mRNA_H-paniculata_contig19.4753.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig19.4753.1 vs. uniprot
Match: A0A6H5JDA0_9PHAE (PhoLip_ATPase_N domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JDA0_9PHAE) HSP 1 Score: 142 bits (359), Expect = 5.300e-42 Identity = 69/86 (80.23%), Postives = 80/86 (93.02%), Query Frame = 1
Query: 1 MADNVVRTSKYNLITFVPRSLFEQFRRVANVYFLVIIILMMIGWYTELFTSPLSPYSTLIPLVIVLLVTMVKDGAEDLKRHKSDKR 258
MADN V TSKYN+ITFVPRSLFEQFRR+ANVYFLVI +LMM+GWYT+LF SPL+P+STLIPL++VL VTM+KDGAEDLKRH+SD R
Sbjct: 32 MADNSVVTSKYNVITFVPRSLFEQFRRIANVYFLVISVLMMLGWYTDLFESPLAPFSTLIPLILVLSVTMIKDGAEDLKRHRSDNR 117
BLAST of mRNA_H-paniculata_contig19.4753.1 vs. uniprot
Match: D8LGJ4_ECTSI (Phospholipid-transporting ATPase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LGJ4_ECTSI) HSP 1 Score: 146 bits (369), Expect = 9.790e-39 Identity = 72/94 (76.60%), Postives = 84/94 (89.36%), Query Frame = 1
Query: 1 MADNVVRTSKYNLITFVPRSLFEQFRRVANVYFLVIIILMMIGWYTELFTSPLSPYSTLIPLVIVLLVTMVKDGAEDLKRHKSDKRVSEREIVA 282
MADN V TSKYN+ITFVPRSLFEQFRR+ANVYFLVI +LMM+GWYT+LF SPL+P+ST+IPL++VL VTMVKDGAEDLKRH+SD RV+ E A
Sbjct: 32 MADNSVVTSKYNVITFVPRSLFEQFRRIANVYFLVISVLMMLGWYTDLFESPLAPFSTIIPLILVLSVTMVKDGAEDLKRHRSDNRVNNTEATA 125
BLAST of mRNA_H-paniculata_contig19.4753.1 vs. uniprot
Match: A0A836CHZ9_9STRA (Phospholipid-transporting ATPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CHZ9_9STRA) HSP 1 Score: 125 bits (314), Expect = 2.580e-31 Identity = 61/91 (67.03%), Postives = 77/91 (84.62%), Query Frame = 1
Query: 7 DNVVRTSKYNLITFVPRSLFEQFRRVANVYFLVIIILMMIGWYTELFTSPLSPYSTLIPLVIVLLVTMVKDGAEDLKRHKSDKRVSEREIV 279
DN + T+KYNLITF+PRSLFEQFRR AN+YFLVI +LM++G YT LF SPL+P+STLIPLV+VL++TM K+G EDLKRH+SD V+ R +
Sbjct: 129 DNSIDTAKYNLITFLPRSLFEQFRRAANIYFLVISVLMVLGTYTSLFNSPLTPFSTLIPLVMVLVITMGKEGIEDLKRHRSDHLVNNRRMA 219
BLAST of mRNA_H-paniculata_contig19.4753.1 vs. uniprot
Match: A0A7S4DIG8_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DIG8_HETAK) HSP 1 Score: 116 bits (290), Expect = 1.850e-30 Identity = 56/84 (66.67%), Postives = 72/84 (85.71%), Query Frame = 1
Query: 4 ADNVVRTSKYNLITFVPRSLFEQFRRVANVYFLVIIILMMIGWYTELFTSPLSPYSTLIPLVIVLLVTMVKDGAEDLKRHKSDK 255
A N V T+KYNL+TF+PR+LFEQFRR+ANVYFLVI ILM+IG YT+ F SP++P+ST+ PLVI++ + M K+G EDLKRH+SDK
Sbjct: 58 ATNAVHTAKYNLVTFLPRALFEQFRRLANVYFLVISILMIIGTYTDYFDSPVTPWSTIGPLVIMITIIMAKEGMEDLKRHQSDK 141
BLAST of mRNA_H-paniculata_contig19.4753.1 vs. uniprot
Match: A0A7S1CBW1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CBW1_9STRA) HSP 1 Score: 111 bits (277), Expect = 2.250e-28 Identity = 59/88 (67.05%), Postives = 72/88 (81.82%), Query Frame = 1
Query: 10 NVVRTSKYNLITFVPRSLFEQFRRVANVYFLVIIILMMIGWYTE-LFTSPLSPYSTLIPLVIVLLVTMVKDGAEDLKRHKSDKRVSER 270
N V T KYNL+TF+PRSLFEQFRR+AN YFLVI ILM+IG +F SPLSPYSTL PLV+VL +T+VK+GAEDLKR ++D+ V+ R
Sbjct: 64 NAVSTQKYNLVTFLPRSLFEQFRRLANCYFLVISILMLIGTENPAIFDSPLSPYSTLGPLVLVLTITIVKEGAEDLKRFRADREVNAR 151
BLAST of mRNA_H-paniculata_contig19.4753.1 vs. uniprot
Match: W7TQX5_9STRA (Phospholipid-transporting ATPase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQX5_9STRA) HSP 1 Score: 115 bits (288), Expect = 8.320e-28 Identity = 53/88 (60.23%), Postives = 73/88 (82.95%), Query Frame = 1
Query: 7 DNVVRTSKYNLITFVPRSLFEQFRRVANVYFLVIIILMMIGWYTELFTSPLSPYSTLIPLVIVLLVTMVKDGAEDLKRHKSDKRVSER 270
DN V T+KYNL TF+PR+LFEQFRR+AN+YFLV+ +LM+IG Y++ + SPL+PY+TLIPL +VL +TM K+ EDLKRH +D++ + R
Sbjct: 114 DNSVSTAKYNLFTFIPRALFEQFRRLANIYFLVVTVLMLIGTYSDFYESPLTPYTTLIPLCVVLTITMGKEAFEDLKRHTADQKTNNR 201
BLAST of mRNA_H-paniculata_contig19.4753.1 vs. uniprot
Match: A0A8J2SPA8_9STRA (Phospholipid-transporting ATPase n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SPA8_9STRA) HSP 1 Score: 113 bits (282), Expect = 5.320e-27 Identity = 55/86 (63.95%), Postives = 70/86 (81.40%), Query Frame = 1
Query: 7 DNVVRTSKYNLITFVPRSLFEQFRRVANVYFLVIIILMMIGWYTELFTSPLSPYSTLIPLVIVLLVTMVKDGAEDLKRHKSDKRVS 264
DN VRT KYNL+ F P+S+FEQ RR AN YFL+I I+M +G YT F SPL+P+ST +PL+I+LLVTM K+G ED+KRH+SDKRV+
Sbjct: 36 DNGVRTYKYNLLNFFPKSMFEQMRRTANQYFLLICIMMFLGTYTTWFYSPLTPWSTFLPLMIILLVTMAKEGFEDVKRHQSDKRVN 121
BLAST of mRNA_H-paniculata_contig19.4753.1 vs. uniprot
Match: F0YJC7_AURAN (Phospholipid-transporting ATPase n=2 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJC7_AURAN) HSP 1 Score: 112 bits (279), Expect = 1.350e-26 Identity = 55/90 (61.11%), Postives = 72/90 (80.00%), Query Frame = 1
Query: 4 ADNVVRTSKYNLITFVPRSLFEQFRRVANVYFLVIIILMMIGWYTELFTSPLSPYSTLIPLVIVLLVTMVKDGAEDLKRHKSDKRVSERE 273
+DN + T KYN +TF+PRSLFEQFRR AN YFL+I +LM+IG YT+LF SPL+ +ST+ PL ++L +TM K+G EDLKRHKSD+ V+ E
Sbjct: 44 SDNSITTHKYNALTFLPRSLFEQFRRTANQYFLLISLLMIIGTYTDLFYSPLTAWSTIGPLSLILAITMTKEGIEDLKRHKSDEHVNNSE 133
BLAST of mRNA_H-paniculata_contig19.4753.1 vs. uniprot
Match: W7TGI1_9STRA (Phospholipid-transporting ATPase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TGI1_9STRA) HSP 1 Score: 111 bits (278), Expect = 1.850e-26 Identity = 54/83 (65.06%), Postives = 71/83 (85.54%), Query Frame = 1
Query: 7 DNVVRTSKYNLITFVPRSLFEQFRRVANVYFLVIIILMMIGWYTELFTSPLSPYSTLIPLVIVLLVTMVKDGAEDLKRHKSDK 255
+N V TSKY +++F P+SLFEQFRR+ANVYFLVIIIL+M+G YT LF +PL+PY+TL PL++VL VTM K+G ED+KRH +D+
Sbjct: 40 NNSVSTSKYTVLSFFPKSLFEQFRRLANVYFLVIIILLMLGTYTPLFDAPLTPYTTLFPLLVVLAVTMGKEGFEDVKRHIADR 122
BLAST of mRNA_H-paniculata_contig19.4753.1 vs. uniprot
Match: A0A482UDJ0_9ARCH (PhoLip_ATPase_N domain-containing protein (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482UDJ0_9ARCH) HSP 1 Score: 108 bits (269), Expect = 4.630e-26 Identity = 56/89 (62.92%), Postives = 69/89 (77.53%), Query Frame = 1
Query: 7 DNVVRTSKYNLITFVPRSLFEQFRRVANVYFLVIIILMMIGWY-TELFTSPLSPYSTLIPLVIVLLVTMVKDGAEDLKRHKSDKRVSER 270
DN + TSKY I+F+PRSLFEQFRR+ANVYF I I+M IG Y ++F SPLSPYSTL PL +VL +TM+K+G ED KRH+SD V+ R
Sbjct: 149 DNFITTSKYTWISFIPRSLFEQFRRIANVYFFGISIVMFIGTYFPKVFESPLSPYSTLGPLCLVLAITMLKEGIEDFKRHRSDHEVNNR 237 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig19.4753.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig19.4753.1 >prot_H-paniculata_contig19.4753.1 ID=prot_H-paniculata_contig19.4753.1|Name=mRNA_H-paniculata_contig19.4753.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=101bp MADNVVRTSKYNLITFVPRSLFEQFRRVANVYFLVIIILMMIGWYTELFTback to top mRNA from alignment at H-paniculata_contig19:12342..12644- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig19.4753.1 ID=mRNA_H-paniculata_contig19.4753.1|Name=mRNA_H-paniculata_contig19.4753.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=303bp|location=Sequence derived from alignment at H-paniculata_contig19:12342..12644- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig19:12342..12644- >mRNA_H-paniculata_contig19.4753.1 ID=mRNA_H-paniculata_contig19.4753.1|Name=mRNA_H-paniculata_contig19.4753.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=606bp|location=Sequence derived from alignment at H-paniculata_contig19:12342..12644- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |