prot_H-paniculata_contig19139.4802.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig19139.4802.1
Unique Nameprot_H-paniculata_contig19139.4802.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length177
Homology
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BLAST of mRNA_H-paniculata_contig19139.4802.1 vs. uniprot
Match: D8LSZ5_ECTSI (Glycosyltransferase, family GT64 n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSZ5_ECTSI)

HSP 1 Score: 180 bits (456), Expect = 5.490e-51
Identity = 98/176 (55.68%), Postives = 113/176 (64.20%), Query Frame = 0 
Query:    2 AITSVSGTAPVATFAPVEDIGLLGGISTGEGSGKWWQAPHAVKRSGCLADLNEIFCAHTHHHAPTTRFPPSGDGELQXXXXXXXXTSATCEILRRTSLFASVAALPRRRSFAQVQGRGRGNGLDKE---TVDDLARISRWALAVRAPTLAEFISADMLLVPGKTWRWLTKEDVLGR 174
            A+TSVSG  PVA FAPV D+GL GGIS GEGSGKWWQAPHA KRS CLADL EIFC       P    PP  D + Q         +  CE L RT LFAS    PR  +   ++G  RG G D +   +  DL+R+SRW LAVRAPTLAEF+SADMLLVP K W+W  K+D+ GR
Sbjct:  347 AVTSVSGLPPVAAFAPVVDVGLFGGISIGEGSGKWWQAPHAKKRSRCLADLREIFCDVADE--PLLPPPPFPDNKEQGATDRRRPRTRRCEPLIRTDLFAST---PRATATPSIRGGVRGRGGDGDGNSSRSDLSRLSRWGLAVRAPTLAEFVSADMLLVPAKLWKWFAKDDIRGR 517
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig19139.4802.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D8LSZ5_ECTSI5.490e-5155.68Glycosyltransferase, family GT64 n=2 Tax=Ectocarpu... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig19139contigH-paniculata_contig19139:398..3646 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig19139.4802.1mRNA_H-paniculata_contig19139.4802.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig19139 398..3646 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig19139.4802.1 ID=prot_H-paniculata_contig19139.4802.1|Name=mRNA_H-paniculata_contig19139.4802.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=177bp
QAITSVSGTAPVATFAPVEDIGLLGGISTGEGSGKWWQAPHAVKRSGCLA
DLNEIFCAHTHHHAPTTRFPPSGDGELQQQQQQRPPTSATCEILRRTSLF
ASVAALPRRRSFAQVQGRGRGNGLDKETVDDLARISRWALAVRAPTLAEF
ISADMLLVPGKTWRWLTKEDVLGREI*
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