mRNA_H-paniculata_contig1902.4766.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig1902.4766.1 vs. uniprot
Match: D8LC77_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LC77_ECTSI) HSP 1 Score: 305 bits (781), Expect = 5.420e-96 Identity = 188/326 (57.67%), Postives = 240/326 (73.62%), Query Frame = 3
Query: 375 PSLMEQMMTEAMAAREEGMKKEQTKNRDRAKKDFGKGLKKGFLGGGSSAVA----------------RNRKAKAGAREAKRDSIPTITGRKTTSGSRSELEFDLSIKASTSSSNPGLVLPEVQEAMNEANQNNLGSSSNNKSNSHGLAGTEWLTPELLDKISQRPRLAAMLMNPRFAQAMQLMSTSPQEAKALFASSPEAQETFSQLSTLLAEHFTTMGKAADARAAAADADRRKVADGPLAQEALRKAAAGVGIAATTKPSPAEK-ADVERVLEQPELRELLMDPGMQRVLQECEQPSNLAQYMRHPEFGPKLQLMARAGLVSFR 1301
PSLMEQMM EAMAA+E ++++ + AK+ FG GLKKGFL + A R +++ +GA SIP ITGRK +SG LEFD+S +AS+++S+ L+LPEVQEAM + N LG +S G G EWLTPELL KIS++PRLAAML +PRF++AM+LMSTSP++A +F SS EA+E+F++L +LL++HFT MG AAD +AAA +ADRR+VADGPLAQEALR+AA GVG+AAT P+ AE+ A V++VL+QPELRELLMDPGMQRVLQEC +P LA+YMRHPEFGPKLQLMA+AGL+SFR
Sbjct: 35 PSLMEQMMAEAMAAKEVKSQEQRLEQSRDAKQTFGGGLKKGFLSRPTRTTAVSSAXXXXXXXXXXXXRGKESTSGAPPEVEGSIPVITGRKASSGG---LEFDVSAEASSTTSD-SLLLPEVQEAMKHSASNPLGGASG------GGGGQEWLTPELLQKISEKPRLAAMLTDPRFSKAMELMSTSPKDALGMFESSAEARESFTELMSLLSKHFTAMGDAADEKAAAEEADRRRVADGPLAQEALRRAAEGVGVAAT--PATAEETATVDKVLQQPELRELLMDPGMQRVLQECGEPQELARYMRHPEFGPKLQLMAKAGLISFR 348
BLAST of mRNA_H-paniculata_contig1902.4766.1 vs. uniprot
Match: A0A7S2RZ79_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RZ79_9STRA) HSP 1 Score: 117 bits (293), Expect = 5.360e-25 Identity = 82/229 (35.81%), Postives = 126/229 (55.02%), Query Frame = 3
Query: 612 SRSELEFDLSIKASTSSSNPGLVLPEVQEAMNEANQNNLGSSSNNKSNSHGLAGTEWLTPELLDKISQRPRLAAMLMNPRFAQAMQLMSTSPQEAKALFASSPEAQETFSQLSTLLAEHFTTMGKAADARAAAADADRRKVADGPLAQEALRKAAAGVGIAATTKPSPA--EKADVERVLEQPELRELLMDPGMQRVLQECEQPSNLAQYMRHPEFGPKLQLMARAGLV 1292
S +++E ++KA+ + LVL EVQ+AM A +G L W+T +L+ K ++ P LA L +PR+ A+Q + +P++A F PE ++ + EHFT +G D + D V GPLA++A+R+A+ + + P P+ E A V+R+++ ELRELLMD G+QRV+ EC+QP L YMR +GPKL+ +A AGLV
Sbjct: 171 SSAKVEAIPTLKAAKDTKKNDLVLDEVQDAMKSAG-GGMGQM---------LQDGAWMTEDLMTKFAKNPLLAKGLSDPRYTAAIQELQKNPKQAMEKFQHDPELSAFLNEFCQTMGEHFTKLG---DQQQPPVDPATAAV-HGPLAEDAVRRASERAKQSPSPPPQPSKEEDAQVQRIMQDTELRELLMDSGLQRVMMECQQPGKLQMYMRDKTWGPKLRKLADAGLV 385
BLAST of mRNA_H-paniculata_contig1902.4766.1 vs. uniprot
Match: A0A835Z085_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z085_9STRA) HSP 1 Score: 108 bits (271), Expect = 1.310e-23 Identity = 80/219 (36.53%), Postives = 103/219 (47.03%), Query Frame = 3
Query: 675 LVLPEVQEAMNEANQNNLGSSSNNKSNSHGLAGTEWLTPELLDKISQRPRLAAMLMNPRFAQAMQLMSTSPQEAKALFASSPEAQETFSQLSTLLAEHFTTMGKAADARAAAADADRRKVADGPLAQEALRKAAAGVGIAATTKPSP----------AEKADVERVLEQPELRELLMDPGMQRVLQECEQPSNLAQYMRHPEFGPKLQLMARAGLVSFR 1301
+VLPEVQ+AM E + L S+ WLTP LL KI+ RP LAA L +PRF +A++LM P+ A ALF +A+ F++L LL HF +G A A ADV R+L LRELL+DPGMQ VLQEC P L Y HPE+GPK++ +A+AGLV +
Sbjct: 1 VVLPEVQDAMAEQGRALLSSTD------------AWLTPALLSKIAARPALAAALQSPRFTRALELMRDDPRAAMALFGGDADARALFTELLGLLGTHFEELGAQTSQAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAADADVARILADEGLRELLVDPGMQTVLQECSAPGRLRHYAAHPEWGPKIRRLAQAGLVQIQ 207
BLAST of mRNA_H-paniculata_contig1902.4766.1 vs. uniprot
Match: A0A7R9U615_9STRA (Hypothetical protein n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U615_9STRA) HSP 1 Score: 100 bits (248), Expect = 3.520e-19 Identity = 104/335 (31.04%), Postives = 155/335 (46.27%), Query Frame = 3
Query: 372 EPSLMEQMMTEAMAAREEGMKKEQTKNRDRAKKDFGKGLKKGFLGGGSSAVARNRKAKA---------------GAREAKRDSIPTITGRKTTSGSRSELEFDLSIKASTSSSNPGLVLPEVQEAMNEANQNNLGSSSNNKSNSHGLAGTEWLTPELLDKISQRPRLAAMLMNPRFAQAMQLMSTSPQEAKALFASSPEAQETFSQLSTLLAEHFTTMGKAADARAAAADADRRKV---ADGPLA------QEALRKAAAGVGIAATTKPSPAEKADVERVLEQPELRELLMDPGMQRVLQECE-QPSNLAQYMRHPEFGPKLQLMARAGLVSFR 1301
+PSLM +M+ A AR + +TK + R KK FG G +K L +R P+ G + SRSE E + S ++++P L LPEVQ AM E+ L+ WLTPEL+ KI + PRL A + NP F + M ++P + SPE QE + L+ +HF +G DA++ A ++R+V A GPLA +EA +KA +G + S E+ +V+ L+ PE+R+LLMD +QRVL E P+ + M+ P+ K++ MA GLV +
Sbjct: 57 DPSLMSEMLAAAEEARR-AKAEAKTKEQRRLKKSFGSGFQKXXLXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXNTTPGRRSGAPSEAGE---ARSRSE-EAPTLVGKSKTAADP-LRLPEVQAAMKESMAPLQAK----------LSEGSWLTPELMQKIQESPRLMAAMSNPAFGALLGRMQSNPSQVLKELKDSPETQELLKEFMVLMGKHFEALGAEDDAKSEAKQEEQRQVEQAARGPLAKKILEEEEAKKKAGSGSTL---DHLSDRERKEVDDHLQNPEVRQLLMDEDVQRVLVEASTNPAAFHRAMQSPDIARKIRRMAHLGLVQIQ 372
BLAST of mRNA_H-paniculata_contig1902.4766.1 vs. uniprot
Match: A0A7S2KX84_9STRA (Hypothetical protein n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KX84_9STRA) HSP 1 Score: 95.1 bits (235), Expect = 3.530e-17 Identity = 65/203 (32.02%), Postives = 108/203 (53.20%), Query Frame = 3
Query: 687 EVQEAMNEANQNNLGSSSNNKSNSHGLAGT-EWLTPELLDKISQRPRLAAMLMNPRFAQAMQLMSTSPQEAKALFASSPEAQETFSQLSTLLAEHFTTMGKAADARAAAADADRRKVADGPLAQEALRKAAAGVGIAATTKPSPAEKADVERVLEQPELRELLMDPGMQRVLQECEQPSNLAQYMRHPEFGPKLQLMARAGLV 1292
EVQEAM EAN L L+G +W TP+L++K + PRL L +P+F + ++ + +P+ A + PE + ++ +L+ +HFT + K D+ + GPLA+EAL + + G + S E+ V ++L +L +LMDP MQ +++EC +P + +YMR +GPKL+ + AGL+
Sbjct: 276 EVQEAM-EANALGL------------LSGAADWATPDLIEKFANNPRLCKFLSDPKFMKIVRALEQNPKATFASLQNEPELLASLNEFCSLMGDHFTKLDKEKQ--------DKESI--GPLAKEALERHSIGWD----SNVSKEEQDKVNKILADRDLSRILMDPEMQVIIKECNEPGQMLKYMRDSVYGPKLRQLINAGLL 451
BLAST of mRNA_H-paniculata_contig1902.4766.1 vs. uniprot
Match: A0A7S3ZLE6_9STRA (Hypothetical protein n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZLE6_9STRA) HSP 1 Score: 93.2 bits (230), Expect = 4.930e-17 Identity = 95/325 (29.23%), Postives = 146/325 (44.92%), Query Frame = 3
Query: 372 EPSLMEQMMTEAMAAREEGMKKEQTKNRDRAKKDFG----KGLKKGFLGGGSSAVARNRKAKAGAREAKRDSIPTITGRKTTSGSRSELEFDLSIKASTSSSNPGLVLPEVQEAMNEANQNNLGSSSNNKSNSHGLA----GTEWLTPELLDKISQRPRLAAMLMNPRFAQAMQLMSTSPQEAKALFASSPEAQETFSQLSTLLAEHFTTMGKAADARAAAADA---DRRKVADGPLAQEALRKAAAGVGIAATTKPSPA----EKADVERVLEQPELRELLMDPGMQRVLQECEQPSNLAQYMRHPEFGPKLQLMARAGLVSFR 1301
EPSL + MM +A+ + E K K R KK FG KGLKKGF S+ + K K +E D +PTIT +S PG V+ ++E + +S+ + H LA G EW+TP+L+ ++++RP LA + NP++ A+Q + P+ F S PE + ++ ++ H + DA + A ++ K GPL + A G G P P E+ +V+ VL+ ELRELLM+P Q ++Q C P + MR P + + +AGLV +
Sbjct: 54 EPSLADLMMGDALQNKAERAAKT-AKEEKRMKKSFGDGMKKGLKKGFFDKKPSSKKQPAKPKXXXKE---DEMPTITR--------------------SSKKEPGEVMQSMKEEI----------ASSMAQDRHPLAAALQGGEWVTPDLIKEMAKRPVLAKGMSNPKYQAALQELQKDPKNGAKKFDSDPELKRFLTEFCEVMGSHMIKLAGDEDAPKPSTPALPTEKEKKEMGPLCSQIAEDCANGKG------PEPCKTKKEQDEVDAVLKNEELRELLMNPKTQELMQRCSDPRAFQEAMRDPANRAIIGKLEQAGLVQLQ 338
BLAST of mRNA_H-paniculata_contig1902.4766.1 vs. uniprot
Match: A0A5D6XKE5_9STRA (Uncharacterized protein n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XKE5_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 3.310e-16 Identity = 89/320 (27.81%), Postives = 144/320 (45.00%), Query Frame = 3
Query: 369 QEPSLMEQMMTEAMAAREEGMKKEQTKNRDRAKKDFGKGLKKGFL---------GGGSSAVARNRKAKAGAREAKRDSIPTITGRKTTSGSRSELEFDLSIKASTSSSNPGLVLPEVQEAMNEANQNNLGSSSNNKSNSHGLAGTEWLTPELLDKISQRPRLAAMLMNPRFAQAMQLMSTSPQEAKALFASSPEAQETFSQLSTLLAEHFTTMGKAADARAAAADADRRKVADGPLAQEALRKAAAGVGIAATTKPSPAEKADVERVLEQPELRELLMDPGMQRVLQEC-EQPSNLAQYMRHPEFGPKLQLMARAGLVSF 1298
++ SLM++M+ A A+E+ ++++ + RA FG+GLKKGF G G++A KA + A + +PT + + + + + S+ V PEVQ A+ NQ + +L++K+++ PRL L NPRF QA+ M P+ A + + P + HF +GK +A A+ ++++ D E R A AG+ + SP E A V+++L+ PEL + L D + LQ C E P L + P KL+L+A AGLV F
Sbjct: 44 EDASLMDEMVAVAQRAKEQTRRRQEKERNSRA---FGQGLKKGFFNAKPRTREGGAGTAATTLTPKAASAAHK----KLPTREDLLIVKQNDKGDDANATPSSXXXXSDSRFVFPEVQSALKSVNQ------------------LDPKDAKLIEKLAKNPRLVLALQNPRFTQAIDEMQREPEAAIRKYRNDPAVSAMLQDFLGFMGSHFEELGKEQEAAAS-----KQRIVD---LDETRRAAIAGM------ERSPEEDAQVQKILQSPELLQALSDADLMARLQRCRESPQELLRLQSDPSLRHKLRLLADAGLVRF 324
BLAST of mRNA_H-paniculata_contig1902.4766.1 vs. uniprot
Match: W4GNU8_9STRA (Uncharacterized protein n=3 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GNU8_9STRA) HSP 1 Score: 88.2 bits (217), Expect = 9.870e-16 Identity = 64/206 (31.07%), Postives = 92/206 (44.66%), Query Frame = 3
Query: 675 LVLPEVQEAMNEANQNNLGSSSNNKSNSHGLAGTEWLTPELLDKISQRPRLAAMLMNPRFAQAMQLMSTSPQEAKALFASSPEAQETFSQLSTLLAEHFTTMGKAADARAAAADADRRKVADGPLAQEALRKAAAGVGIAATTKPSPAEKADVERVLEQPELRELLMDPGMQRVLQECEQPSNLAQYMRHPEFGPKLQLMARAGLV 1292
L LPEV +AMN+ L +W+TP +K+ + P+L + NPRF A+Q MST+P A + + P+ F + HF +GK + A P + R+A + SP E A V+R+L PEL VL+ C+ P L++YM FGPK+Q +ARAGLV
Sbjct: 102 LHLPEVHDAMNQM---------------QNLKPEDWMTPAFFEKLGRNPKLCQAMKNPRFTAAIQEMSTNPTAAILKYQNDPDFGVMFKDFLQFMGHHFEELGKIEEKTAI------------PTRDDIQRQALTSMSR------SPEEDAVVQRILADPELXXXXXXXXXXXVLRACQVPGVLSKYMNDKVFGPKIQKLARAGLV 274
BLAST of mRNA_H-paniculata_contig1902.4766.1 vs. uniprot
Match: A0A3R7K2X1_9STRA (Uncharacterized protein n=4 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3R7K2X1_9STRA) HSP 1 Score: 89.4 bits (220), Expect = 1.010e-15 Identity = 89/336 (26.49%), Postives = 138/336 (41.07%), Query Frame = 3
Query: 378 SLMEQMMTEAMAAREEGMKKEQTKNRDRAKKDFGKGLKKGFLGGGSSAVARNRKAKAGAREAKRDSIPTITGRKTTSGSRSELEFDLSIKASTSSSNPGLVLPEVQEAMNEANQNNLGSSSNNKSNSHGLAGTEWLTPELLDKISQRPRLAAMLMNPRFAQAMQLMSTSPQEAKALFASSPEAQETFSQLSTLLAEHFTTMGKAADARAAAADADRRKVADGPLAQ--------------------------EALRKAAAGVGIAATTKPSPAEKADVERVLEQPELRELLMDPGMQRVLQECEQ-PSNLAQYMRHPEFGPKLQLMARAGLVSFRS 1304
S+M++MM A A+E K + ++++R K FG+GLKKGF + K+ A S + + ++ P V PEVQEAM NQ L EW+ +K+++ P+LA L NP F+ A+ M P+ A + P L HF +G +++A A + +++ G Q +A R+A AG+ K SP E+A V+R+L+ PEL L D + + L C+Q P L + + P GPKL+L+ + LV F S
Sbjct: 41 SIMDEMMAVAQRAKEA---KHKQQHKERNHKSFGQGLKKGFFNSSGTKKKTKTLVKSAAMLEPTQXXXXXXX----------XXXXKSNEEKSPAAEPTFVFPEVQEAMKSMNQ---------------LDPKEWMNERFFEKLARNPKLAQALQNPAFSTAIAEMQQDPRAAVLKYQKDPAVSTMLRDFMEFLGNHFEELGASSEAANATNQSPQQQQKHGDPLQGIRAQHGNSTASAPKSPAPPAIVDLDDARRQAIAGM------KHSPEEEAQVQRILQSPELLNALSDATLMQRLHTCQQSPQQLQRLAQDPVLGPKLRLLVQHNLVQFAS 342
BLAST of mRNA_H-paniculata_contig1902.4766.1 vs. uniprot
Match: A0A662Y3Y0_9STRA (Uncharacterized protein n=2 Tax=Nothophytophthora sp. Chile5 TaxID=2483409 RepID=A0A662Y3Y0_9STRA) HSP 1 Score: 83.6 bits (205), Expect = 9.480e-14 Identity = 91/331 (27.49%), Postives = 133/331 (40.18%), Query Frame = 3
Query: 369 QEPSLMEQMMTEAMAAREEGMKKEQTKNRDRAKKDFGKGLKKGFLGGGSSAVARNRKAKAGAREAKRDSIPTITGRKTTSGSRSELEFDLSIKASTSSSNPGLVLPEVQEAMNEANQNNLGSSSNNKSNSHGLAGTEWLTPELLDKISQRPRLAAMLMNPRFAQAMQLMSTSPQEAKALFASSPEAQETFSQLSTLLAEHFTTMGKAADARAAAADADRRKVADG--------PLAQEALRKAAAGVGIA----------ATTKPSPAEKADVERVLEQPELRELLMDPGMQRVLQECEQ-PSNLAQYMRHPEFGPKLQLMARAGLVSFRS 1304
++ SLM++M+ A A+E +KEQ K R+R K FG+GLKKGF + T ++ V PEVQEA+ NQ N + + S W+ +K+S+ P+LA L NP F QA+ M P+ A + P L HF + A + + +DG PLA+ A A I A + +P E+A V+R+L+ PEL L D + + L C+Q P L + R P GPKL+L+A+ LV+F S
Sbjct: 34 EDESLMDEMVAIAQTAKE-AKRKEQEKERNR--KSFGQGLKKGFFNTSAXXXXXXXXXX--------XXXXXXXXXXXXXXXXXXXXXXXXXXXKTEPADSTFVFPEVQEALQSVNQLNP-NGLDQALQSPSRLSARWMNERFFEKLSRNPKLAQALQNPAFTQAIAEMQQDPRAAVLKYQKDPAVSTMLQDFMAFLGSHFEEVKAHMGEAEAQKTPSQPQQSDGHQGERKLQPLAESAASSAQKPPAIVDLDAKRREAIANMQRTPEEEAQVQRILQNPELMTALSDEKLMQQLHACQQAPEQLQRLARDPVLGPKLRLLAQHKLVTFAS 352 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1902.4766.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 21
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1902.4766.1 >prot_H-paniculata_contig1902.4766.1 ID=prot_H-paniculata_contig1902.4766.1|Name=mRNA_H-paniculata_contig1902.4766.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=426bp MILRGSQTDPGLEPPAPTHGSREANTKTHINQEKLDISAPIGTRRTLTPDback to top mRNA from alignment at H-paniculata_contig1902:3721..6132- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1902.4766.1 ID=mRNA_H-paniculata_contig1902.4766.1|Name=mRNA_H-paniculata_contig1902.4766.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2412bp|location=Sequence derived from alignment at H-paniculata_contig1902:3721..6132- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1902:3721..6132- >mRNA_H-paniculata_contig1902.4766.1 ID=mRNA_H-paniculata_contig1902.4766.1|Name=mRNA_H-paniculata_contig1902.4766.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2556bp|location=Sequence derived from alignment at H-paniculata_contig1902:3721..6132- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |