mRNA_H-paniculata_contig19162.4810.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig19162.4810.1 vs. uniprot
Match: A0A0C9VSW1_SPHS4 (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Sphaerobolus stellatus (strain SS14) TaxID=990650 RepID=A0A0C9VSW1_SPHS4) HSP 1 Score: 247 bits (631), Expect = 6.940e-71 Identity = 147/415 (35.42%), Postives = 226/415 (54.46%), Query Frame = 2
Query: 167 ETSAPVARMSTLRIVFSLAAEHDFKFEAMDADAAYLNAPVEEELFVTLPPEFSPFSRDIPLVRRLRKSLYSLKQSGRNRNNTLDDFLLGIGIQRSTTIPCLYFSRDEGGETDILVSVYVDNLII-A*RREKVHEFKDEISGRFRMK---------GLEVRRDRPNGTINISQGSYTRKVLKRYGSDECRGVPPPVEGKVKISAPERRSGNSTEYRGMV*SLMYTPTGTRPDLEYVVHQVARCMEDPYREDFSTCKRMFHYLSTVPDVGIMFGGKSNDHGLEEFVDADWAEDIED*KSTTPHVFKLNSGAINLCSSKQQLVTSSSTEADYITAGEAGKETVYLRELLGSIGFGCKGTTTFV*DNNSAITLIKGSGAHCRTKHIGVRWHGIRLWIWEGVLALKYVQTGDQLADIITK 1381
E APV + +++R + +L E D + MD A+LN ++EE+++ LPP F R ++ +L+K LY LKQ+ R L +G +R + ++ D G ++V+VYVD+L+I + E V + K ++ G+F M G+E+ RDRP+ T++ISQ +Y ++L+R+G +C+ P P+E V + +S Y+ V SLMY GT PD+ + V +++ P E KR+ Y+ D+G++F G N +E F+DADWA+D + S T +V L I+ S KQ SSTEA+Y+ A A KE ++LR + +GF T DN SAITL+K S H RTKHI VR+H IR + + + L Y+ T DQ+AD +TK
Sbjct: 287 EMFAPVVKFTSIRTLLALTTELDLEIHQMDVKTAFLNRDLKEEIYMNLPPGF----RKPGVIWKLKKGLYGLKQASREWYKKLCTEFESMGFRRCNSNHAVFIKDDNG--IRVVVAVYVDDLLIFSSSIEAVKKVKKDLKGKFEMTDLGEAHWILGMEITRDRPSHTLSISQKAYFAEILERFGMSDCKPAPTPMEVGVSLRKLSEAEVDSQHYQSAVGSLMYGMIGTHPDVAHSVGVLSQHCATPGEEHEKGNKRVLRYIKGTTDLGLVFIGSGNTK-IEVFIDADWAQDKNNRHSLTGYVCTLAGATISWSSKKQSSTAQSSTEAEYMAATHAAKEALWLRMFMRELGFEQDSPTPLYVDNQSAITLVKNSEFHSRTKHINVRYHFIRENVEDEQIELVYIPTEDQVADALTK 694
BLAST of mRNA_H-paniculata_contig19162.4810.1 vs. uniprot
Match: W7TJ26_9STRA (Gag-pol polyprotein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJ26_9STRA) HSP 1 Score: 244 bits (624), Expect = 6.290e-70 Identity = 153/421 (36.34%), Postives = 234/421 (55.58%), Query Frame = 2
Query: 170 TSAPVARMSTLRIVFSLAAEHDFKFEAMDADAAYLNAPVEEELFVTLPPEFSPFSRDI-PLVRRLRKSLYSLKQSGRNRNNTLDDFLLGIGIQRSTTIPCLYFSRDEGGETDILVSVYVDNLIIA*R-REKVHEFKDEISGRFRMK---------GLEVRRDRPNGTINISQGSYTRKVLKRYGSDECRGVPPPVEGKV-KISAPERRSGNSTEYRGMV*SLMYTPTGTRPDLEYVVHQVARCMEDPYREDFSTCKRMFHYLSTVPDVGIMFGGKSN-DHGLEEFVDADWAEDIED*KSTTPHVFKLNSG----AINLCSSKQQLVTSSSTEADYITAGEAGKETVYLRELLGSIGFGCKGTTTFV*DNNSAITLIKGSGAHCRTKHIGVRWHGIRLWIWEGVLALKYVQTGDQLADIITK 1381
T APVA M+T+R+V +LA D + + MD D AYL + +EE++++ PP + + + LV RLRKSLY LKQSGRN + +D + G G+ S PCLY GE ++V +YVD+LII R +FK +IS F MK G+ ++R+R N T+ ISQ Y +L ++G +C+ V P+EG + K+ + + N EY +V SL+Y TRPD+ + V + + ++ +E + KR+ YL DVG+ + G S L + DAD+A D ++ +ST+ + F L+ G I+ + +Q +V SS E++ I+A A + VY+R+LL +GF T + DN + I + H RTKHI VR+H +R + + L Y+ T QLADI+TK
Sbjct: 277 TYAPVASMTTIRLVLALACILDLELDNMDVDTAYLQSDLEEKVYIKQPPGYEKYGPNGGELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGLHPSYADPCLYVKFASSGEILVIV-LYVDDLIIGSNSRTMTDKFKQDISREFSMKDLKELDWILGMGIKRNRENRTMEISQTGYIGMMLNKFGMADCKSVLTPMEGTLTKMDGKDVKPDN--EYMKLVGSLLYAALVTRPDIAFAVQSLGKHLQGSNKEHWIAAKRVLRYLKGTRDVGLKYTGNSTGSFTLVGYADADYAGDKDNRRSTSGYTFTLSHGDDVNTIDWKAKQQDVVALSSAESELISACSATQNAVYIRQLLMDLGFKQDEPTVIMEDNQACIAMGNNPITHKRTKHIDVRYHFVREKVESKEVELVYIPTQHQLADILTK 694
BLAST of mRNA_H-paniculata_contig19162.4810.1 vs. uniprot
Match: W7TIM1_9STRA (Gag-pol polyprotein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TIM1_9STRA) HSP 1 Score: 241 bits (615), Expect = 4.490e-67 Identity = 152/421 (36.10%), Postives = 233/421 (55.34%), Query Frame = 2
Query: 170 TSAPVARMSTLRIVFSLAAEHDFKFEAMDADAAYLNAPVEEELFVTLPPEFSPFSRD-IPLVRRLRKSLYSLKQSGRNRNNTLDDFLLGIGIQRSTTIPCLYFSRDEGGETDILVSVYVDNLIIA*R-REKVHEFKDEISGRFRMK---------GLEVRRDRPNGTINISQGSYTRKVLKRYGSDECRGVPPPVEGKV-KISAPERRSGNSTEYRGMV*SLMYTPTGTRPDLEYVVHQVARCMEDPYREDFSTCKRMFHYLSTVPDVGIMF-GGKSNDHGLEEFVDADWAEDIED*KSTTPHVFKLNSG----AINLCSSKQQLVTSSSTEADYITAGEAGKETVYLRELLGSIGFGCKGTTTFV*DNNSAITLIKGSGAHCRTKHIGVRWHGIRLWIWEGVLALKYVQTGDQLADIITK 1381
T APVA ++T+R++ ++A D + + MD + AYL + +EE+++V P + + + LV RLRKSLY LKQSGRN + +D + G G S+ PCLY GE ++V +YVD+LII RE V +FK IS F MK G+ ++R+R + ISQ +Y VL ++G +CR V P+EG + K+ + + N EY +V SL+Y TRPD+ + V + + ++ E + KR+ YL DVGI + G + L F DAD+A D ++ +ST+ + F L+ G I+ + +Q++V SS E++ I+A A + VY+R+LL +GF T V DN + I + H +TKHI VR+H +R + + L Y+ T QLADI+TK
Sbjct: 286 TYAPVASITTIRLILAIACILDLELDNMDVETAYLQSDLEEKVYVKQPIGYEQYGLNGEELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHPSSADPCLYVKFGSSGEMLVIV-LYVDDLIITSNSREMVDKFKQAISREFSMKDLKELDWILGMAIKRNREKRVMEISQTAYIDMVLNKFGMADCRPVLTPMEGTLTKMDGKDAKPDN--EYMKLVGSLLYAALVTRPDIAFAVQSLGKHLQGSNEEHWIAAKRVLRYLKGTRDVGIRYTGNTTGSFTLVGFADADYAGDKDNRRSTSGYAFTLSHGDDINTIDWKAKQQEVVALSSAESELISACSATQSAVYIRQLLTDLGFKQDEPTVIVEDNQACIAMGNNPITHKKTKHIDVRYHFVREKVESKEVELVYIPTQHQLADILTK 703
BLAST of mRNA_H-paniculata_contig19162.4810.1 vs. uniprot
Match: A0A5S6QJX2_TRIMR (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Trichuris muris TaxID=70415 RepID=A0A5S6QJX2_TRIMR) HSP 1 Score: 231 bits (589), Expect = 6.830e-67 Identity = 149/417 (35.73%), Postives = 222/417 (53.24%), Query Frame = 2
Query: 167 ETSAPVARMSTLRIVFSLAAEHDFKFEAMDADAAYLNAPVEEELFVTLPPEFSPFSRDIPLVRRLRKSLYSLKQSGRNRNNTLDDFLLGIGIQRSTTIPCLYFSRDEGGETDILVSVYVDNLIIA*RR-EKVHEFKDEISGRFRMK---------GLEVRRDRPNGTINISQGSYTRKVLKRYGSDECRGVPPPVEGKVKISAPER--RSGNSTEYRGMV*SLMYTPTGTRPDLEYVVHQVARCMEDPYREDFSTCKRMFHYLSTVPDVGIMFGGKSNDHGLEEFVDADWAEDIED*KSTTPHVFKLNSGAINLCSSKQQLVTSSSTEADYITAGEAGKETVYLRELLGSIGFGCKGTTTFV*DNNSAITLIKGSGAHCRTKHIGVRWHGIRLWIWEGVLALKYVQTGDQLADIITK 1381
+T APV R T+RI+F++ A + +D AYLN ++EELF+ PP FS + V RLR+SLY LKQS R N D L +G + + PCL FSR E T V +YVD+L+IA E + +++ F +K G++V R+ +G+ + Q + R +LK +G + + V P+E S E + ++ EYR + SL+Y T TRPD+ + V Q+ RCME P + D+ KR+ YL+ P + F + L FVDADWA D D KST+ + FK+ + + S KQ V SSTEA+YI A EA ++ +++R++L IG T DN I + + RTKHI +R+H +R G++AL Y + + AD++TK
Sbjct: 59 KTFAPVVRHETVRILFAVVAMKNMHVRHVDVKTAYLNGKLDEELFLEPPPGFSQPTTG-GKVLRLRRSLYGLKQSARVWNQVATDALQKLGFRPNRADPCL-FSRSEKNNTMSYVLLYVDDLLIAGSSPELTCDVGKQLNSYFEIKDLGEVRQYLGMQVEREE-DGSFLLYQAAKVRHLLKEHGLLDAKPVATPMEANFLSSTEEESPKLPDNAEYRKAIGSLLYLATATRPDISFAVGQLCRCMEHPTQRDWKAVKRVMRYLAGSPYRKLRFSANGSIK-LSGFVDADWAGDQADRKSTSGYAFKVGTSTVAWSSRKQSFVALSSTEAEYIAASEACRDLLWIRQVLEDIGIEQVEPTIVYEDNQGCIKMAQSERHTRRTKHIDIRYHQLRELQESGIIALTYCPSNEMPADMLTK 471
BLAST of mRNA_H-paniculata_contig19162.4810.1 vs. uniprot
Match: A0A0V0IN51_SOLCH (Putative ovule protein n=1 Tax=Solanum chacoense TaxID=4108 RepID=A0A0V0IN51_SOLCH) HSP 1 Score: 230 bits (586), Expect = 2.460e-66 Identity = 147/417 (35.25%), Postives = 228/417 (54.68%), Query Frame = 2
Query: 167 ETSAPVARMSTLRIVFSLAAEHDFKFEAMDADAAYLNAPVEEELFVTLPPEFSPFSRDIPLVRRLRKSLYSLKQSGRNRNNTLDDFLLGIGIQRSTTIPCLYFSRDEGGETDILVSVYVDNLIIA*-RREKVHEFKDEISGRFRMK---------GLEVRRDRPNGTINISQGSYTRKVLKRYGSDECRGVPPPVEGKVKISAPERR-SGNSTEYRGMV*SLMYTPTGTRPDLEYVVHQVARCMEDPYREDFSTCKRMFHYLSTVPDVGIMFGGKSNDHG-LEEFVDADWAEDIED*KSTTPHVFKLNSGAINLCSSKQQLVTSSSTEADYITAGEAGKETVYLRELLGSIGFGCKGTTTFV*DNNSAITLIKGSGAHCRTKHIGVRWHGIRLWIWEGVLALKYVQTGDQLADIITK 1381
+T APVAR T+R++F+LAA+ ++K +D +A+LN ++EE++V P F + V RL K+LY LKQ+ R + +DD L+ G +RS LY + +GG+ +VS+YVD+L++ + V++F E+ +F M G+E+ + I ISQ Y +LKR+ + C+ VP P+ KIS E + T YR ++ SL+Y T TRPDL + ++R M+ P + KR Y+ D GI F K + G L + D+DWA ++D KST+ + F L SG + S KQ++V SS EA+YI A A + ++LR++L + T DN SAI++ K H R+KHI V++H IR +G + L + + Q+ADI+TK
Sbjct: 38 DTFAPVARHDTIRLLFALAAQSNWKLYHLDVKSAFLNGLLQEEIYVDQPEGFQVAGME-DKVYRLHKALYGLKQAPRAWYSKIDDHLIHCGFKRSENEATLYVKKAKGGDV-FVVSLYVDDLLVTGSNKAMVNQFMQEMETKFEMSDLGEMSYFLGMEIHQ--VTAGIFISQRKYAWDILKRFKMERCKSVPTPLVHNEKISKFEGGYRADPTVYRSLIGSLLYL-TATRPDLMFTTSLLSRFMQAPSQVHLGVAKRTLRYIKGTADYGIWF--KREEQGQLMGYSDSDWAGSVDDMKSTSGYAFTLGSGMFSWNSKKQEVVAQSSAEAEYIAAAGATNQALWLRKILRDLEQNDIEATVIKVDNKSAISMAKNPVQHGRSKHINVKFHAIRQAKKDGEVQLVHCSSDQQIADIMTK 447
BLAST of mRNA_H-paniculata_contig19162.4810.1 vs. uniprot
Match: A0A5S6QN85_TRIMR (Integrase catalytic domain-containing protein n=2 Tax=Trichuris muris TaxID=70415 RepID=A0A5S6QN85_TRIMR) HSP 1 Score: 237 bits (604), Expect = 4.550e-66 Identity = 151/417 (36.21%), Postives = 225/417 (53.96%), Query Frame = 2
Query: 167 ETSAPVARMSTLRIVFSLAAEHDFKFEAMDADAAYLNAPVEEELFVTLPPEFSPFSRDIPLVRRLRKSLYSLKQSGRNRNNTLDDFLLGIGIQRSTTIPCLYFSRDEGGETDILVSVYVDNLIIA*RR-EKVHEFKDEISGRFRMK---------GLEVRRDRPNGTINISQGSYTRKVLKRYGSDECRGVPPPVEGKVKISAPER--RSGNSTEYRGMV*SLMYTPTGTRPDLEYVVHQVARCMEDPYREDFSTCKRMFHYLSTVPDVGIMFGGKSNDHGLEEFVDADWAEDIED*KSTTPHVFKLNSGAINLCSSKQQLVTSSSTEADYITAGEAGKETVYLRELLGSIGFGCKGTTTFV*DNNSAITLIKGSGAHCRTKHIGVRWHGIRLWIWEGVLALKYVQTGDQLADIITK 1381
ET APV R T+RI+F++AA + +D AYLN ++EELF+ PP FS + D V RLR+SLY LKQS R N D L +G + + PCL FSR+E T V +YVD+L+IA E + +++ F +K G++V R+ +G+ + Q + R +LK +G + + V P+E S E + ++ EYR + SL+Y T TRPD+ + V Q+ RCME P + D+ KR+ YL+ P + F + L FVDADWA D D KST+ + FK+ + + S KQ V SSTEA+Y+ A EA ++ +++R++L IG T DN I + + RTKHI +R+H +R G++AL Y + + AD++TK
Sbjct: 439 ETFAPVVRHETVRILFAVAAMKNMHVRHVDVKTAYLNGKLDEELFLEPPPGFSQPTTD-GKVLRLRRSLYGLKQSARVWNQVATDALQKLGFRPNRADPCL-FSRNEKNNTMSYVLLYVDDLLIAGSSPELTCDVGKQLNSYFEIKDLGEVRQYLGMQVEREE-DGSFLLYQAAKVRHLLKEHGLLDAKPVATPMEANFLSSTEEESPKLPDNAEYRKAIGSLLYLATATRPDISFAVGQLCRCMEHPTQRDWKAVKRVMRYLAGSPYRKLRFSANGSIK-LSGFVDADWAGDHADRKSTSGYAFKVGTSTVAWSSRKQSFVALSSTEAEYVAASEACRDLLWIRQVLEDIGIKQVEPTIVYEDNQGCIKMAQSERHTRRTKHIDIRYHQLRELQESGIIALTYCPSNEMPADMLTK 851
BLAST of mRNA_H-paniculata_contig19162.4810.1 vs. uniprot
Match: W7T174_9STRA (Gag-pol polyprotein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T174_9STRA) HSP 1 Score: 238 bits (608), Expect = 5.060e-66 Identity = 151/422 (35.78%), Postives = 232/422 (54.98%), Query Frame = 2
Query: 167 ETSAPVARMSTLRIVFSLAAEHDFKFEAMDADAAYLNAPVEEELFVTLPPEFSPFSRDI-PLVRRLRKSLYSLKQSGRNRNNTLDDFLLGIGIQRSTTIPCLYFSRDEGGETDILVSVYVDNLIIA*R-REKVHEFKDEISGRFRMK---------GLEVRRDRPNGTINISQGSYTRKVLKRYGSDECRGVPPPVEGKV-KISAPERRSGNSTEYRGMV*SLMYTPTGTRPDLEYVVHQVARCMEDPYREDFSTCKRMFHYLSTVPDVGIMF-GGKSNDHGLEEFVDADWAEDIED*KSTTPHVFKLNSG----AINLCSSKQQLVTSSSTEADYITAGEAGKETVYLRELLGSIGFGCKGTTTFV*DNNSAITLIKGSGAHCRTKHIGVRWHGIRLWIWEGVLALKYVQTGDQLADIITK 1381
+T APVA M+T+R+V +LA D + + MD D AYL + +EE++++ P + + + LV RLRKSLY LKQSGRN + +D + G G S+ PCLY GE ++V +YVD+LIIA R +FK IS F MK G+ ++R+R + ISQ Y +L ++G +C+ V P+EG + K+ + + +EY +V SL+Y TRPD+ + V + + ++ E + KR+ YL DVGI + G + L F DAD+A D ++ +ST+ + F L+ G I+ + +Q++V SS E++ I+A A + VY+R+LL +GF T + DN + I + H RTKHI VR+H +R + + L Y+ T QLADI+TK
Sbjct: 574 QTYAPVASMTTIRLVLALACILDLELDNMDVDTAYLQSDLEEKVYIKQPHGYEKYGPNGGELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHPSSADPCLYVKFGSSGEM-LVVVLYVDDLIIASNSRTMADKFKQAISREFSMKDLKELDWILGMAIKRNREKRIMEISQTGYIDMMLNKFGMTDCKPVLTPMEGTLTKMDGKDVKP--DSEYMKLVGSLLYAALVTRPDIAFAVQSLGKHLQGSNEEHWIAAKRVLRYLKGTRDVGIRYTGNTTGSFTLVGFADADYAGDKDNRRSTSGYAFTLSHGDDINTIDWKAKQQEVVALSSAESELISACSATQSAVYIRQLLTDLGFKQDEPTVIMEDNQACIAMGNNPITHKRTKHIDVRYHFVREKVESKEVELVYIPTQHQLADILTK 992
BLAST of mRNA_H-paniculata_contig19162.4810.1 vs. uniprot
Match: A0A1M2VSW8_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2VSW8_TRAPU) HSP 1 Score: 227 bits (579), Expect = 6.380e-66 Identity = 138/426 (32.39%), Postives = 235/426 (55.16%), Query Frame = 2
Query: 155 VKIFETSAPVARMSTLRIVFSLAAEHDFKFEAMDADAAYLNAPVEEELFVTLPPEFSPFSRDIPLVRRLRKSLYSLKQSGRNRNNTLDDFLLGIGIQRSTTIPCLYFSRDEGGETDILVSVYVDNLIIA*RREKV-HEFKDEISGRFRMK---------GLEVRRDRPNGTINISQGSYTRKVLKRYGSDECRGVPPPVEGKVKIS---APERRSG----NSTEYRGMV*SLMYTPTGTRPDLEYVVHQVARCMEDPYREDFSTCKRMFHYLSTVPDVGIMFGGKSNDHGLEEFVDADWAEDIED*KSTTPHVFKLNSGAINLCSSKQQLVTSSSTEADYITAGEAGKETVYLRELLGSIGFGCKGTTTFV*DNNSAITLIKGSGAHCRTKHIGVRWHGIRLWIWEGVLALKYVQTGDQLADIITK 1381
V +ET APVA++++ R++ ++AA + + E D ++AYLN+ ++EE+++ PP+ F+ V +L K+LY LKQ GR TL L +G R+ ++F RD G ++++++VD+ +I ++ E+K +++ ++++ G++V RD T+ +SQ +Y ++ R+ D+ + + P++ ++S PE + Y+ + SLMY GTRPD+ + V +A+ ++P + KR+F YL + +++GG GLE +VDAD A E ++ T +VF ++ GAI+ S KQ+LVT S+ E++Y+ A A KE ++LR L+G + TT D+ SAI L H RTKHI +R+H IR I G + L Y T D AD++TK
Sbjct: 4 VDYYETFAPVAKLASFRLILAIAARNGWSAETFDFNSAYLNSKLDEEVYLEQPPDHE-FADRRKYVLKLLKALYGLKQGGRKWYETLSAALADLGFTRAEADYGVFFKRD--GTHLVILAIHVDDCLITGSSTRLLAEYKRQLAAKYKLTDLGPVSWLLGIKVSRDLSAHTLALSQHAYIEAIITRFNFDDLKPISTPMDPTSQLSKSQCPESAADVARMRRVPYKEAIGSLMYAAMGTRPDIAFAVSTLAQFSQNPGWVHWEAVKRVFRYLLGTKTLSLIYGG--GQRGLEGYVDADGASQ-EHRRAITGYVFLVDGGAISWSSKKQELVTLSTAESEYVAATHAAKEAIWLRRLIGEVFRPLSEPTTLHSDSQSAIALTVDGSYHARTKHIDIRYHFIRYSIDAGSIRLLYCPTADMTADVLTK 423
BLAST of mRNA_H-paniculata_contig19162.4810.1 vs. uniprot
Match: A0A4Y9ZVS1_9AGAM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Hericium alpestre TaxID=135208 RepID=A0A4Y9ZVS1_9AGAM) HSP 1 Score: 229 bits (584), Expect = 1.570e-65 Identity = 146/422 (34.60%), Postives = 222/422 (52.61%), Query Frame = 2
Query: 167 ETSAPVARMSTLRIVFSLAAEHDFKFEAMDADAAYLNAPVEEELFVTLPPEFSPFSRDIPLVRRLRKSLYSLKQSGRNRNNTLDDFLLGIGIQRSTTIPCLYFSRDEGGETDILVSVYVDNLIIA*RR-EKVHEFKDEISGRFRMK---------GLEVRRDRPNGTINISQGSYTRKVLKRYGSDECRGVPPPVEGKVKISAPERRSG-------NSTEYRGMV*SLMYTPTGTRPDLEYVVHQVARCMEDPYREDFSTCKRMFHYLSTVPDVGIMFGGKSNDHGLEEFVDADWAEDIED*KSTTPHVFKLNSGAINLCSSKQQLVTSSSTEADYITAGEAGKETVYLRELLGSIGFGCKGTTTFV*DNNSAITLIKGSGAHCRTKHIGVRWHGIRLWIWEGVLALKYVQTGDQLADIITK 1381
+T APVA++S++RI+ +LAA D++ MD AYLN +EEE+F+ PP F P V L K +Y LKQ+GR L L +G RS+ ++F GE I V+V VD+L IA +++ K + +F M GLE++RDR TI++ Q +Y +L R+ + + + ++ ++ + S + YR + SLMY GTRPD+ Y V +++ M++P + KR+ YL + + +GG N +G+E F DADW + +S + +VF ++ GA++ S KQ +V SSTEA+Y+ A KE ++ R LG I TT DN SAITL K + H RTKHI +R+H IR + G + + Y T D AD++TK
Sbjct: 112 DTFAPVAKLSSIRILAALAARFDWELHQMDVKNAYLNGDLEEEIFMKQPPGF-PTPGQEQKVCHLFKPIYGLKQAGRRWYKKLCAAFLDMGFARSSVDHSVFFRHGPNGEIAI-VAVSVDDLAIAANSVDEMSHIKSALKLKFEMTDLGEIHWLLGLEIKRDRRGRTISMLQRAYIDTILSRFNLQDAKSLTTAIDPSFSLTTDQSPSTPQQYDDMRNILYREAIGSLMYAAIGTRPDVSYAVTALSQFMQNPGHPHWEAAKRVMRYLKGTKEEWLTYGG-DNANGMEGFSDADWGSS-DHRRSISGYVFLIDGGAVSWSSKKQPIVALSSTEAEYVAMTHAAKEVLWTRAFLGEIISPFDKPTTLYADNQSAITLAKDNLYHARTKHIAIRFHFIRDIVERGEVDIVYCPTADMAADVLTK 529
BLAST of mRNA_H-paniculata_contig19162.4810.1 vs. uniprot
Match: A0A8D8HJI9_CULPI (Copia protein n=1 Tax=Culex pipiens TaxID=7175 RepID=A0A8D8HJI9_CULPI) HSP 1 Score: 228 bits (581), Expect = 1.820e-65 Identity = 140/415 (33.73%), Postives = 220/415 (53.01%), Query Frame = 2
Query: 167 ETSAPVARMSTLRIVFSLAAEHDFKFEAMDADAAYLNAPVEEELFVTLPPEFSPFSRDIPLVRRLRKSLYSLKQSGRNRNNTLDDFLLGIGIQRSTTIPCLYFSRDEGGETDILVSVYVDNLIIA*RREK-VHEFKDEISGRFRMK---------GLEVRRDRPNGTINISQGSYTRKVLKRYGSDECRGVPPPVEGKVKISAPERRSGNSTEYRGMV*SLMYTPTGTRPDLEYVVHQVARCMEDPYREDFSTCKRMFHYLSTVPDVGIMFGGKSNDHGLEEFVDADWAEDIED*KSTTPHVFKLNSGAINLCSSKQQLVTSSSTEADYITAGEAGKETVYLRELLGSIGFGCKGTTTFV*DNNSAITLIKGSGAHCRTKHIGVRWHGIRLWIWEGVLALKYVQTGDQLADIITK 1381
ET +PVA+M+TLRI+ +LA + MD A+LN ++E++++ PP F R LV +L +S+Y LKQS RN N DD++ +G +RS CLY + +G T +L+ YVD+++IA K + K ++S F MK GL + RDR G++ I Q +YT VLKR+G + C+ P P++ ++K+ + + Y+ +V LMY +RPD+ V+ A E + KR+ YL D +++ + G+E F DADW D D KS + V KL+ +N + KQ V SSTEA+ ++ +A E +++ LL SI + T DN I++ R KHI V++ ++ I G L L+Y+ T +Q+AD++TK
Sbjct: 85 ETYSPVAKMATLRILLALANHEGWHLHQMDVKCAFLNGSLDEDIYMCQPPGFE---RGKDLVCKLNRSIYGLKQSSRNWNRRFDDYVTKLGFKRSQHDLCLYHWKADGVVTYMLI--YVDDILIAGNDLKAIRALKGKLSTEFEMKDMEEAKIFLGLRIDRDRKAGSMTIDQKAYTLGVLKRFGMENCKSSPVPMQPRLKLERGDPKELTEKPYKELVGCLMYLTVTSRPDICPAVNYFASFQSSATEEHWVHLKRVLRYLQGTLDYKLIYQRMDSAVGVEAFADADWGNDPTDRKSVSGFVLKLHGQTVNWSTRKQTSVALSSTEAELMSLCQASCEVMWMLNLLASIEYEVPHPVTVYEDNQPCISVTADPRKLKRMKHIDVQYRFVKELIDNGKLRLEYLSTEEQVADLMTK 494 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig19162.4810.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig19162.4810.1 >prot_H-paniculata_contig19162.4810.1 ID=prot_H-paniculata_contig19162.4810.1|Name=mRNA_H-paniculata_contig19162.4810.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=118bp MSTLRIVFSLAAEHDFKFEAMDADAAYLNAPVEEELFVTLPPEFSPFSRDback to top mRNA from alignment at H-paniculata_contig19162:1689..3177+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig19162.4810.1 ID=mRNA_H-paniculata_contig19162.4810.1|Name=mRNA_H-paniculata_contig19162.4810.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1489bp|location=Sequence derived from alignment at H-paniculata_contig19162:1689..3177+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig19162:1689..3177+ >mRNA_H-paniculata_contig19162.4810.1 ID=mRNA_H-paniculata_contig19162.4810.1|Name=mRNA_H-paniculata_contig19162.4810.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=708bp|location=Sequence derived from alignment at H-paniculata_contig19162:1689..3177+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |