mRNA_H-paniculata_contig19104.4791.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig19104.4791.1 vs. uniprot
Match: A0A540MM95_MALBA (Integrase catalytic domain-containing protein n=1 Tax=Malus baccata TaxID=106549 RepID=A0A540MM95_MALBA) HSP 1 Score: 219 bits (559), Expect = 3.000e-61 Identity = 155/408 (37.99%), Postives = 215/408 (52.70%), Query Frame = 3
Query: 195 LRSDQGGEFTGEAFRQFCAENSIKQEFSSTYTPQQNGAAERSWRSIFEMNRSRMITANMGRRYWAEAVRAAVYCLNCAPMRPHNGGTPYEKWHGTTPKLDHLRIFGCTAYVIFQSH*RRKLDDKAWVKVFLGYYEDSPSYRVYIPENKSVQLSRNVRFDEE---DFVTGHRGQLEHDGTRDMEGLFSAPSVTPALTRSHARGEQGSTSASQMSPTLPTYSLPAASANPLNRSPIRTRARARENREEGQGATARMAKVEGTGNPTGAVSKGGAKSAAGALNGPEA---GKWHVAMEEEWGALMKNGTWESEDPGRLPAGRKAIRTKWIFKRKLKEDGSVARYKARLVAQGVSQLKGEDFFETSAPVASIWTLRTAFSLAAEQDFELEGMDVDAAYLNAPAEEELFVKLP 1400
+RSD+GGEFT + F++FC N I++ + +PQQNG AER R+I +M RS + + + + WAEAV AVY N +P R G TP E W G P + HLR+FG A+V R KLDDK+ +F+GY +S Y++Y P N+ + +SR+V FDEE DF H G L + E T AR Q ++ SP + AS + R R R R+ + A E NPT + ++ EA KW AM+EE A+ KN TWE LP G+KAI KW++K K +G V RYKARLVA+G SQ G D+ E APVA + T+R SLAA+ ++++ MDV +A+LN EEE++++ P
Sbjct: 1 MRSDRGGEFTSKEFQEFCEANGIRRSLTVPRSPQQNGVAERKNRTILDMVRSMLKSKRLPKEMWAEAVACAVYLSNRSPTRSVWGKTPQEAWSGRKPGISHLRVFGSIAHVHVPDERRAKLDDKSEKFIFIGYDSNSKGYKLYNPNNRKMVISRDVTFDEEEEWDFGP-HAGDLHFFPQFEEENEQG--------TMEQAREVQQESTTPPASPISTNHGNSPASTSSSGSLNEREVPRTRSIRDLYEVA-------ERLDNPTLFCLFADCEP----VDFQEAVQDTKWKKAMDEEIEAIEKNETWELTV---LPKGQKAIGVKWVYKTKKNANGEVERYKARLVAKGYSQRAGIDYDEVFAPVARLETIRLLISLAAQNKWKIQQMDVKSAFLNGVLEEEVYIQQP 385
BLAST of mRNA_H-paniculata_contig19104.4791.1 vs. uniprot
Match: A0A2M4CK12_ANODA (Putative pol polyprotein (Fragment) n=1 Tax=Anopheles darlingi TaxID=43151 RepID=A0A2M4CK12_ANODA) HSP 1 Score: 226 bits (575), Expect = 5.360e-61 Identity = 147/428 (34.35%), Postives = 212/428 (49.53%), Query Frame = 3
Query: 177 RATNTRLRSDQGGEFTGEAFRQFCAENSIKQEFSSTYTPQQNGAAERSWRSIFEMNRSRMITANMGRRYWAEAVRAAVYCLNCAPMRPHNGGTPYEKWHGTTPKLDHLRIFGCTAYVIFQSH*RRKLDDKAWVKVFLGYYEDSPSYRVYIPENKSVQLSRNVRFDEEDFVTG---HRGQLEHDGTRDMEGLFSA--------------PSVTPALTRSHARGEQGSTSASQMSPTLPTYSLPAASANPLNRSPIRTRARARENREEGQGATARMAKVEGTGNPTGAVSKGGAKSAAGALNGPEAGKWHVAMEEEWGALMKNGTWESEDPGRLPAGRKAIRTKWIFKRKLKEDGSVARYKARLVAQGVSQLKGEDFFETSAPVASIWTLRTAFSLAAEQDFELEGMDVDAAYLNAPAEEELFVKLPRVF 1409
R T +RSDQGGE++ + + F IK +++++Y+PQQNG AER RS+ EM R + A + ++YWAEA+ AVY N +P +P N TPYE WHG PK++HLRIFGC A+ R+KL A FLGY D +YR+ + +SR+V+F E+ + H + H + E + P V PA + + + T PT +P P R A +++ E + A+ E+ W AM+EE AL N TWE RLP GRKA+ KW +KRK E+G + RYKARLVAQG SQ G+D+ E APV T RT +LA++Q+ ++ +D+ AYL+A +E++++K P F
Sbjct: 96 RKTPKAIRSDQGGEYSSKNLQDFYKREGIKPQYTASYSPQQNGVAERKNRSLIEMVRCMLFDAQLEQKYWAEAMNTAVYLQNISPTKPRNN-TPYETWHGVKPKVNHLRIFGCDAWAHIPKAKRKKLGATAQKLTFLGYSYDHKAYRLLDKTTNEIHISRDVKFIEKAPCSERAKHDRETRHQSKKPQEIIIDTTLKENPITIETQAEPEVQPAFEETREIVSEIDSDTEPRRSTRPTKGIP----------PDRLMANVIKHQIEQPHTYSE------------------------AIESTESTAWRAAMQEEINALQGNDTWELV---RLPLGRKAVGCKWTYKRKENENGEIVRYKARLVAQGYSQKFGQDYDEVFAPVIRQATFRTILTLASKQNMIVKHLDIKNAYLHAELQEDIYMKQPPGF 485
BLAST of mRNA_H-paniculata_contig19104.4791.1 vs. uniprot
Match: A0A4Y1RDE4_PRUDU (Transposable element protein n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1RDE4_PRUDU) HSP 1 Score: 216 bits (551), Expect = 2.620e-60 Identity = 146/414 (35.27%), Postives = 218/414 (52.66%), Query Frame = 3
Query: 195 LRSDQGGEFTGEAFRQFCAENSIKQEFSSTYTPQQNGAAERSWRSIFEMNRSRMITANMGRRYWAEAVRAAVYCLNCAPMRPHNGGTPYEKWHGTTPKLDHLRIFGCTAYVIFQSH*RRKLDDKAWVKVFLGYYEDSPSYRVYIPENKSVQLSRNVRFDEEDFVTGHRGQLEH------DGTRDMEGLFSAPSVTPALTRSHARGEQGSTSASQMSPTLPTYSLPAASANPLNRSPIRTRARARENREEGQGATARMAKVEGTGNPTGAVSKGGAKSAAGALNGPEAGK---WHVAMEEEWGALMKNGTWESEDPGRLPAGRKAIRTKWIFKRKLKEDGSVARYKARLVAQGVSQLKGEDFFETSAPVASIWTLRTAFSLAAEQDFELEGMDVDAAYLNAPAEEELFVKLPRVF 1409
+RSD+GGE+T + F +C + I ++ +++Y+PQQNG AER R+I EM S M + +R+WAEAV AVY LN +P + TP+E W G P + HL+IFGC Y + R K DDK+ +F+GY + YR+Y E K + +SR+V F+E+ + +++ R++ G TP A G S P P YS +S +P P+RTR+ + + T N +G + + EA K W AM++E + KN TWE D LP R I KWIFK K +DG + ++KARLVA+G +Q G DFFE APVA + T+RT +LAA++++ + +DV +A+LN +EE++V+ P+ F
Sbjct: 88 MRSDRGGEYTSQEFEDYCKDEGIWKQLTASYSPQQNGIAERKNRTIVEMATSMMNEKGLPKRFWAEAVFTAVYILNRSPTKVVKNKTPFEAWSGFKPSVRHLKIFGCICYAHIPAEKRTKFDDKSQKCIFVGYSSSTKGYRLYNVETKKLIVSRDVVFNEKARWDWNENKVQEMPYALVQEQREILGEHQEEEATPQTPA--AAGNN-----SNAEPVSPNYS---SSESP----PLRTRS---------------LNDIYETCNFSGIEPE----------SFEEAQKHEVWVKAMKDEIRMIEKNQTWELVD---LPKDRDVIGVKWIFKTKFNQDGGIQKHKARLVARGFTQKPGIDFFEIFAPVARLETIRTLIALAAQKNWLIYQLDVKSAFLNGVLKEEVYVEQPQGF 459
BLAST of mRNA_H-paniculata_contig19104.4791.1 vs. uniprot
Match: A0A5B7BAX9_DAVIN (Putative lectin receptor kinase (Fragment) n=1 Tax=Davidia involucrata TaxID=16924 RepID=A0A5B7BAX9_DAVIN) HSP 1 Score: 213 bits (543), Expect = 9.670e-60 Identity = 150/417 (35.97%), Postives = 209/417 (50.12%), Query Frame = 3
Query: 195 LRSDQGGEFTGEAFRQFCAENSIKQEFSSTYTPQQNGAAERSWRSIFEMNRSRMITANMGRRYWAEAVRAAVYCLNCAPMRPHNGGTPYEKWHGTTPKLDHLRIFGCTAYVIFQSH*RRKLDDKAWVKVFLGYYEDSPSYRVYIPENKSVQLSRNVRFDE------EDFVTGHRGQLEHDGTRDMEGLF---SAPSVTPALTRSHARGEQGSTSASQMSPTLPTYSLPAASANPLNRSPIRTRARARENREEGQGATARMAKVEGTGNPTGAVSKGGAKSAAGALNGPEAGK---WHVAMEEEWGALMKNGTWESEDPGRLPAGRKAIRTKWIFKRKLKEDGSVARYKARLVAQGVSQLKGEDFFETSAPVASIWTLRTAFSLAAEQDFELEGMDVDAAYLNAPAEEELFVKLPRVF 1409
LRSD+GGE+T AF+++C E I+ +F++ YTPQQNG AER R+I M R+ + + +++WAEAV + Y N P + TP E W G P + HLRIFGC AY R+KLDD+ +F+GY E+S +Y++Y P K V +SR+V F+E D T + D + + PS PA + RG S S S + PI+ R+ RE + + + + P L EA + W AMEEE A+ KN TWE LP +KAI KW++K K DG V RYKARLVA+G Q G D+ E APVA + T+R SLAA +++ +DV +A+LN EEE++V+ P F
Sbjct: 6 LRSDRGGEYTSNAFQEYCREQGIRHQFTTAYTPQQNGIAERKNRTILNMTRTMLKEKGLSKQFWAEAVACSTYLPNRYPTKSVKHMTPQEAWSGYKPNVAHLRIFGCVAYAQVPEAKRKKLDDRGEKCIFIGYSEESKAYKLYNPLTKKVVVSRDVIFNEGEVWIWSDVETSKVQPVMEDPEEPSPEISPPGAPPSPQPATPSTVQRGFPPSVGGSSNS----------------SSKPIKMRS-LREIYAQTEDGETNLFCLYADHEP---------------LTFQEAMEKDCWRSAMEEEIHAIEKNDTWELTI---LPQKQKAIGIKWMYKIKCTADGEVDRYKARLVAKGYRQKYGIDYDEVFAPVARLDTVRLLISLAAHHSWKIYQLDVKSAFLNGILEEEVYVQQPEGF 387
BLAST of mRNA_H-paniculata_contig19104.4791.1 vs. uniprot
Match: A0A151T355_CAJCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=2 Tax=Cajanus cajan TaxID=3821 RepID=A0A151T355_CAJCA) HSP 1 Score: 223 bits (569), Expect = 4.420e-59 Identity = 141/406 (34.73%), Postives = 200/406 (49.26%), Query Frame = 3
Query: 192 RLRSDQGGEFTGEAFRQFCAENSIKQEFSSTYTPQQNGAAERSWRSIFEMNRSRMITANMGRRYWAEAVRAAVYCLNCAPMRPHNGGTPYEKWHGTTPKLDHLRIFGCTAYVIFQSH*RRKLDDKAWVKVFLGYYEDSPSYRVYIPENKSVQLSRNVRFDEEDFVTGHRGQLEHDGTRDMEGLFSAPSVTPALTRSHARGEQGSTSASQMSPTLPTYSLPAASANPLNRSPIRTRARARENREEGQGATARMAKVEGTGNPTGAVSKGGAKSAAGALNGPEAGKWHVAMEEEWGALMKNGTWESEDPGRLPAGRKAIRTKWIFKRKLKEDGSVARYKARLVAQGVSQLKGEDFFETSAPVASIWTLRTAFSLAAEQDFELEGMDVDAAYLNAPAEEELFVKLPRVF 1409
RLRSD G E+T F++FC + I+ + + YTPQQNG +ER R++ EM R + + + +WAEAV +VY LN P + G TP+E WHG TP ++HL++FGC Y + R KLD K+ V +FLGY S YR+Y P K + +SRNV+FDE + + E R +E L ++ E+ + L P L R A E +E A A++EG W VAM+EE + KN TW+ D P +K I KW+++ KL DGSV + KARLV +G Q G DF +T APVA T+R +LAA+ +++ DV +A+LN EE+++V P F
Sbjct: 520 RLRSDNGTEYTAGEFKKFCEQVGIQHQLTVPYTPQQNGVSERKNRTVMEMARCLLFEKGLPKTFWAEAVNTSVYLLNLLPTKALKGNTPFEAWHGRTPSVEHLKVFGCVCYALVPEVKRDKLDQKSEVGIFLGYSSYSKGYRIYNPATKKILVSRNVKFDELSRWNWEKSKAEASNKRQLE--------VDNLQEQNSESEEQN---------LDDDDFPVRGTRDLAEIYERCNVAALEPKEY-----AEAAELEG---------------------------WRVAMQEEMNMIEKNNTWQLVD---RPINQKVIGLKWVYRTKLNYDGSVNKLKARLVVKGYHQQYGVDFLDTFAPVARHDTIRMLVALAAKFGWKIYHFDVKSAFLNGFLEEDIYVDQPEGF 873
BLAST of mRNA_H-paniculata_contig19104.4791.1 vs. uniprot
Match: A0A1J3IBS4_NOCCA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 (Fragment) n=1 Tax=Noccaea caerulescens TaxID=107243 RepID=A0A1J3IBS4_NOCCA) HSP 1 Score: 219 bits (558), Expect = 2.790e-58 Identity = 146/410 (35.61%), Postives = 206/410 (50.24%), Query Frame = 3
Query: 195 LRSDQGGEFTGEAFRQFCAENSIKQEFSSTYTPQQNGAAERSWRSIFEMNRSRMITANMGRRYWAEAVRAAVYCLNCAPMRPHNGGTPYEKWHGTTPKLDHLRIFGCTAYVIFQSH*RRKLDDKAWVKVFLGYYEDSPSYRVYIPENKSVQLSRNVRFDEED---FVTGHRGQLEHD--GTRDMEGLFSAPSVTPALTRSHARGEQGSTSASQMSPTLPTYSLPAASANPLNRSPIRTRARARENREEGQGATARMAKVEGTGNPTGAVSKGGAKSAAGALNGPEAGKWHVAMEEEWGALMKNGTWESEDPGRLPAGRKAIRTKWIFKRKLKEDGSVARYKARLVAQGVSQLKGEDFFETSAPVASIWTLRTAFSLAAEQDFELEGMDVDAAYLNAPAEEELFVKLPRVF 1409
LR+D+GGEFT F +FC I E ++ YTP+QNG AER R++ EM RS + N+ ++WAE+VR AVY LN +P + TPYE W G P + HLR+FG AY + +H R+KLDDK+ +FLGY S YR+Y P + + SRNV FDEE G G+LE D + + +P + A T +++ +P S + R+ + E Q A T +PT E W AM+EE ++ KN TW+ + LP G+ +I KW+FK K DGS+ +YKARLV +G +Q G D+ ET +PVA T+RT +L A + + DV +A+LN EE++V P F
Sbjct: 143 LRTDRGGEFTSTEFNKFCESEGIHHELTTAYTPEQNGVAERKNRTVVEMARSMLKQKNLPNQFWAESVRTAVYLLNISPTKAVLNRTPYEAWCGRKPGVSHLRVFGSIAYSLIDAHNRKKLDDKSEKCIFLGYSSQSKGYRLYNPVSGKIIESRNVTFDEETVWRLREGDNGELEEIVVDNNDEQVVSESPVGSEANTPTNS---------------VPNSXXXXXXXXXXXXSNAPQKFRSLQEIYEVQHAFF-------TSDPTMFT------------EAAEKEDWRKAMDEEITSIEKNSTWQLVE---LPEGKHSIGVKWVFKTKYHADGSIQKYKARLVVKGYAQEYGVDYEETFSPVARFDTVRTLLALGAHMHWPIYQFDVKSAFLNGELLEEVYVDQPEGF 515
BLAST of mRNA_H-paniculata_contig19104.4791.1 vs. uniprot
Match: A0A4Y1QR18_PRUDU (Multidrug resistance-associated protein 9 n=1 Tax=Prunus dulcis TaxID=3755 RepID=A0A4Y1QR18_PRUDU) HSP 1 Score: 211 bits (538), Expect = 3.380e-58 Identity = 144/414 (34.78%), Postives = 217/414 (52.42%), Query Frame = 3
Query: 195 LRSDQGGEFTGEAFRQFCAENSIKQEFSSTYTPQQNGAAERSWRSIFEMNRSRMITANMGRRYWAEAVRAAVYCLNCAPMRPHNGGTPYEKWHGTTPKLDHLRIFGCTAYVIFQSH*RRKLDDKAWVKVFLGYYEDSPSYRVYIPENKSVQLSRNVRFDEEDFVTGHRGQLEH------DGTRDMEGLFSAPSVTPALTRSHARGEQGSTSASQMSPTLPTYSLPAASANPLNRSPIRTRARARENREEGQGATARMAKVEGTGNPTGAVSKGGAKSAAGALNGPEAGK---WHVAMEEEWGALMKNGTWESEDPGRLPAGRKAIRTKWIFKRKLKEDGSVARYKARLVAQGVSQLKGEDFFETSAPVASIWTLRTAFSLAAEQDFELEGMDVDAAYLNAPAEEELFVKLPRVF 1409
+RSD+GGE+T + F +C + I ++ +++Y+PQQNG AER R+I +M S M + +R+WAEAV AVY LN +P + T +E W G P + HL+IFGC Y + R K DDK+ +F+GY + YR+Y E K + +SR+V F+E+ + +++ R++ G TP A G S P P YS +S +P P+RTR+ + + T N +G + + EA K W AM++E + KN TWE D LP R I KWIFK K +DG + ++KARLVA+G +Q G DFFE APVA + T+RT +LAA++++ + +DV +A+LN +EE++V+ P+ F
Sbjct: 35 MRSDRGGEYTSQEFEDYCKDEGIWKQLTASYSPQQNGIAERKNRTIVDMATSMMNEKGLPKRFWAEAVFTAVYILNRSPTKVVKNKTLFEAWSGFKPSVRHLKIFGCICYAHIPAEKRTKFDDKSQKCIFVGYSSSTKGYRLYNVETKKLIVSRDVVFNEKARWDWNENKVQEMPYALVQEQREILGEHQEEEATPQTPA--AAGNN-----SNAEPVSPNYS---SSESP----PLRTRS---------------LNDIYETCNFSGIEPE----------SFEEAQKHEVWVKAMKDEIRMIEKNQTWELVD---LPKDRDVIGVKWIFKTKFNQDGGIQKHKARLVARGFTQKPGIDFFEIFAPVARLETIRTLIALAAQKNWLIYQLDVKSAFLNGVLKEEVYVEQPQGF 406
BLAST of mRNA_H-paniculata_contig19104.4791.1 vs. uniprot
Match: A0A6S7K875_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7K875_PARCT) HSP 1 Score: 214 bits (545), Expect = 1.950e-56 Identity = 144/410 (35.12%), Postives = 206/410 (50.24%), Query Frame = 3
Query: 195 LRSDQGGEFTGEAFRQFCAENSIKQEFSSTYTPQQNGAAERSWRSIFEMNRSRMITANMGRRYWAEAVRAAVYCLNCAPMRPHNGGTPYEKWHGTTPKLDHLRIFGCTAYVIFQSH*RRKLDDKAWVKVFLGYYEDSPSYRVYIPENKSVQLSRNVRFDEEDF-----VTGHRGQLEHDGTRDMEGLFSAPSVTPALTRSHARGEQGSTSASQMSPTLPTYSLPAASANPLNRSPIRTRARARENREEGQGATARMAKVEGTGNPTGAVSKGGAKSAAGALNGPEAGKWHVAMEEEWGALMKNGTWESEDPGRLPAGRKAIRTKWIFKRKLKEDGSVARYKARLVAQGVSQLKGEDFFETSAPVASIWTLRTAFSLAAEQDFELEGMDVDAAYLNAPAEEELFVKLPRVF 1409
LR+D GGEFT F + +K E S TP+QNG AER R++ E R +I + + +++W EA+ AVY N +P + TP+E W G P + HLR FGCT Y R+KLD KA V LGY ++ YR+Y P+N V SR+V+F+E +F + G+ Q + T ++ +Q A +A R P+R R R G+ T V PT VS+ AL GP A +WH AM++E +L ++ W+ + LP RKA+ KW+FK K DGS+ R+KARLVAQG SQ G D+ ET +PV ++RT +L+ ++ +L MDV AA+LN E+E+++K P F
Sbjct: 550 LRTDNGGEFTSNEFENYLKSEGVKHELSVPKTPEQNGVAERLNRTLIEAVRGMLIQSKLPQKFWVEALSTAVYLHNRSPTKGVANMTPFEAWTGVKPDVKHLRSFGCTVYAHIPKDERKKLDSKAKKCVLLGYGTETKGYRLYDPQNSRVIYSRDVKFNESEFGIEKELPGNEFQADKHVTLELSNDNDVV----------VEDDQ------------------ADNAEINERQPVRER---RAPDRFGEWVTIASKDVV---EPT-TVSE--------ALCGPNAERWHEAMQQEMDSLQEHDVWKLTE---LPKDRKAVGCKWVFKVKYNADGSIERHKARLVAQGFSQRFGVDYDETFSPVVRFESIRTVIALSVQRGLKLHQMDVTAAFLNGELEDEVYMKQPEGF 913
BLAST of mRNA_H-paniculata_contig19104.4791.1 vs. uniprot
Match: A0A6A3B0J2_HIBSY (Agamous-like MADS-box protein AGL6 n=1 Tax=Hibiscus syriacus TaxID=106335 RepID=A0A6A3B0J2_HIBSY) HSP 1 Score: 212 bits (540), Expect = 2.950e-55 Identity = 144/402 (35.82%), Postives = 202/402 (50.25%), Query Frame = 3
Query: 195 LRSDQGGEFTGEAFRQFCAENSIKQEFSSTYTPQQNGAAERSWRSIFEMNRSRMITANMGRRYWAEAVRAAVYCLNCAPMRPHNGGTPYEKWHGTTPKLDHLRIFGCTAYVIFQSH*RRKLDDKAWVKVFLGYYEDSPSYRVYIPENKSVQLSRNVRFDEEDFVTGHRGQLEHDGTRDMEGLFSAPSVTPALTRSHARGEQGSTSASQMSPTLPTYSLPAASANPLNRSPIRTRARARENREEGQGATARMAKVEGTGNPTGAVSKGGAKSAAGALNGPEAGKWHVAMEEEWGALMKNGTWESEDPGRLPAGRKAIRTKWIFKRKLKEDGSVARYKARLVAQGVSQLKGEDFFETSAPVASIWTLRTAFSLAAEQDFELEGMDVDAAYLNAPAEEELFVKLP 1400
+RSD+GGEFT F++FC N I++ + +PQQNG AER R+I +M RS + + + + +WAEAV AVY N +P R G TP E W G P + HLR FG A+V R KLDDK+ +F+GY +S Y++Y P+NK +SR+V F+EE G+ + + D F P E T Q+ + + P S N + + T V+ N AV + KW AM+EE A+ KN TWE LP G KAI KW++K K G + R+KARLVA+G SQ G D+ E APVA + T+R SLAA+ ++++ MDV +A+LN EEEL+++ P
Sbjct: 510 MRSDRGGEFTSREFQEFCEANGIRRPMTVPRSPQQNGVAERKNRTILDMARSMLKSKKLPKEFWAEAVSCAVYLSNRSPTRSVWGKTPQEAWSGRKPGISHLRTFGSIAHVHVPDERRTKLDDKSESFIFIGYDANSKGYKLYNPDNKKFVISRDVVFNEE-------GEWDFNSHTDDFNFF------PQFE------EDEQTMREQLDESQQELATPPTSPNINHSRRLIT-----------------FIIVKWESNFQEAVQEK---------------KWRDAMDEEIKAIEKNDTWELTS---LPKGHKAIGVKWVYKTKQNAKGEIERHKARLVAKGYSQKAGIDYDEIFAPVARLETIRLIISLAAQNKWKIQQMDVKSAFLNGVLEEELYIQQP 857
BLAST of mRNA_H-paniculata_contig19104.4791.1 vs. uniprot
Match: A0A0V0VEL0_9BILA (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=5 Tax=Trichinella TaxID=6333 RepID=A0A0V0VEL0_9BILA) HSP 1 Score: 206 bits (525), Expect = 3.990e-55 Identity = 144/413 (34.87%), Postives = 193/413 (46.73%), Query Frame = 3
Query: 192 RLRSDQGGEFTGEAFRQFCAENSIKQEFSSTYTPQQNGAAERSWRSIFEMNRSRMITANMGRRYWAEAVRAAVYCLNCAPMRPHNGGTPYEKWHGTTPKLDHLRIFGCTAYVIFQSH*RRKLDDKAWVKVFLGYYEDSPSYRVYIPENKSVQLSRNVRFDEE-----DFVTGHRGQLEHDGTRDMEGLFSAPSVTPALTRSHARGEQGSTSASQMSPTLPTYSLPAASANPLN--RSPIRTRARARENREEGQGATARMAKVEGTGNPTGAVSKGGAKSAAGALNGPEAGKWHVAMEEEWGALMKNGTWESEDPGRLPAGRKAIRTKWIFKRKLKEDGSVARYKARLVAQGVSQLKGEDFFETSAPVASIWTLRTAFSLAAEQDFELEGMDVDAAYLNAPAEEELFVKLPRVF 1409
R+R+D+G EF F E I E + YTPQ NG AER R++ E R+ + T N+ R WAEAV A Y LN P R TPYE+W G P ++HLRIFGC AYV RRK D KA +F+GY + +RV+ V +V+F+E + G +D E F T T G P S N + +P++ R++ A A E AL G A KW AM EE AL N TW D LPA RK I+ KW+FK K+ DG V++YKARLVA+G SQ D+FET APV ++RT ++AA++D E++ DV A+L+ +E +F++ P F
Sbjct: 28 RIRTDRGTEFANRELDNFLTEKKIVHEKTPPYTPQCNGMAERENRTLVEKARAMLHTRNLPRCLWAEAVHTAAYLLNRIPNRKEITKTPYEEWFGRRPTVEHLRIFGCDAYVHIPDQHRRKFDPKARKVIFVGYGPSNKMFRVFDTNKHRVDEVTDVQFNESLQKRLVLIDGEEDSWMQTADKD-EDDFLEDDTTDDKTEKRGPGR------------------PPGSKNKIKVISNPLKMELRSKSTERTAMLAAADPLTEEE------------------ALEGANAEKWKEAMLEEISALHMNDTWILTD---LPADRKTIQCKWVFKSKINSDGEVSKYKARLVAKGYSQRAEIDYFETFAPVVRYESVRTLLAIAADEDLEIQQFDVKTAFLHGKIDELIFMEQPPCF 400 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig19104.4791.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig19104.4791.1 >prot_H-paniculata_contig19104.4791.1 ID=prot_H-paniculata_contig19104.4791.1|Name=mRNA_H-paniculata_contig19104.4791.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=121bp MPRQKKSCLLSYPECSPFSRDIPFVRRLKKSLYDLKQSGRNWNNALDDFLback to top mRNA from alignment at H-paniculata_contig19104:2971..4875+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig19104.4791.1 ID=mRNA_H-paniculata_contig19104.4791.1|Name=mRNA_H-paniculata_contig19104.4791.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1905bp|location=Sequence derived from alignment at H-paniculata_contig19104:2971..4875+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig19104:2971..4875+ >mRNA_H-paniculata_contig19104.4791.1 ID=mRNA_H-paniculata_contig19104.4791.1|Name=mRNA_H-paniculata_contig19104.4791.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=726bp|location=Sequence derived from alignment at H-paniculata_contig19104:2971..4875+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |