prot_H-paniculata_contig19121.4797.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig19121.4797.1
Unique Nameprot_H-paniculata_contig19121.4797.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length164
Homology
BLAST of mRNA_H-paniculata_contig19121.4797.1 vs. uniprot
Match: A0A8I6TLX8_CIMLE (Integrase catalytic domain-containing protein n=1 Tax=Cimex lectularius TaxID=79782 RepID=A0A8I6TLX8_CIMLE)

HSP 1 Score: 90.5 bits (223), Expect = 4.580e-18
Identity = 48/124 (38.71%), Postives = 79/124 (63.71%), Query Frame = 0
Query:    1 MHGLVQAGCCWSIKITEDLKTLGFKQSRADPCVFRKIIDGGMRVIGVIHVDDFLITTKGPVIMEQLLTGLQSKYTIKDLCEDKYYLGCHITRDRLRKELKVDQHLNAQKIAERFGIVQTNMFLT 124
            M+GL Q+G CW+ ++   +  LG +QS+ADPC++ K+I  GM VI + +VDD LI +    +   +   L++++++K+L E K  LG +ITRDR   +L ++Q    +KI E+FG+ + N  LT
Sbjct:  507 MYGLKQSGRCWNQRLHTVMTGLGLQQSKADPCIYFKVIPDGMIVIAI-YVDDLLIFSNQCDLQTCVTQKLENEFSMKNLGEVKDCLGMNITRDRKLGKLWINQTTYIKKIIEKFGMSEANPVLT 629          
BLAST of mRNA_H-paniculata_contig19121.4797.1 vs. uniprot
Match: A0A8J4AXG8_9CHLO (Uncharacterized protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4AXG8_9CHLO)

HSP 1 Score: 86.3 bits (212), Expect = 1.440e-16
Identity = 50/143 (34.97%), Postives = 81/143 (56.64%), Query Frame = 0
Query:    1 MHGLVQAGCCWSIKITEDLKTLGFKQSRADPCVFRKIIDGGMRVIGVIHVDDFLITTKGPVIMEQLLTGLQSKYTIKDLCEDKYYLGCHITRDRLRKELKVDQHLNAQKIAERFGIVQTN-MFLTTAGGEPLSKEDGPRTQEE 142
            ++GL QA   W   + E L ++GF+ S ADP +F K + G  RV  +++VDD LI +  P ++ Q    L S ++++DL E + +LG  I R+R+   LK+ Q   A+K+ E+FG+V +N   +  + G  L  E  P   +E
Sbjct: 1138 LYGLKQAPRAWYGCLKEQLISMGFQVSDADPGLFYKDVLGD-RVYVLVYVDDLLIASSNPEVIRQFKAKLMSIFSVRDLGEARVFLGYEIERNRMEGTLKLSQQQFARKVVEKFGLVGSNPRLIPMSSGTVLRGEGSPLNVQE 1279          
BLAST of mRNA_H-paniculata_contig19121.4797.1 vs. uniprot
Match: A0A6H5JLP8_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLP8_9PHAE)

HSP 1 Score: 84.0 bits (206), Expect = 8.320e-16
Identity = 49/142 (34.51%), Postives = 76/142 (53.52%), Query Frame = 0
Query:    1 MHGLVQAGCCWSIKITEDLKTLGFKQSRADPCVFRKIIDGGMRVIGVIHVDDFLITTKGPVIMEQLLTGLQSKYTIKDLCEDKYYLGCHITRDRLRKELKVDQHLNAQKIAERFGIVQTNMFLTTAGGEPLSKEDGPRTQEE 142
            +HGL Q+G  W     + L   GF+Q +ADPCVFRK++D  + +I VI+V+D L+        E+LL  L  K+  K+L E +++ GC I RD     L++ Q      + ERF +  T+    T G +      GP+ ++E
Sbjct:  464 IHGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVEDILVAGSDEDC-EELLASLNKKFPTKNLGECQWFDGCAIERDVDAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADL-----GPKREDE 599          
BLAST of mRNA_H-paniculata_contig19121.4797.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE)

HSP 1 Score: 83.6 bits (205), Expect = 1.230e-15
Identity = 49/142 (34.51%), Postives = 76/142 (53.52%), Query Frame = 0
Query:    1 MHGLVQAGCCWSIKITEDLKTLGFKQSRADPCVFRKIIDGGMRVIGVIHVDDFLITTKGPVIMEQLLTGLQSKYTIKDLCEDKYYLGCHITRDRLRKELKVDQHLNAQKIAERFGIVQTNMFLTTAGGEPLSKEDGPRTQEE 142
            ++GL Q+G  W     + L   GF+Q +ADPCVFRK++D  + +I VI+VDD L+        E+LL  L  K+  K+L E +++ GC I RD     L++ Q      + ERF +  T+    T G +      GP+ ++E
Sbjct:  885 IYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDC-EELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADL-----GPKREDE 1020          
BLAST of mRNA_H-paniculata_contig19121.4797.1 vs. uniprot
Match: A0A6H5JQW4_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQW4_9PHAE)

HSP 1 Score: 83.6 bits (205), Expect = 1.240e-15
Identity = 49/142 (34.51%), Postives = 76/142 (53.52%), Query Frame = 0
Query:    1 MHGLVQAGCCWSIKITEDLKTLGFKQSRADPCVFRKIIDGGMRVIGVIHVDDFLITTKGPVIMEQLLTGLQSKYTIKDLCEDKYYLGCHITRDRLRKELKVDQHLNAQKIAERFGIVQTNMFLTTAGGEPLSKEDGPRTQEE 142
            ++GL Q+G  W     + L   GF+Q +ADPCVFRK++D  + +I VI+VDD L+        E+LL  L  K+  K+L E +++ GC I RD     L++ Q      + ERF +  T+    T G +      GP+ ++E
Sbjct:  994 IYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDC-EELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADL-----GPKREDE 1129          
BLAST of mRNA_H-paniculata_contig19121.4797.1 vs. uniprot
Match: A0A6H5JZQ8_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JZQ8_9PHAE)

HSP 1 Score: 83.6 bits (205), Expect = 1.260e-15
Identity = 49/142 (34.51%), Postives = 76/142 (53.52%), Query Frame = 0
Query:    1 MHGLVQAGCCWSIKITEDLKTLGFKQSRADPCVFRKIIDGGMRVIGVIHVDDFLITTKGPVIMEQLLTGLQSKYTIKDLCEDKYYLGCHITRDRLRKELKVDQHLNAQKIAERFGIVQTNMFLTTAGGEPLSKEDGPRTQEE 142
            ++GL Q+G  W     + L   GF+Q +ADPCVFRK++D  + +I VI+VDD L+        E+LL  L  K+  K+L E +++ GC I RD     L++ Q      + ERF +  T+    T G +      GP+ ++E
Sbjct: 1264 IYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDC-EELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADL-----GPKREDE 1399          
BLAST of mRNA_H-paniculata_contig19121.4797.1 vs. uniprot
Match: A0A6H5JN00_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN00_9PHAE)

HSP 1 Score: 83.6 bits (205), Expect = 1.260e-15
Identity = 49/142 (34.51%), Postives = 76/142 (53.52%), Query Frame = 0
Query:    1 MHGLVQAGCCWSIKITEDLKTLGFKQSRADPCVFRKIIDGGMRVIGVIHVDDFLITTKGPVIMEQLLTGLQSKYTIKDLCEDKYYLGCHITRDRLRKELKVDQHLNAQKIAERFGIVQTNMFLTTAGGEPLSKEDGPRTQEE 142
            ++GL Q+G  W     + L   GF+Q +ADPCVFRK++D  + +I VI+VDD L+        E+LL  L  K+  K+L E +++ GC I RD     L++ Q      + ERF +  T+    T G +      GP+ ++E
Sbjct: 1284 IYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDQVVVMIIVIYVDDILVAGSDEDC-EELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADL-----GPKREDE 1419          
BLAST of mRNA_H-paniculata_contig19121.4797.1 vs. uniprot
Match: A0A6H5KF60_9PHAE (Uncharacterized protein n=12 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF60_9PHAE)

HSP 1 Score: 83.6 bits (205), Expect = 1.270e-15
Identity = 49/142 (34.51%), Postives = 76/142 (53.52%), Query Frame = 0
Query:    1 MHGLVQAGCCWSIKITEDLKTLGFKQSRADPCVFRKIIDGGMRVIGVIHVDDFLITTKGPVIMEQLLTGLQSKYTIKDLCEDKYYLGCHITRDRLRKELKVDQHLNAQKIAERFGIVQTNMFLTTAGGEPLSKEDGPRTQEE 142
            ++GL Q+G  W     + L   GF+Q +ADPCVFRK++D  + +I VI+VDD L+        E+LL  L  K+  K+L E +++ GC I RD     L++ Q      + ERF +  T+    T G +      GP+ ++E
Sbjct: 1427 IYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDC-EELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADL-----GPKREDE 1562          
BLAST of mRNA_H-paniculata_contig19121.4797.1 vs. uniprot
Match: A0A6H5K164_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K164_9PHAE)

HSP 1 Score: 83.2 bits (204), Expect = 1.570e-15
Identity = 49/142 (34.51%), Postives = 76/142 (53.52%), Query Frame = 0
Query:    1 MHGLVQAGCCWSIKITEDLKTLGFKQSRADPCVFRKIIDGGMRVIGVIHVDDFLITTKGPVIMEQLLTGLQSKYTIKDLCEDKYYLGCHITRDRLRKELKVDQHLNAQKIAERFGIVQTNMFLTTAGGEPLSKEDGPRTQEE 142
            ++GL Q+G  W     + L   GF+Q +ADPCVFRK++D  + +I VI+VDD L+        E+LL  L  K+  K+L E +++ GC I RD     L++ Q      + ERF +  T+    T G +      GP+ ++E
Sbjct:  520 IYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDC-EELLASLNKKFPTKNLGECQWFDGCAIERDVDAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADL-----GPKREDE 655          
BLAST of mRNA_H-paniculata_contig19121.4797.1 vs. uniprot
Match: A0A6H5JQN6_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQN6_9PHAE)

HSP 1 Score: 82.8 bits (203), Expect = 2.190e-15
Identity = 48/137 (35.04%), Postives = 74/137 (54.01%), Query Frame = 0
Query:    1 MHGLVQAGCCWSIKITEDLKTLGFKQSRADPCVFRKIIDGGMRVIGVIHVDDFLITTKGPVIMEQLLTGLQSKYTIKDLCEDKYYLGCHITRDRLRKELKVDQHLNAQKIAERFGIVQTNMFLTTAGGE--PLSKED 135
            ++GL Q+G  W     + L   GF+Q +ADPCVFRK++D  + +I VI+VDD L+        E+LL  L  K+  K+L E +++ GC I RD     L++ Q      + ERF +  T+    T G +  P  ++D
Sbjct:  476 IYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDC-EELLASLNKKFPTKNLGECQWFDGCAIERDVDAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADLGPKREDD 611          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig19121.4797.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A8I6TLX8_CIMLE4.580e-1838.71Integrase catalytic domain-containing protein n=1 ... [more]
A0A8J4AXG8_9CHLO1.440e-1634.97Uncharacterized protein n=1 Tax=Volvox africanus T... [more]
A0A6H5JLP8_9PHAE8.320e-1634.51Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5KSG8_9PHAE1.230e-1534.51Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JQW4_9PHAE1.240e-1534.51Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5JZQ8_9PHAE1.260e-1534.51Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JN00_9PHAE1.260e-1534.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KF60_9PHAE1.270e-1534.51Uncharacterized protein n=12 Tax=Ectocarpus sp. CC... [more]
A0A6H5K164_9PHAE1.570e-1534.51Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JQN6_9PHAE2.190e-1535.04Reverse transcriptase Ty1/copia-type domain-contai... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013103Reverse transcriptase, RNA-dependent DNA polymerasePFAMPF07727RVT_2coord: 1..122
e-value: 9.4E-17
score: 61.5

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig19121contigH-paniculata_contig19121:1731..2222 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig19121.4797.1mRNA_H-paniculata_contig19121.4797.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig19121 1693..3335 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig19121.4797.1 ID=prot_H-paniculata_contig19121.4797.1|Name=mRNA_H-paniculata_contig19121.4797.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=164bp
MHGLVQAGCCWSIKITEDLKTLGFKQSRADPCVFRKIIDGGMRVIGVIHV
DDFLITTKGPVIMEQLLTGLQSKYTIKDLCEDKYYLGCHITRDRLRKELK
VDQHLNAQKIAERFGIVQTNMFLTTAGGEPLSKEDGPRTQEEVQKTRISC
TGRQWEYSRGRRR*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013103RVT_2