prot_H-paniculata_contig19042.4772.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig19042.4772.1 vs. uniprot
Match: W7TJ26_9STRA (Gag-pol polyprotein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TJ26_9STRA) HSP 1 Score: 87.0 bits (214), Expect = 1.240e-17 Identity = 47/99 (47.47%), Postives = 63/99 (63.64%), Query Frame = 0
Query: 1 MDVDAAYLNAPVEEELFDKPPP---EFSPFSGDIPFVCRLRKCLQGLKQSGRNWNNPLDDFLVGIGLDRSTTDSCLYFSRDEGEETNLLVVVYVDDQVI 96
MDVD AYL + +EE+++ K PP ++ P G++ VCRLRK L GLKQSGRNW+ +D + G GL S D CLY E L++V+YVDD +I
Sbjct: 304 MDVDTAYLQSDLEEKVYIKQPPGYEKYGPNGGEL--VCRLRKSLYGLKQSGRNWHKKIDGWFRGYGLHPSYADPCLYVKFASSGEI-LVIVLYVDDLII 399
BLAST of mRNA_H-paniculata_contig19042.4772.1 vs. uniprot
Match: A0A182GFZ6_AEDAL (Integrase catalytic domain-containing protein n=2 Tax=Aedes albopictus TaxID=7160 RepID=A0A182GFZ6_AEDAL) HSP 1 Score: 86.3 bits (212), Expect = 2.370e-17 Identity = 49/107 (45.79%), Postives = 65/107 (60.75%), Query Frame = 0
Query: 1 MDVDAAYLNAPVEEELFDKPPPEFSPFSGDIPFVCRLRKCLQGLKQSGRNWNNPLDDFLVGIGLDRSTTDSCLYFSRDEGEETNLLVVVYVDDQVIDHRCEKVEKFD 107
+D+ +AYL A +EE++F + PP F SG+ VCRL+KCL GLKQS R WN +D F IG + DSCLY G+ + +VVYVDD VI C E+F+
Sbjct: 574 LDIKSAYLYAELEEDIFMRQPPGFQ--SGNNK-VCRLKKCLYGLKQSARVWNKKIDMFFKSIGFLPGSADSCLYVREKNGK--HCFIVVYVDDMVI--FCNSEEEFN 673
BLAST of mRNA_H-paniculata_contig19042.4772.1 vs. uniprot
Match: W7TCB8_9STRA (Gag-pol polyprotein n=3 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TCB8_9STRA) HSP 1 Score: 85.1 bits (209), Expect = 4.980e-17 Identity = 48/108 (44.44%), Postives = 64/108 (59.26%), Query Frame = 0
Query: 1 MDVDAAYLNAPVEEELFDKPPPEFSPF-SGDIPFVCRLRKCLQGLKQSGRNWNNPLDDFLVGIGLDRSTTDSCLYFSRDEGEETNLLVVVYVDDQVIDHRC-EKVEKF 106
MDV+ AYL + +EE+++ K PP + + S VCRLRK L GLKQSGRNW+ +D + G G S+ D CLY E L++V+YVDD +I E V KF
Sbjct: 84 MDVEPAYLQSDLEEKVYVKQPPGYEQYGSNGEELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHPSSADPCLYVKFGSSGEI-LVIVLYVDDLIITSNSREMVGKF 190
BLAST of mRNA_H-paniculata_contig19042.4772.1 vs. uniprot
Match: W7TII5_9STRA (Gag-pol polyprotein n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TII5_9STRA) HSP 1 Score: 84.0 bits (206), Expect = 5.140e-17 Identity = 44/97 (45.36%), Postives = 59/97 (60.82%), Query Frame = 0
Query: 1 MDVDAAYLNAPVEEELFDKPPPEFSPFSGD-IPFVCRLRKCLQGLKQSGRNWNNPLDDFLVGIGLDRSTTDSCLYFSRDEGEETNLLVVVYVDDQVI 96
MDVD AYL + +EE+++ K PP + + VCRLRK L GLKQSGRNW+ +D + G G S+ D CLY E L++V+YVDD +I
Sbjct: 84 MDVDTAYLQSDLEEKIYVKQPPGYEQCGPNGEELVCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHSSSADPCLYVKFGSSGEM-LVIVLYVDDLII 179
BLAST of mRNA_H-paniculata_contig19042.4772.1 vs. uniprot
Match: A0A7D9HG25_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HG25_PARCT) HSP 1 Score: 84.7 bits (208), Expect = 7.070e-17 Identity = 45/108 (41.67%), Postives = 69/108 (63.89%), Query Frame = 0
Query: 1 MDVDAAYLNAPVEEELFDKPPPEFSPFSGD-IPFVCRLRKCLQGLKQSGRNWNNPLDDFLVGIGLDRSTTDSCLYFSRDEGEETNLLVVVYVDDQVI-DHRCEKVEKF 106
MDV A+L+AP++ E+F + P F S + + V RL+K L GLKQSGRNWN LD++L+ G R+ D C+Y + GE+ ++VV++VDD +I +K+ +F
Sbjct: 254 MDVKTAFLHAPIDHEIFMEQPMGFEELSENGVKLVYRLKKSLYGLKQSGRNWNRVLDEYLISDGFVRNPVDHCVY-QKQTGEDI-IIVVIWVDDLIIASSNTDKIRQF 359
BLAST of mRNA_H-paniculata_contig19042.4772.1 vs. uniprot
Match: W7T174_9STRA (Gag-pol polyprotein n=2 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7T174_9STRA) HSP 1 Score: 84.3 bits (207), Expect = 1.120e-16 Identity = 46/99 (46.46%), Postives = 62/99 (62.63%), Query Frame = 0
Query: 1 MDVDAAYLNAPVEEELFDKPP---PEFSPFSGDIPFVCRLRKCLQGLKQSGRNWNNPLDDFLVGIGLDRSTTDSCLYFSRDEGEETNLLVVVYVDDQVI 96
MDVD AYL + +EE+++ K P ++ P G++ VCRLRK L GLKQSGRNW+ +D + G G S+ D CLY E L+VV+YVDD +I
Sbjct: 602 MDVDTAYLQSDLEEKVYIKQPHGYEKYGPNGGEL--VCRLRKSLYGLKQSGRNWHKKIDGWFRGYGFHPSSADPCLYVKFGSSGEM-LVVVLYVDDLII 697
BLAST of mRNA_H-paniculata_contig19042.4772.1 vs. uniprot
Match: A0A4Q3EC79_9SPHI (Transposon Pol polyprotein (Fragment) n=1 Tax=Sphingobacteriaceae bacterium TaxID=2021370 RepID=A0A4Q3EC79_9SPHI) HSP 1 Score: 84.0 bits (206), Expect = 1.270e-16 Identity = 43/104 (41.35%), Postives = 67/104 (64.42%), Query Frame = 0
Query: 1 MDVDAAYLNAPVEEELFDKPPPEFSPFSGDIPFVCRLRKCLQGLKQSGRNWNNPLDDFLVGIGLDRSTTDSCLYFSRDEGEETNLLVVVYVDDQVI--DHRCEK 102
MD +A+LN P+ E+++ + PP F S VC+L+K + GLKQSGRNWN L+ L+ GL R +D C+Y +R+ G ++V+V+VDD +I + +CE+
Sbjct: 55 MDAVSAFLNGPLNEDVYMEQPPNFEDKSNR---VCKLKKSIYGLKQSGRNWNQLLNQTLIDFGLKRCLSDQCIYVARNSGNI--MIVMVWVDDVLIACNQKCEE 153
BLAST of mRNA_H-paniculata_contig19042.4772.1 vs. uniprot
Match: A0A6S7HT97_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HT97_PARCT) HSP 1 Score: 83.6 bits (205), Expect = 1.960e-16 Identity = 46/98 (46.94%), Postives = 63/98 (64.29%), Query Frame = 0
Query: 1 MDVDAAYLNAPVEEELFDKPPPEFSPFS--GDIPFVCRLRKCLQGLKQSGRNWNNPLDDFLVGIGLDRSTTDSCLYFSRDEGEETNLLVVVYVDDQVI 96
MDV AYLNAPV+ EL+ + P F S G++ VC+L K L GLKQSGRNWN+ L FL G+ + +D C+Y + G++T LL+ +VDD +I
Sbjct: 16 MDVKTAYLNAPVDCELYIEQPEGFVKHSESGEM-LVCKLNKSLYGLKQSGRNWNHMLHTFLTSKGITQLVSDPCVYIKKQNGKKTILLI--WVDDIII 110
BLAST of mRNA_H-paniculata_contig19042.4772.1 vs. uniprot
Match: A0A6S7IT23_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7IT23_PARCT) HSP 1 Score: 83.6 bits (205), Expect = 2.040e-16 Identity = 46/98 (46.94%), Postives = 63/98 (64.29%), Query Frame = 0
Query: 1 MDVDAAYLNAPVEEELFDKPPPEFSPFS--GDIPFVCRLRKCLQGLKQSGRNWNNPLDDFLVGIGLDRSTTDSCLYFSRDEGEETNLLVVVYVDDQVI 96
MDV AYLNAPV+ EL+ + P F S G++ VC+L K L GLKQSGRNWN+ L FL G+ + +D C+Y + G++T LL+ +VDD +I
Sbjct: 323 MDVKTAYLNAPVDCELYIEQPEGFVKHSESGEM-LVCKLNKSLYGLKQSGRNWNHMLHTFLTSKGITQLVSDPCVYIKKQNGKKTILLI--WVDDIII 417
BLAST of mRNA_H-paniculata_contig19042.4772.1 vs. uniprot
Match: A0A6S7HLY2_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HLY2_PARCT) HSP 1 Score: 83.2 bits (204), Expect = 2.740e-16 Identity = 44/108 (40.74%), Postives = 68/108 (62.96%), Query Frame = 0
Query: 1 MDVDAAYLNAPVEEELFDKPPPEFSPFSGD-IPFVCRLRKCLQGLKQSGRNWNNPLDDFLVGIGLDRSTTDSCLYFSRDEGEETNLLVVVYVDDQVI-DHRCEKVEKF 106
MDV A+L+ P++ E+F + P F S + + V RL+K L GLKQSGRNWN LD++L+ G R+ D C+Y + GE+ ++VV++VDD +I +K+ +F
Sbjct: 279 MDVKTAFLHVPIDHEIFMEQPMGFEELSENGVKLVYRLKKSLYGLKQSGRNWNRVLDEYLISDGFIRNPVDHCVY-QKQTGEDI-IIVVIWVDDLIIASSNTDKISQF 384 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig19042.4772.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig19042.4772.1 ID=prot_H-paniculata_contig19042.4772.1|Name=mRNA_H-paniculata_contig19042.4772.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=113bpback to top Annotated Terms
The following terms have been associated with this polypeptide:
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