniculata_contig19165.4812.1 vs. uniprot
Match: B8YLY7_LOTJA (Gag-Pol polyprotein n=1 Tax=Lotus japonicus TaxID=34305 RepID=B8YLY7_LOTJA) HSP 1 Score: 182 bits (462), Expect = 1.090e-43 Identity = 185/680 (27.21%), Postives = 287/680 (42.21%), Query Frame = 2
Query: 131 GLRFAIIFADDYSRMRKV*TLKHKSEALWTLKQFERDIAKAKGLQIQCLQSDQRGELRGEAFRQFCAGNGIKQEFSAAYTPQQNGVVDRSWRSVFEMTRSKMITANMGRRYWAKAARAAVYCLNRAPTRPHNGGTPNEVWHNTTPKLKHLRVFGCMAYVMFQSQQRQKLDDQAWVGVFLGYNEDSPSYRINDPETIASS*AGT*DLTKRIS*PVIADSWSTTRPET*KACFSTVGHTSRDIAPEPNEEM*PTRKTQRQRRLAPAPTRTAP*AMTIIMKTIMTRR*TMLNQKLKTHRRSRNLRQKH*RAQRQANGARQWRRNGGRWSNMGCGIARTRGGYW*GGRRSVPNEFSSPH*SRAAAWHVT-----------------KRD**LKVYHAWRVKLSLK---------------PVPP*LACRYFVLFSAWPPNMISN*KAWT*MWHISMPP*KKNCLLSYRPRFPLSLEI*RLCAAYIKACMASSRAAETGVTLLTIFL--LG*D*CSTTDLCLYFSRDEGGETEIPVAVYVDD-LVIAEHREKVDEFKHNISRRFRMKDLGCLSRVLRIEVRRDRPDGTISISQGCYICEVLKRYSFDGCRGMPTPVEGKVKI---LEPDSGRNGIS---IEYRGMVGPLMYASIGTRPDIAYAVQQAARFMEDPCREDISTCKRI 2047
G ++ + F DDYSR V +K KS K+F+ + G +I+CL++D GE F FC GI ++F+ A+TPQQNGV +R R++ E TR+ + TA + + +WA+AA+ A Y +NR+P+ TP E+W LRVFGC YVM+ SQ+R KLD ++ FLGY ++ YR+ DP A +++ + + ++ + T + + E N E P A R R T +K H S + H A G S + + W ++ E + H R W + KRD +V +R +L +K PV R + A + T H + + + +P E L K+ +A F+ LG + S+ D C Y+ R + G+ I + +YVDD LV+ ++++V E K ++R F MKDLG +++L +++ RDR D I +SQ Y+ +VL+R++ + TP+ K+ + P S + + Y VG LMYA I TRPDIA AV +RFM DP +E + KRI
Sbjct: 499 GAKYFVSFIDDYSRRLWVYPIKKKSGVYSVFKEFKAQVELETGKRIKCLRTDNGGEYTDGDFLAFCKQEGITRQFTVAHTPQQNGVAERMNRTLLERTRAMLKTAGLAKSFWAEAAKTACYVINRSPSTAIGLKTPMEMWKGKPGDYSSLRVFGCPVYVMYNSQERTKLDPKSRRCTFLGYADNVKGYRLWDPT------ARKIFVSRDV---IFVENELQKEQKNDGTTKETATVEIEEKSGEENSEAEPXXXXXXXXXXXDAEPR----------------RTTRQIRKPSWH--SEYVMASH--------DAYCLLSEDGEPSTFHEAVNGSDASLW---MAAMQEEIEALH--RNNTWELVELPKGRKAIGNKWVFKIKRDGNDQV-ERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTIRIVLAMCAAFELHLEQLDVKTAFLHGEL----EEEIYMLQPEGFEEKERENLVCRLTKSLYGLKQAPRCWYKRFDSFIMSLGYNRLSS-DHCTYYKRFDDGDFII-LLLYVDDMLVVGPNKDRVQELKAQLAREFDMKDLGPANKILGMQIHRDRKDRKIWLSQKNYLQKVLRRFNMQDYNPISTPLPVNYKLSSSMIPSSEAERMEMSRVPYASAVGSLMYAMICTRPDIAQAVGTVSRFMADPGKEHWNAVKRI 1131
BLAST of mRNA_H-paniculata_contig19165.4812.1 vs. uniprot
Match: Q7G6A8_ORYSJ (Os10g0130700 protein n=3 Tax=Oryza sativa TaxID=4530 RepID=Q7G6A8_ORYSJ) HSP 1 Score: 182 bits (462), Expect = 1.190e-43 Identity = 191/703 (27.17%), Postives = 300/703 (42.67%), Query Frame = 2
Query: 131 GLRFAIIFADDYSRMRKV*TLKHKSEALWTLKQFERDIAKAKGLQIQCLQSDQRGELRGEAFRQFCAGNGIKQEFSAAYTPQQNGVVDRSWRSVFEMTRSKMITANMGRRYWAKAARAAVYCLNRAPTRPHNGGTPNEVWHNTTPKLKHLRVFGCMAYVMFQSQQRQKLDDQAWVGVFLGYNEDSPSYRI------------------------NDPETIASS*-------------AGT*DLTKRIS*PVIADSW--STTRPET*KACFSTVGHTS--RDIAPEPNEEM*PTRKTQRQRRLAPAPTRTAP*AMTIIMKTIMTRR*TMLNQKLKTHRRSRNLRQKH*RAQRQANGARQWRR----------NGGRWSNMGCGIARTRGGY-W*GGRRSVPNEFSSPH*SRAAAWHVTKRD**LKVYHAWRVKLSLKPVPP*LACRYFVLFSAWPPNMISN*KAWT*MWHISMPP*KKNCLLS---YRPRFPLSLE------I*RLCAAYIKACMASSRA--AETGVTLLTIFLLG*D*CSTTDLCLYFSRDEGGETEIPVAVYVDDLVIA-EHREKVDEFKHNISRRFRMKDLGCLSRVLRIEVRRDRPDGTISISQGCYICEVLKRYSFDGCRGMPTPVEGKVKILEPDSGRNGISIEYRGMVGPLMYASIGTRPDIAYAVQQAARFMEDPCREDISTCKRI 2047
G ++ ++ DD SR + L K EA +KQF+ + G +++ L++D+ GE F +CA +G+++E +A Y+PQQNGVV+R ++V RS + A M +W +A AAVY LNR+PT+ NG TP+E WH P ++HLRVFGC+ YV +KLDD+ VF+GY + S +YR+ DPET A+ + DL ++ S PV ++ ST P + + V S + P NE R+ Q I+ T +Q L +L + A++Q WR+ + WS + G W + P+ H +R A ++ + PV R + ++ K W + H+ + N L Y + P +E + RL A + + RA A+ TL+++ + S T+ +Y G + + V VYVDDL+I+ ++D FK + ++FRM DLG LS L +EV + D + +SQ Y ++L++ +GC P+E ++K+ G S YR VG L Y + TRPD+AY+V +RFME P E + K I
Sbjct: 594 GRKYFLLLVDDMSRHMWIRLLSGKHEAATAIKQFQVGVELESGRKLRALRTDRGGEFTSVEFMDYCADHGMRRELTAPYSPQQNGVVERRNQTVVAAARSMLKAAGMPACFWGEAVVAAVYVLNRSPTKALNGVTPHEAWHGRRPSVEHLRVFGCVGYVKTVKPNLRKLDDRGTRMVFIGYEQGSKAYRMYDPVARRVCVSRDVVFDEAATWAWRDPETEATEEEEFTVDFFVNPVDSVVADLGEQASTPVQGGTYPASTATPPSPPEVPAGVEFCSPPNSVTPGTNEGPIRYRRVQ-----------------DILSATEPVLDFDYSDQCLLASEEPMSLAE----AEQQLC----WRQAMQEELKSIEDNQTWSFAELPVGHKAIGLKWVYKVKKDPSGVVVKHKARLVAKGYVQQQ-------GIDFEEVFAPVARMETVRLLIA--------VAANKGWE-IHHMDVKSAFLNGDLEEEVYVVQPPGFIEKGKEGQVLRLKKA-LYGLKQAPRAWNAKLHNTLISLNFIK----SETESAVYVRGT--GSSRLIVGVYVDDLIISGAQASEIDFFKEEMKKKFRMSDLGLLSYYLGMEVV--QKDDGVFLSQTAYAAKILEKTGMEGCNSTQVPMEARLKLKRESGGEGVDSTMYRSTVGSLRYL-VNTRPDLAYSVGYVSRFMEKPTSEHWAAVKHI 1245
BLAST of mRNA_H-paniculata_contig19165.4812.1 vs. uniprot
Match: B8YLY6_MEDTR (Gag-Pol polyprotein n=4 Tax=Medicago truncatula TaxID=3880 RepID=B8YLY6_MEDTR) HSP 1 Score: 180 bits (456), Expect = 6.060e-43 Identity = 185/679 (27.25%), Postives = 281/679 (41.38%), Query Frame = 2
Query: 131 GLRFAIIFADDYSRMRKV*TLKHKSEALWTLKQFERDIAKAKGLQIQCLQSDQRGELRGEAFRQFCAGNGIKQEFSAAYTPQQNGVVDRSWRSVFEMTRSKMITANMGRRYWAKAARAAVYCLNRAPTRPHNGGTPNEVWHNTTPKLKHLRVFGCMAYVMFQSQQRQKLDDQAWVGVFLGYNEDSPSYRINDPETIASS*AGT*DLTKRIS*PVIADSWSTTRPET*KACFSTVGHTSRDIAPEPNEEM*PTRKTQRQRRLAPAPTRTAP*AMTIIMKTIMTRR*TMLNQKLKTHRRSRNLRQKH*RAQRQANGARQWRRNGGRWSNMGCGIARTRGGYW*GGRRSVPNEFSSPH*SRAAAWHVT-----------------KRD**LKVYHAWRVKLSLK---------------PVPP*LACRYFVLFSAWPPNMISN*KAWT*MWHISMPP*KKNCLLSYRPRFPLSLEI*RLCAAYIKACMASSRAAETGVTLLTIFLLG*D*CS-TTDLCLYFSRDEGGETEIPVAVYVDD-LVIAEHREKVDEFKHNISRRFRMKDLGCLSRVLRIEVRRDRPDGTISISQGCYICEVLKRYSFDGCRGMPTPVEGKVKILEPDSGRNGIS------IEYRGMVGPLMYASIGTRPDIAYAVQQAARFMEDPCREDISTCKRI 2047
G R+ + F DDYSR V +K KS+ K F+ I +I+CL++D GE F FC GI ++F+ A+TPQQNGV +R R++ E TR+ + TA M + +WA+AA+ A Y +NR+P+ + TP E+W L VFGC YVM+ SQ++ KLD ++ +FLGY ++ YR+ DP T R + S E TS++ A EE + + RR T QK S + H A G S + + W ++ E + H R W + KRD +V +R +L +K PV R + A + T H + + + +P L K+ +A F++ D ++D C Y+ R +G + I + +YVDD LV+ ++++V E K ++R F MKDLG +++L +++ RDR D I +SQ Y+ +VL+R++ C+ + TP+ K+ S N + Y VG LMYA I TRPDIA AV +RFM DP +E + KRI
Sbjct: 499 GARYFVSFIDDYSRRLWVYPIKKKSDVFPVFKAFKAQIELETEKKIKCLRTDNGGEYVDGEFLAFCKQEGIVRQFTVAHTPQQNGVAERMNRTLLERTRAMLKTAGMAKSFWAEAAKTACYVINRSPSTAIDLKTPMEMWKGKPVDYSSLHVFGCPVYVMYNSQEKTKLDPKSRKCIFLGYADNVKGYRLWDP-------------TARK----VVVSRDVVFAENELQSEQKNDSTSKETAIVQMEE--------KSKXXXXXXXXXXXXXXXXXXVNDGVRRSTRQTQKPSWQ--SDYVMTSH--------DAYCLITEEGEPSTFHEALNGSDASQW---MTAMHEEMEALH--RNKTWELVELPKGRKAIGNKWVYKIKRDGNDQV-ERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTIRVVLAMCAALDLHLEQLDVKTAFLHGEL----EEEIYMLQPEGFKEQGKENLVCRLTKSLYGLKQAPRCWYKRFDSFIISLDYNRLSSDHCTYYKRFDGNDFII-LLLYVDDMLVVGPNKDRVQELKAQLAREFDMKDLGPANKILGMQIHRDRKDRKIWLSQKNYLRKVLRRFNMQDCKPISTPLPVNFKLSSGMSPSNEAERMEMSRVPYASAVGSLMYAMICTRPDIAQAVGVVSRFMADPGKEHWNAVKRI 1131
BLAST of mRNA_H-paniculata_contig19165.4812.1 vs. uniprot
Match: A0A060SSE0_PYCCI (Integrase catalytic domain-containing protein n=1 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SSE0_PYCCI) HSP 1 Score: 179 bits (453), Expect = 1.610e-42 Identity = 152/533 (28.52%), Postives = 235/533 (44.09%), Query Frame = 1
Query: 1015 SSEPKSTAEALKSPEAGKWRAAVEEEWRALVKHGMWDSEDPGRLLVGRKAICTKRIFKPTLK*GGSVARYKARLVAQGLSRVEGEAFFETGASVARMSIFCTVFSLAAKHDFELEGMDVDVAYFNAPVEEELFVKLPPAFSPFSRDITFVRRLHKSLYGLKQSGRNWSNTLDDFLVGIGLVFHYRPMLVLLSRRRRRDRNSRCRLCRRPGHR*TS*ESRRVQAQHKSAV*DERLGLPLARVENRSTTRPPRWYHINIPRLLHLRGTEKIQF*RVSRHAHP-----------CRGKSEDFGTRQWEKWHFN*IQRHGRTTHVCLDRN*T*YSIRGTTSSTFYG---------GPVSGRYQYMQAHFRYLTSVPDLGIMFGGK---SNGHDLEGFVDADWAEDVGYRKSTTGYIFKLHGGAISWCSSKQQLEAEFRMQEDHNIL----------------------------------EDESAINLSMGSGAHCRTKHIGVNWHGIREWLREGILALKYVQTGDQLADSLTKALS 2442
S EP++ EA+ P+A +W+AA EE + K ++D + R RK + K +F+ G + +YKARLVA+G ++VEG + +T A V + + + + AAKHD E+ MDV A+ N +EEE+F++ PP F +D V RL KSLYGLKQ+ R W + +G V R + D + + A+ ++AV + + L L S RW I ++H R + I +S+H + CR S Q + N + R L Y++ GT + P + + ++YL D ++F G S G +L G+ +ADWA DV R+S TG+IFKL AISW S KQ A + ++ L +++SA++L+ S H RTKHI + H IR+ + + + ++Y+ TGDQ+AD LTKAL+
Sbjct: 961 SDEPRTYQEAMSRPDAEQWKAACAEELLSFAKAELYDEVERPR---NRKVVDCKWVFRIKHGPDGKIQKYKARLVAKGFTQVEGVDYTDTFAPVTKFASIRMLLAFAAKHDLEVHQMDVKSAFLNGDLEEEIFMEAPPGFQ---QDKAHVWRLQKSLYGLKQASREWYKKVRALFESLGYSRSNADHSVFYKRGKDGDLTVVAVYV----------DDMLIFAKDRAAV--DHIKLELGVPYEMSDLGEARW--ILGMEIIHDRARKTIT---LSQHQYVENILKTHGMANCRPVSTPMAPNQ-KLLKLNVPEVDERAYQSALGS--LMYAMLGTRPDLAFAVGMLSKHAASPGKDHWTALMRVYKYLRGTSDHALVFDGSALCSEGGNLVGYSNADWAGDVNDRRSVTGFIFKLGDAAISWQSKKQDCVALSTTEAEYIALAAASKEALWLRTFLSELYGMTFDAPGSPGTLILVDNQSAMSLAKNSTFHDRTKHIAIRHHFIRDEIEKQAIHVEYIPTGDQVADILTKALA 1467
BLAST of mRNA_H-paniculata_contig19165.4812.1 vs. uniprot
Match: A0A4Y1RLQ4_PRUDU (Transposable element protein n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1RLQ4_PRUDU) HSP 1 Score: 174 bits (441), Expect = 5.800e-42 Identity = 183/694 (26.37%), Postives = 286/694 (41.21%), Query Frame = 2
Query: 116 TKAFEGLRFAIIFADDYSRMRKV*TLKHKSEALWTLKQFERDIAKAKGLQIQCLQSDQRGELRGEAFRQFCAGNGIKQEFSAAYTPQQNGVVDRSWRSVFEMTRSKMITANMGRRYWAKAARAAVYCLNRAPTRPHNGGTPNEVWHNTTPKLKHLRVFGCMAYVMFQSQQRQKLDDQAWVGVFLGYNEDSPSYRINDPETIASS*AGT*DLTKRIS*PVIA--------DSWSTTRPET*KACFSTVGHTSRDIAPEPNEEM*PTR-------------KTQRQRRLAPAPTRTAP*AMTIIMKTIMTRR*TMLNQKLKTHRRSRNLRQKH*RAQRQANGARQWRRNGGRWSNMGCGI--------ARTRGGYW*GGRRSVPNEFSSPH*SRAAAWHVT-----KRD**LK-VYHA----------WRVKLSLKPVPP*LACRYFVLFSAWPP----NMISN*KAWT*MWHISMPP*KKNCLLSYR---------PRFPLSLEI*RLCAAYIKACMASSRAAETGVTLLTIFL--LG*D*CSTTDLCLYFSRDEGGETEIPVAVYVDDLVIA-EHREKVDEFKHNISRRFRMKDLGCLSRVLRIEVRRDRPDGTISISQGCYICEVLKRYSFDGCRGMPTPVEGKVKILEPDSGRNGISIEYRGMVGPLMYASIGTRPDIAYAVQQAARFMEDP 2014
T + G R+ + F DDYSR V LK+KSE K F+ K G ++ L+SDQ GE F F NGIK +F+A YTPQQNGV +R R++ E+ RS + M R+WA+A AVY LNRA + G TP E W P + HLR+FG +AY + R+KLDD++ + +GY+E + +Y++ +P LT +I +++ ++W+ + E +G + D+ P + + QR+ A P+ P + +++ NGG +N + ++ W +++ E S + W + K+ +K VY ++ +L K Y +F+ M+ A W + K L + P + E ++C KA +A + + F G C + LY ++ GE I V +YVDDL+ + + D FK +S+RF M DLG L L IEV+++ + I ISQ Y E+LKR+ + + + TP+E VKI + D +R +VG L+Y + TRPD+ YAV +RFME P
Sbjct: 3 TTSTGGNRYFLTFIDDYSRKTWVYFLKYKSEVFDYFKVFKALAEKQSGFALKTLRSDQGGEFSSNVFENFLKENGIKHQFTARYTPQQNGVAERKNRTIMELARSMLKAKAMPNRFWAEAVACAVYLLNRASSNSVEGKTPQEAWSGLKPCISHLRIFGSIAYSHIPDETRRKLDDKSEKCILVGYSEKAKAYKLFNP------------LTNKI---IVSRDVKFNEEEAWNWSEAENQSPILLDIGLENPDLTPPTTSSQGLSXXXXXXXXXXXEISRGQRRSTRAHQPSTRYPSSDYVLIT------------------------------------------NGG--TNFALFVDADPIMFEEASKDEKW---VKAMDQEIDSI--KKNDTWELVDLPQGKKPIGVKWVYKTKLNAQGEVEKYKARLVAKGYKQNYGIDYNEVFAPVARFDTIRMVLALAAQN-CWKVFQMDVKSAFLQGFLEEEVYVVQPPGYVQGNEETKVCRLK-KALYGLKQAPRAWYSRIDAFFQEYGFHKCPY-EHTLYTKKNSQGEILI-VCLYVDDLIFTGSNAQMCDNFKMIMSQRFEMTDLGLLHFFLGIEVKQN--ENGIYISQKKYAKELLKRFRLENAKSIATPMEVGVKIGKNDGSTMVNQTLFRSLVGGLLYLTT-TRPDLTYAVSFLSRFMESP 625
BLAST of mRNA_H-paniculata_contig19165.4812.1 vs. uniprot
Match: Q6BCY1_IPOBA (Gag-Pol n=1 Tax=Ipomoea batatas TaxID=4120 RepID=Q6BCY1_IPOBA) HSP 1 Score: 175 bits (443), Expect = 2.450e-41 Identity = 179/690 (25.94%), Postives = 290/690 (42.03%), Query Frame = 2
Query: 131 GLRFAIIFADDYSRMRKV*TLKHKSEALWTLKQFERDIAKAKGLQIQCLQSDQRGELRGEAFRQFCAGNGIKQEFSAAYTPQQNGVVDRSWRSVFEMTRSKMITANMGRRYWAKAARAAVYCLNRAPTRPHNGGTPNEVWHNTTPKLKHLRVFGCMAYVMFQSQQRQKLDDQAWVGVFLGYNEDSPSYRINDP---ETIASS*AGT*DLTKRIS*PVIADSWSTTRPET*KACFSTVGHTSRDIAPEP-------NEEM*PTRKTQRQRRLAPAPTRTAP*AMTIIMKTIMTRR*TMLNQKLKTHRRSRNLRQKH*RAQRQANGARQWRRNGGRWSNMGCGIARTRGGYW*GGRRSVPNEFSSPH*SRAAAWHVT-----------------KRD**LKVYHAWRVKLSLK---------------PVPP*LACRYFVLFSAWPPNMISN*KAWT*MWHISMPP*KKNCLLSYRPRFPLSLEI*RLCAAYIKACMASSRAAETGVTLLTIFL--LG*D*CSTTDLCLYFSRDEGGETEIPVAVYVDDLVIA-EHREKVDEFKHNISRRFRMKDLGCLSRVLRIEVRRDRPDGTISISQGCYICEVLKRYSFDGCRGMPTPVEGKVKI---LEP--DSGRNGIS-IEYRGMVGPLMYASIGTRPDIAYAVQQAARFMEDPCREDISTCKRI 2047
G ++ + F DDYSR V +K KS+ T K F+ + G +I+C ++D GE E F FC GIK++F+ AYTPQQNGV +R R++ E TR+ + A + + +WA+A A Y +NRAP+ TP E+W +L +FG + Y M+ +Q+ KLD ++ FLGY + YR+ DP + + S + R+ + DS +PET + + TR++ R++R PT + M + N A G S I + W ++ E + H + W + KR+ +V +R +L +K PV R + A + T H + + + +P E L K+ +A F+ LG + + D C YF R G + + + +YVDD+++A +++ +DE K ++R F MKDLG +++L +++ RDR + I +SQ Y+ ++L R+S C+ + TP+ +K+ + P + GR +S + Y VG LM+A I TRPDIA AV +R+M +P RE + KRI
Sbjct: 489 GAKYFVSFIDDYSRRCWVYPIKKKSDVFATFKAFKARVELDSGKKIKCFRTDNGGEYTSEEFDDFCKKEGIKRQFTVAYTPQQNGVAERMNRTLLERTRAMLRAAGLEKSFWAEAVNTACYLVNRAPSTAIELKTPMEMWTGKPVDYSNLHIFGSIVYAMYNAQEITKLDPKSRKCRFLGYADGVKGYRLWDPTAHKVVISR--DVIFVEDRLQRGEVDDSTEKEKPETTQIXXXXXXXXXXXXXXXXXXXXXXXSSGAPTTRQSDREKR---RPTWHSDYVM-------------------------------------EGNVAYCLLTEDGEPSTFQEAINSSDVSQW---TAAMQEEIEALH--KNNTWDLVPLPQGRKPIGNKWVFKIKRNGDDQV-ERYRARLVVKGYAQKEGIDFNEIFSPVVRLTTVRVVLAMCATFNLHLEQLDVKTAFLHGDL----EEEIYMLQPEGFEDKENQNLVCRLNKSLYGLKQAPRCWYKRFDSFIMCLGYNRLNA-DPCAYFKRF-GKDNFVILLLYVDDMLVAGPNKDHIDELKAQLAREFEMKDLGPANKILGMQIHRDRGNRKIWLSQKNYLKKILSRFSMQDCKSISTPLPINLKVSSSMSPSNEEGRMEMSRVPYASAVGSLMFAMICTRPDIAQAVGVVSRYMANPGREHWNCVKRI 1124
BLAST of mRNA_H-paniculata_contig19165.4812.1 vs. uniprot
Match: UPI001C35D1C3 (Uncharacterized protein n=1 Tax=Carya illinoinensis TaxID=32201 RepID=UPI001C35D1C3) HSP 1 Score: 175 bits (444), Expect = 2.550e-41 Identity = 171/676 (25.30%), Postives = 281/676 (41.57%), Query Frame = 2
Query: 131 GLRFAIIFADDYSRMRKV*TLKHKSEALWTLKQFERDIAKAKGLQIQCLQSDQRGELRGEAFRQFCAGNGIKQEFSAAYTPQQNGVVDRSWRSVFEMTRSKMITANMGRRYWAKAARAAVYCLNRAPTRPHNGGTPNEVWHNTTPKLKHLRVFGCMAYVMFQSQQRQKLDDQAWVGVFLGYNEDSPSYRINDPETIASS*AGT*DLTKRIS*PVIADSWSTTRPET*KACFSTVGHTSRDIAPEP------NEEM*PTRKTQRQRRLAPAPTRTAP*AMTIIMKTIMTRR*TMLNQKLKTHRRSRNLRQKH*RAQRQANGARQWRRNGGRWSNMGCGIARTRGGYW*GGRRSVPNEFSSPH*SRAAAWHVTKRD**LKVYH---AWRVKLS---------------------------LKPVPP*LACRYFVLFSAWPPNMISN*KAWT*MWHISMPP*KKNCLLSYRPRFPLSLEI*RLCAAYIKACMASSRAAETGVTLLTIFL--LG*D*CSTTDLCLYFSRDEGGETEIPVAVYVDDLVIAEHR-EKVDEFKHNISRRFRMKDLGCLSRVLRIEVRRDRPDGTISISQGCYICEVLKRYSFDGCRGMPTPVEG-----KVKILEPDSGRNGIS-IEYRGMVGPLMYASIGTRPDIAYAVQQAARFMEDPCRE 2023
G + + F DD+SR + LKHKSE K + + GL+++CL+SD GE F+++CA GI+ E + TPQQNGV +R R++ E RS + A + +WA A AVY +NR P+ P + G P+EVW K HL+ FGC++YV+ S R KL+ ++ F+GY +++ YR D + + ++I + + S P+ + C S AP P +E PT +R R P R P LN L T +GG + + W ++ +E S ++ W +T+ K H +RVK PV R + A + T H + +++ + F + + +C K+ +A F+ G C D C Y + + I + +YVDD++IA ++++ K ++S F MKDLG ++L + + RDR GT+ +SQ Y+ +VL R++ D + + TP+ K ++ E + ++ +S + Y +G LMYA + TRPDIA+AV +R+M +P ++
Sbjct: 64 GSLYYVTFIDDHSRKVWIYFLKHKSEVFNVFKICKAMVETETGLKLKCLRSDNGGEYVDGGFKEYCAALGIRMEKTIPGTPQQNGVAERMNRTINERARSMRLHAGLPPTFWADAVSTAVYLINRGPSVPLDCGLPDEVWSGKEVKFSHLKTFGCLSYVLIDSDSRSKLEAKSRKCYFIGYGDEAFGYRFWDDQGRKIIRSRNVIFNEKIMYNDKSSTTSAVAPQESEFCRDVSDEESGSSAPIPIIPQAVSEPSTPTVAVRRSVRTIRPPQRFLP----------------TLNYILLT--------------------------DGGEPQSYKETLQDENSSKW---ELAMKDEMDSLLGNQT--WELTELPSGKKALHNKWVYRVKTEHDGSKRYKARLVVKGFQQKQGIDYSEIFSPVVKITTIRMVLAMVATEDLFLEQLDVKTAFLHGDL---EEDIYMHQPEGFVVQGKEGSVCRLK-KSLYGLKQAPRQWYKKFDNFMHSAGYMRCQA-DHCCYVRHFDN--SYIILLLYVDDMLIAGASIDEINNMKKHMSEHFAMKDLGAAKQILGMRIVRDRVRGTLRLSQAEYVKKVLSRFNMDKAKPVGTPLGSHFRLSKNQLPESEEEQDYMSKVPYASAIGSLMYAMVCTRPDIAHAVGVVSRYMSNPGKQ 685
BLAST of mRNA_H-paniculata_contig19165.4812.1 vs. uniprot
Match: A0A392LYY6_9FABA (Copia-type polyprotein n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392LYY6_9FABA) HSP 1 Score: 173 bits (438), Expect = 9.650e-41 Identity = 186/677 (27.47%), Postives = 300/677 (44.31%), Query Frame = 2
Query: 137 RFAIIFADDYSRMRKV*TLKHKSEALWTLKQFERDIAKAKGLQIQCLQSDQRGELRGEAFRQFCAGNGIKQEFSAAYTPQQNGVVDRSWRSVFEMTRSKMITANMGRRYWAKAARAAVYCLNRAPTRPHNGGTPNEVWHNTTPKLKHLRVFGCMAYVMFQSQQRQKLDDQAWVGVFLGYNEDSPSYRINDPET---IASS*A----------GT*DLTKRIS*PVIADSWSTTRPET*KACFSTVGHTSRDI---APEPNEEM*PTRKTQRQRRLAPAPTRTAP*AMTIIMKTIMTRR*TMLNQKLKTHRRSRNLR------QKH*RAQRQANGARQWRRNGGRWSNMGCGI-ARTRGGYW*GGRRSVPNEFSSPH*SRAAAW-HVTKRD**LKVYHAWRVKLSLKPVPP*LACRYFVLFSA---WPPNMISN*KAWT*M--WHISMPP*KKNCLLSYRPRF-----PLS-LEI*RLCAAYI--KACMASSRAAETGVTLLTIFLL--G*D*CSTTDLCLYFSRDEGGETEIPVAVYVDDLVIAEH-REKVDEFKHNISRRFRMKDLGCLSRVLRIEVRRDRPDGTISISQGCYICEVLKRYSFDGCRGMPTPVEGKVKILEPDSGRNGISIEYRGMVGPLMYASIGTRPDIAYAVQQAARFMEDPCREDISTCKRI 2047
R+ + F DD+SR V LK+KS AL K+F + K G I CL++D+ GE F+++C NGIK++ + AYTPQQNG+ +R R++ +M RS + ++ + +W +A A+Y LNR+P TP E W ++ P +KHLRVFGC+AY R+KLDD++ +FLG +E+S +YR+ +P T I S D +K+++ VI+D + T D+ A PN + TR P + TI ++ + +RNL + + +A+ +++WR M I A + W V + W + TK + +V ++ +L K Y +F+ W + I + A M W++ K L PL ++ R Y KA +A + + + G + C + L+ D+ G I +++YVDDL+ + E V +FK+++ F M DLG + L IEV ++ D I I Q Y E+L+R++ D + +P+ K+ + D G +++ +VG LMY + TRPD+ +AV ARFME P + KRI
Sbjct: 409 RYVLTFIDDFSRKTWVYFLKNKSSALNYFKKFRSMVEKESGSAICCLRTDRGGEFNSSEFKEYCEENGIKRQLTTAYTPQQNGIAERKNRTIMDMVRSMISGKDVPKSFWPEAVNWAIYILNRSPAAALPNMTPEEAWSSSKPTVKHLRVFGCIAYTHVPDSHRKKLDDKSVKCIFLGISEESKAYRLYNPTTKKIIISRDVKFVESEKWKWDEADSSKKLAEQVISDEEPDNANTNEELEADEAADTDEDVHSQASTPNSPVIDHIGASNSNLNDQGRTRKPPYWHSDYDTTI--------HEDELSDEDTRNLMAFGLCVDEDPNSYDEASKSQKWR------DAMNTEIEAIEKNNTW------VLTDLPKNAKVIGVKWIYKTKLNEKGEV-DKYKARLVAKGYAQKYGTDYKEVFAPVARW--DTIRSLLAIAAMKNWYVFQLDVKSAFLHGELTETVYVEQPLGYVKQGREDKVYKLHKALYGLKQAPRAWYSKIESYFQKEGFEKCPY-EHTLFVKVDKKGNWLI-ISLYVDDLIFTGNDSEMVQKFKNSMMNTFDMTDLGRMKHFLGIEVTQN--DQGIFICQQRYAKEILERFNMDKSNAVSSPIVTGSKLSKYDQGEEVNPTKFKQIVGSLMYLT-ATRPDLMFAVNLIARFMEHPVESHMVAAKRI 1057
BLAST of mRNA_H-paniculata_contig19165.4812.1 vs. uniprot
Match: Q7XTU6_ORYSJ (OSJNBb0034I13.10 protein n=2 Tax=Oryza sativa subsp. japonica TaxID=39947 RepID=Q7XTU6_ORYSJ) HSP 1 Score: 173 bits (438), Expect = 1.100e-40 Identity = 186/694 (26.80%), Postives = 295/694 (42.51%), Query Frame = 2
Query: 131 GLRFAIIFADDYSRMRKV*TLKHKSEALWTLKQFERDIAKAKGLQIQCLQSDQRGELRGEAFRQFCAGNGIKQEFSAAYTPQQNGVVDRSWRSVFEMTRSKMITANMGRRYWAKAARAAVYCLNRAPTRPHNGGTPNEVWHNTTPKLKHLRVFGCMAYVMFQSQQRQKLDDQAWVGVFLGYNEDSPSYRINDP-------------------------ETIASS*AGT*DLTKRIS*PVIADSWSTTRPET*KACFSTVGHTSRDIAPE-PNEEM*--PTRKTQ-------RQRRLAPAPTRTAP*AMTIIMKTIMTRR*TMLNQKLKTHRRSRNLRQKH*RAQRQANGARQWRRN-----GGRWSNMGCGIARTRGGY------W*GGRRSVPNEFSSPH*SRAAAWHVTKRD**LKVYHAWRVKLSLKPVPP*LACRYFVLFSA---WPPNMISN*KAWT*-----MWHISMPP*KKNCLLSYRPRFPLSLEI*RLCAAYIKACMASSRAAETGVTLLTIFLLG*D*CSTTDLCLYFSRDEGGETEIPVAVYVDDLVIAEHREK-VDEFKHNISRRFRMKDLGCLSRVLRIEVRRDRPDGTISISQGCYICEVLKRYSFDGCRGMPTPVEGKVKILEPDSGRNGISIEYRGMVGPLMYASIGTRPDIAYAVQQAARFMEDPCREDISTCKRI 2047
G ++ ++ DD SR + L K EA +KQF+ + G +++ L++D+ GE F +C G+++E +A Y+PQQN VV+R ++V RS + A + R+W +A AAVY LNR+PT+ +G TP E WH P ++HLRVFGC+ YV +KLDD+ VF+GY + S +YR+ DP + T D P +AD+ T +A S V P PN E PT T R RR+ + T P ++ + + + ++ + + +KH WRR N +A G+ W + P+ H +R A ++ PV R V +A W + + A+ ++ PP + + S + A Y + A+ TLL++ S T+ +Y G++++ V VYVDDL+I ++K +D FK + +RF M DLG LS L +EV + + +G I +SQ Y ++L++ +GC P+E ++K+ + +G EYR +VG L Y + TRPD+AY+V +RFME P E + K I
Sbjct: 594 GRKYFLLLVDDMSRHMWIRLLSGKHEAATAIKQFQAGVELESGRKLRALRTDRGGEFTSVEFMDYCTDRGMRRELTAPYSPQQNRVVERRNQTVVAAARSMLKAAGLPARFWGEAVVAAVYVLNRSPTKALDGVTPYEAWHGRRPSVEHLRVFGCVGYVKTVKPNLRKLDDRGTRMVFIGYEQGSKAYRMYDPVAQRVCVSRDVVFDETATWAWRDPEDAATEEEEFTVDFFVSPVAPSVADAGEQTGTPV-QAGVSPVSTGVLSSPPRAPNGEFCTPPTSVTPETDGGPVRYRRVQDILSTTEP-----VLDFDYSDQCLIATEEPTSFVEA----EKH----------ECWRRAMVEELRSVEENQTWSLAELPAGHKAIGLKWVYKLKKDPSGAIVKHKARLVAKGYVQQQ-------GVDFDEVFAPVARMETVRLLVALAAQKGWEIHHMDVKSAFLNGELEEEVYVVQPP-------GFDDKTNASKVLKLRKALYGLRQAPRAWNAKLDNTLLSLKFNK----SATESAVYVRGV--GDSKLIVGVYVDDLIITGSQKKEIDAFKLQMKQRFNMSDLGFLSYYLGMEVVQ-KGEG-IFLSQSAYAGKILEKTGMEGCNPTQVPMEARLKLSKEGTGECVDPTEYRSIVGSLRYL-VNTRPDLAYSVGYVSRFMEKPTSEHWAAVKHI 1244 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig19165.4812.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig19165.4812.1 >prot_H-paniculata_contig19165.4812.1 ID=prot_H-paniculata_contig19165.4812.1|Name=mRNA_H-paniculata_contig19165.4812.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=139bp MQAHFRYLTSVPDLGIMFGGKSNGHDLEGFVDADWAEDVGYRKSTTGYIFback to top mRNA from alignment at H-paniculata_contig19165:1018..3795+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig19165.4812.1 ID=mRNA_H-paniculata_contig19165.4812.1|Name=mRNA_H-paniculata_contig19165.4812.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2778bp|location=Sequence derived from alignment at H-paniculata_contig19165:1018..3795+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig19165:1018..3795+ >mRNA_H-paniculata_contig19165.4812.1 ID=mRNA_H-paniculata_contig19165.4812.1|Name=mRNA_H-paniculata_contig19165.4812.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=834bp|location=Sequence derived from alignment at H-paniculata_contig19165:1018..3795+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |