mRNA_H-paniculata_contig18805.4678.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig18805.4678.1 vs. uniprot
Match: T2MJ92_HYDVU (Heat shock 70 kDa protein 12A n=1 Tax=Hydra vulgaris TaxID=6087 RepID=T2MJ92_HYDVU) HSP 1 Score: 63.5 bits (153), Expect = 8.690e-10 Identity = 35/81 (43.21%), Postives = 48/81 (59.26%), Query Frame = 1
Query: 22 PLLRVTVAVLRRFKEDALSQLASVNVVALGVEDVTWVVTILAVYDDFGKCFMCVAAHEVGIISPVDSSPLQFCLEPEAASL 264
P L+V L+ FKE L++L+ + L ED+TWV+T+ A++ K FM AA+E GI SP L LEPEAAS+
Sbjct: 458 PALKVFTYALKFFKEHVLAELSDQSTAQLCEEDITWVLTVPAIWRQPAKQFMRTAAYEAGIASPAHPDRLLIALEPEAASI 538
BLAST of mRNA_H-paniculata_contig18805.4678.1 vs. uniprot
Match: A0A7M5X6R9_9CNID (Uncharacterized protein n=2 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M5X6R9_9CNID) HSP 1 Score: 61.2 bits (147), Expect = 5.670e-9 Identity = 36/88 (40.91%), Postives = 49/88 (55.68%), Query Frame = 1
Query: 1 AETKQSTPLLRVTVAVLRRFKEDALSQLASVNVVALGVEDVTWVVTILAVYDDFGKCFMCVAAHEVGIISPVDSSPLQFCLEPEAASL 264
A ++ P L+V LR FK+ L +L+ + L ED+TWVVT+ A++ K FM AA+E GI S L LEPEAAS+
Sbjct: 568 AANGKAYPALKVFAHALRFFKQHVLEELSDQSTAKLSEEDITWVVTVPAIWRQPAKQFMRTAAYEAGIASLSHPDRLLIALEPEAASI 655
BLAST of mRNA_H-paniculata_contig18805.4678.1 vs. uniprot
Match: UPI0010A03E60 (heat shock 70 kDa protein 12A-like isoform X1 n=2 Tax=Erpetoichthys calabaricus TaxID=27687 RepID=UPI0010A03E60) HSP 1 Score: 58.9 bits (141), Expect = 3.580e-8 Identity = 34/82 (41.46%), Postives = 49/82 (59.76%), Query Frame = 1
Query: 22 PLLRVTVAVLRRFKEDALSQL-ASVNVVALGVEDVTWVVTILAVYDDFGKCFMCVAAHEVGIISPVDSSPLQFCLEPEAASL 264
P L V L+ K+ AL + + +++ EDVTWV+T+ A+++ K FM VAA E G+I +DS L LEPEAAS+
Sbjct: 108 PALMVFSESLQYLKDHALKTINVTDDIIKYTAEDVTWVLTVPAIWEPAAKQFMRVAAQEAGLIKSIDSENLVIALEPEAASM 189
BLAST of mRNA_H-paniculata_contig18805.4678.1 vs. uniprot
Match: A0A8C6Z0P1_NOTPE (Heat shock 70 kDa protein 12A-like n=5 Tax=Nothoprocta perdicaria TaxID=30464 RepID=A0A8C6Z0P1_NOTPE) HSP 1 Score: 58.5 bits (140), Expect = 4.930e-8 Identity = 38/89 (42.70%), Postives = 51/89 (57.30%), Query Frame = 1
Query: 1 AETKQSTPLLRVTVAVLRRFKEDALSQLASVNVVAL-GVEDVTWVVTILAVYDDFGKCFMCVAAHEVGIISPVDSSPLQFCLEPEAASL 264
A + P L+V LR E ALS + S + + G DVTWV+T+ A+++ K FM +AA E G+IS + S L LEPEAASL
Sbjct: 171 ASNGKKLPALKVFSESLRYMMEHALSNIESASFQKVCGCSDVTWVLTVPAIWNAAAKQFMRLAAKEAGLISDMLSEKLIIALEPEAASL 259
BLAST of mRNA_H-paniculata_contig18805.4678.1 vs. uniprot
Match: A0A7K7WM34_9AVES (HS12B protein (Fragment) n=6 Tax=Tinamidae TaxID=8803 RepID=A0A7K7WM34_9AVES) HSP 1 Score: 57.0 bits (136), Expect = 6.280e-8 Identity = 37/89 (41.57%), Postives = 51/89 (57.30%), Query Frame = 1
Query: 1 AETKQSTPLLRVTVAVLRRFKEDALSQLASVNVVALGVE-DVTWVVTILAVYDDFGKCFMCVAAHEVGIISPVDSSPLQFCLEPEAASL 264
A + P L+V LR E ALS + S + + V +VTWV+T+ A+++ K FM +AA E G+IS + S L LEPEAASL
Sbjct: 97 ASNGKKLPALKVFSESLRYMMEHALSNIESASFQTVCVHNEVTWVITVPAIWNAAAKQFMRLAAKEAGLISDMLSEKLVIALEPEAASL 185
BLAST of mRNA_H-paniculata_contig18805.4678.1 vs. uniprot
Match: UPI0013F22A75 (heat shock 70 kDa protein 12B-like isoform X2 n=1 Tax=Chelonoidis abingdonii TaxID=106734 RepID=UPI0013F22A75) HSP 1 Score: 57.4 bits (137), Expect = 1.190e-7 Identity = 36/89 (40.45%), Postives = 52/89 (58.43%), Query Frame = 1
Query: 1 AETKQSTPLLRVTVAVLRRFKEDALSQ-LASVNVVALGVEDVTWVVTILAVYDDFGKCFMCVAAHEVGIISPVDSSPLQFCLEPEAASL 264
A+ + P L+V LR K+ AL+ L + + EDVTWV+T+ A++D + FM +AA E G+IS + S L LEPEAAS+
Sbjct: 106 ADNGKKFPALKVFSESLRYMKDHALNTILEASSQTVYDTEDVTWVITVPAIWDVSARQFMRLAAKEAGLISDMFSEKLIIALEPEAASV 194
BLAST of mRNA_H-paniculata_contig18805.4678.1 vs. uniprot
Match: M7C7L6_CHEMY (Heat shock 70 kDa protein 12A n=1 Tax=Chelonia mydas TaxID=8469 RepID=M7C7L6_CHEMY) HSP 1 Score: 57.4 bits (137), Expect = 1.240e-7 Identity = 35/82 (42.68%), Postives = 50/82 (60.98%), Query Frame = 1
Query: 22 PLLRVTVAVLRRFKEDALSQLASVNVVALGV-EDVTWVVTILAVYDDFGKCFMCVAAHEVGIISPVDSSPLQFCLEPEAASL 264
P L+V LR K+ AL+ + + + V EDVTWV+T+ A++D + FM +AA E G+IS + S L LEPEAAS+
Sbjct: 111 PALKVFSESLRYMKDHALNTIREASYQTVYVTEDVTWVITVPAIWDASARQFMRLAAKEAGLISDMFSEQLIIALEPEAASV 192
BLAST of mRNA_H-paniculata_contig18805.4678.1 vs. uniprot
Match: A0A8C8RBG9_9SAUR (Uncharacterized protein n=2 Tax=Pelusios castaneus TaxID=367368 RepID=A0A8C8RBG9_9SAUR) HSP 1 Score: 57.4 bits (137), Expect = 1.250e-7 Identity = 34/89 (38.20%), Postives = 52/89 (58.43%), Query Frame = 1
Query: 1 AETKQSTPLLRVTVAVLRRFKEDALSQLASVNVVAL-GVEDVTWVVTILAVYDDFGKCFMCVAAHEVGIISPVDSSPLQFCLEPEAASL 264
A+ + P L+V LR K+ AL+ + + + EDVTWV+T+ A++D + FM +AA E G+I+ + S L LEPEAAS+
Sbjct: 135 ADNGKRFPALKVFSESLRYMKDHALNTIGEASYQTIYDTEDVTWVITVPAIWDTSARQFMRLAAKEAGLITDMFSEKLIIALEPEAASV 223
BLAST of mRNA_H-paniculata_contig18805.4678.1 vs. uniprot
Match: UPI00052240C3 (heat shock 70 kDa protein 12B-like n=2 Tax=Neognathae TaxID=8825 RepID=UPI00052240C3) HSP 1 Score: 57.0 bits (136), Expect = 1.710e-7 Identity = 35/89 (39.33%), Postives = 50/89 (56.18%), Query Frame = 1
Query: 1 AETKQSTPLLRVTVAVLRRFKEDALSQLASVNVVAL-GVEDVTWVVTILAVYDDFGKCFMCVAAHEVGIISPVDSSPLQFCLEPEAASL 264
A + P L V LR KE AL+ + + + G E++TWV+T+ A++ + FM +AA E G+IS + S L LEPEAASL
Sbjct: 104 ASNGKMLPALTVFTESLRYLKEHALNTIQEASFQTICGPEEITWVITVPAIWSAAARQFMRLAAKEAGLISDMISEKLIIALEPEAASL 192
BLAST of mRNA_H-paniculata_contig18805.4678.1 vs. uniprot
Match: A0A8C3IAT1_CHRPI (Uncharacterized protein n=16 Tax=Durocryptodira TaxID=1579337 RepID=A0A8C3IAT1_CHRPI) HSP 1 Score: 57.0 bits (136), Expect = 1.710e-7 Identity = 35/89 (39.33%), Postives = 51/89 (57.30%), Query Frame = 1
Query: 1 AETKQSTPLLRVTVAVLRRFKEDALSQLASVNVVAL-GVEDVTWVVTILAVYDDFGKCFMCVAAHEVGIISPVDSSPLQFCLEPEAASL 264
A+ + P L+V LR K+ AL+ + + + EDVTWV+T+ A++D + FM +AA E G IS + S L LEPEAAS+
Sbjct: 117 ADNGKKFPALKVFSESLRYMKDHALNTIRDTSYQTVYDTEDVTWVITVPAIWDASARQFMRLAAKEAGFISDMFSEKLIIALEPEAASV 205 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig18805.4678.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig18805.4678.1 >prot_H-paniculata_contig18805.4678.1 ID=prot_H-paniculata_contig18805.4678.1|Name=mRNA_H-paniculata_contig18805.4678.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=88bp AETKQSTPLLRVTVAVLRRFKEDALSQLASVNVVALGVEDVTWVVTILAVback to top mRNA from alignment at H-paniculata_contig18805:799..1062- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig18805.4678.1 ID=mRNA_H-paniculata_contig18805.4678.1|Name=mRNA_H-paniculata_contig18805.4678.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=264bp|location=Sequence derived from alignment at H-paniculata_contig18805:799..1062- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig18805:799..1062- >mRNA_H-paniculata_contig18805.4678.1 ID=mRNA_H-paniculata_contig18805.4678.1|Name=mRNA_H-paniculata_contig18805.4678.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=528bp|location=Sequence derived from alignment at H-paniculata_contig18805:799..1062- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |