mRNA_H-paniculata_contig19121.4797.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig19121.4797.1 vs. uniprot
Match: A0A8J4AXG8_9CHLO (Uncharacterized protein n=1 Tax=Volvox africanus TaxID=51714 RepID=A0A8J4AXG8_9CHLO) HSP 1 Score: 94.7 bits (234), Expect = 1.570e-16 Identity = 54/155 (34.84%), Postives = 88/155 (56.77%), Query Frame = 3
Query: 3 GVPGSSRETHKTMHGLVQAGCCWSIKITEDLKTLGFKQSRADPCVFRKIIDGGMRVIGVIHVDDFLITTKGPVIMEQLLTGLQSKYTIKDLCEDKYYLGCHITRDRLRKELKVDQHLNAQKIAERFGIVQTN-MFLTTAGGEPLSKEDGPRTQEE 464
G+PG + + K ++GL QA W + E L ++GF+ S ADP +F K + G RV +++VDD LI + P ++ Q L S ++++DL E + +LG I R+R+ LK+ Q A+K+ E+FG+V +N + + G L E P +E
Sbjct: 1126 GIPGMACKLQKALYGLKQAPRAWYGCLKEQLISMGFQVSDADPGLFYKDVLGD-RVYVLVYVDDLLIASSNPEVIRQFKAKLMSIFSVRDLGEARVFLGYEIERNRMEGTLKLSQQQFARKVVEKFGLVGSNPRLIPMSSGTVLRGEGSPLNVQE 1279
BLAST of mRNA_H-paniculata_contig19121.4797.1 vs. uniprot
Match: UPI001E1BC44C (secreted RxLR effector protein 161-like n=1 Tax=Daphnia magna TaxID=35525 RepID=UPI001E1BC44C) HSP 1 Score: 86.7 bits (213), Expect = 1.770e-15 Identity = 43/107 (40.19%), Postives = 66/107 (61.68%), Query Frame = 2
Query: 461 RSPEDSNFLYRETVGVLTWAATMTRSDIAYAVRTVAKICENPGMAHKKAVEKIL*CVLRTADLGITCGGQNSEIKMLAYADSDYAACPDSRRSMSGGTVLLLGGGDL 781
+ P DS F +R +G L + A MTR ++ YA+ V++ CE+PG H +AV++ L + T D G+ GG ++ Y DS++AACPD+RRS SG T+ + GG +
Sbjct: 9 KEPIDSTF-FRGGIGGLLYVARMTRPELMYAITAVSRYCEDPGKPHWEAVKRSLSYLAGTMDYGLCYGGDQLTNTLVTYTDSNFAACPDTRRSTSG-TLFMFNGGPI 113
BLAST of mRNA_H-paniculata_contig19121.4797.1 vs. uniprot
Match: A0A8I6TLX8_CIMLE (Integrase catalytic domain-containing protein n=1 Tax=Cimex lectularius TaxID=79782 RepID=A0A8I6TLX8_CIMLE) HSP 1 Score: 90.9 bits (224), Expect = 2.030e-15 Identity = 48/126 (38.10%), Postives = 80/126 (63.49%), Query Frame = 3
Query: 33 KTMHGLVQAGCCWSIKITEDLKTLGFKQSRADPCVFRKIIDGGMRVIGVIHVDDFLITTKGPVIMEQLLTGLQSKYTIKDLCEDKYYLGCHITRDRLRKELKVDQHLNAQKIAERFGIVQTNMFLT 410
+ M+GL Q+G CW+ ++ + LG +QS+ADPC++ K+I GM VI + +VDD LI + + + L++++++K+L E K LG +ITRDR +L ++Q +KI E+FG+ + N LT
Sbjct: 505 RAMYGLKQSGRCWNQRLHTVMTGLGLQQSKADPCIYFKVIPDGMIVIAI-YVDDLLIFSNQCDLQTCVTQKLENEFSMKNLGEVKDCLGMNITRDRKLGKLWINQTTYIKKIIEKFGMSEANPVLT 629
BLAST of mRNA_H-paniculata_contig19121.4797.1 vs. uniprot
Match: A0A8J2WCA4_9CRUS (Hypothetical protein n=1 Tax=Daphnia galeata TaxID=27404 RepID=A0A8J2WCA4_9CRUS) HSP 1 Score: 86.7 bits (213), Expect = 5.470e-14 Identity = 53/127 (41.73%), Postives = 73/127 (57.48%), Query Frame = 2
Query: 401 VPYNGGRGTTVQGRRTTDPGRSPEDSNFLYRETVGVLTWAATMTRSDIAYAVRTVAKICENPGMAHKKAVEKIL*CVLRTADLGITCGGQNSEIKMLAYADSDYAACPDSRRSMSGGTVLLLGGGDL 781
VP G TV+ TT +S S YR+ VG L +A MTR DIA+AV V++ NPG H +AV++IL + T G+ G + + L Y+DSDYA CPD+RRS +G T+ +L GG +
Sbjct: 1146 VPAEPGSRLTVKDSPTTVTEQSSMSST-PYRQAVGSLMYAMIMTRPDIAFAVGQVSRFSVNPGPVHWEAVKRILSYLAGTPRHGLCFTGTDLSNQFLGYSDSDYAGCPDTRRSTTG-TLFILNGGPI 1270
BLAST of mRNA_H-paniculata_contig19121.4797.1 vs. uniprot
Match: A0A6H5JLP8_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLP8_9PHAE) HSP 1 Score: 84.7 bits (208), Expect = 1.430e-13 Identity = 49/147 (33.33%), Postives = 78/147 (53.06%), Query Frame = 3
Query: 24 ETHKTMHGLVQAGCCWSIKITEDLKTLGFKQSRADPCVFRKIIDGGMRVIGVIHVDDFLITTKGPVIMEQLLTGLQSKYTIKDLCEDKYYLGCHITRDRLRKELKVDQHLNAQKIAERFGIVQTNMFLTTAGGEPLSKEDGPRTQEE 464
+ + +HGL Q+G W + L GF+Q +ADPCVFRK++D + +I VI+V+D L+ E+LL L K+ K+L E +++ GC I RD L++ Q + ERF + T+ T G + GP+ ++E
Sbjct: 459 KAERAIHGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVEDILVAGSDEDC-EELLASLNKKFPTKNLGECQWFDGCAIERDVDAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADL-----GPKREDE 599
BLAST of mRNA_H-paniculata_contig19121.4797.1 vs. uniprot
Match: A0A6H5K164_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K164_9PHAE) HSP 1 Score: 84.3 bits (207), Expect = 2.090e-13 Identity = 54/157 (34.39%), Postives = 82/157 (52.23%), Query Frame = 3
Query: 3 GVPGSSRETHKT---MHGLVQAGCCWSIKITEDLKTLGFKQSRADPCVFRKIIDGGMRVIGVIHVDDFLITTKGPVIMEQLLTGLQSKYTIKDLCEDKYYLGCHITRDRLRKELKVDQHLNAQKIAERFGIVQTNMFLTTAGGEPLSKEDGPRTQEE 464
G SR+T K ++GL Q+G W + L GF+Q +ADPCVFRK++D + +I VI+VDD L+ E+LL L K+ K+L E +++ GC I RD L++ Q + ERF + T+ T G + GP+ ++E
Sbjct: 505 GCGDKSRKTLKAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDC-EELLASLNKKFPTKNLGECQWFDGCAIERDVDAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADL-----GPKREDE 655
BLAST of mRNA_H-paniculata_contig19121.4797.1 vs. uniprot
Match: A0A8B9AG57_PHODC (secreted RxLR effector protein 161-like n=1 Tax=Phoenix dactylifera TaxID=42345 RepID=A0A8B9AG57_PHODC) HSP 1 Score: 78.6 bits (192), Expect = 2.210e-13 Identity = 40/97 (41.24%), Postives = 58/97 (59.79%), Query Frame = 2
Query: 482 FLYRETVGVLTWAATMTRSDIAYAVRTVAKICENPGMAHKKAVEKIL*CVLRTADLGITCGGQNSEIKMLAYADSDYAACPDSRRSMSGGTVLLLGG 772
F Y +G L +A TR DIAY V + + NPGM H +A +K+L RT D +T ++ ++++ Y+DS++A CPDSR+S SG LL GG
Sbjct: 41 FPYVSLIGTLMYAQVRTRPDIAYVVELLERFQANPGMEHWRAAKKVLGYFQRTQDYMLTYN-KSDLLEIVGYSDSEFAGCPDSRKSTSGYIFLLAGG 136
BLAST of mRNA_H-paniculata_contig19121.4797.1 vs. uniprot
Match: A0A6H5KSG8_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSG8_9PHAE) HSP 1 Score: 84.3 bits (207), Expect = 2.800e-13 Identity = 49/147 (33.33%), Postives = 78/147 (53.06%), Query Frame = 3
Query: 24 ETHKTMHGLVQAGCCWSIKITEDLKTLGFKQSRADPCVFRKIIDGGMRVIGVIHVDDFLITTKGPVIMEQLLTGLQSKYTIKDLCEDKYYLGCHITRDRLRKELKVDQHLNAQKIAERFGIVQTNMFLTTAGGEPLSKEDGPRTQEE 464
+ + ++GL Q+G W + L GF+Q +ADPCVFRK++D + +I VI+VDD L+ E+LL L K+ K+L E +++ GC I RD L++ Q + ERF + T+ T G + GP+ ++E
Sbjct: 880 KAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDC-EELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADL-----GPKREDE 1020
BLAST of mRNA_H-paniculata_contig19121.4797.1 vs. uniprot
Match: A0A6H5JQW4_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JQW4_9PHAE) HSP 1 Score: 84.3 bits (207), Expect = 2.810e-13 Identity = 49/147 (33.33%), Postives = 78/147 (53.06%), Query Frame = 3
Query: 24 ETHKTMHGLVQAGCCWSIKITEDLKTLGFKQSRADPCVFRKIIDGGMRVIGVIHVDDFLITTKGPVIMEQLLTGLQSKYTIKDLCEDKYYLGCHITRDRLRKELKVDQHLNAQKIAERFGIVQTNMFLTTAGGEPLSKEDGPRTQEE 464
+ + ++GL Q+G W + L GF+Q +ADPCVFRK++D + +I VI+VDD L+ E+LL L K+ K+L E +++ GC I RD L++ Q + ERF + T+ T G + GP+ ++E
Sbjct: 989 KAERAIYGLKQSGRQWGYHAADTLVENGFEQCKADPCVFRKMVDEVVVMIIVIYVDDILVAGSDEDC-EELLASLNKKFPTKNLGECQWFDGCAIERDVEAGTLRISQTAYIDSMVERFDVKSTSRIPATPGADL-----GPKREDE 1129
BLAST of mRNA_H-paniculata_contig19121.4797.1 vs. uniprot
Match: A0A6H5K8K4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K8K4_9PHAE) HSP 1 Score: 84.3 bits (207), Expect = 2.830e-13 Identity = 49/161 (30.43%), Postives = 81/161 (50.31%), Query Frame = 3
Query: 6 VPGSSRETHKTMHGLVQAGCCWSIKITEDLKTLGFKQSRADPCVFRKIIDGGMRVIGVIHVDDFLITTKGPVIMEQLLTGLQSKYTIKDLCEDKYYLGCHITRDRLRKELKVDQHLNAQKIAERFGIVQTNMFLTTAGGEPLSKEDGPRTQEEVQKTRISC 488
+ G + + + ++GL Q+G W + + L G++Q RADPCVFR+++DG + + VI+VDD L+ ++LL LQ K+ +KDL E +Y G I D K+ Q + I +RF + T G + K D T ++ + + C
Sbjct: 936 MSGKACKVERALYGLKQSGREWGFEAADALIANGYEQCRADPCVFRRMVDGEVVGLIVIYVDDILLVASEQE-RQELLASLQKKFPVKDLGECTWYDGIGIEMDLENGITKLSQTAYIESIIKRFNVTTTAPTPAVPGADLGPKRDDEPTVDKPVREALGC 1095 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig19121.4797.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig19121.4797.1 >prot_H-paniculata_contig19121.4797.1 ID=prot_H-paniculata_contig19121.4797.1|Name=mRNA_H-paniculata_contig19121.4797.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=164bp MHGLVQAGCCWSIKITEDLKTLGFKQSRADPCVFRKIIDGGMRVIGVIHVback to top mRNA from alignment at H-paniculata_contig19121:1693..3335+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig19121.4797.1 ID=mRNA_H-paniculata_contig19121.4797.1|Name=mRNA_H-paniculata_contig19121.4797.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1643bp|location=Sequence derived from alignment at H-paniculata_contig19121:1693..3335+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig19121:1693..3335+ >mRNA_H-paniculata_contig19121.4797.1 ID=mRNA_H-paniculata_contig19121.4797.1|Name=mRNA_H-paniculata_contig19121.4797.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=984bp|location=Sequence derived from alignment at H-paniculata_contig19121:1693..3335+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |