prot_H-paniculata_contig18803.4677.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig18803.4677.1
Unique Nameprot_H-paniculata_contig18803.4677.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length236
Homology
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BLAST of mRNA_H-paniculata_contig18803.4677.1 vs. uniprot
Match: D7FPB0_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FPB0_ECTSI)

HSP 1 Score: 253 bits (645), Expect = 1.020e-79
Identity = 141/234 (60.26%), Postives = 161/234 (68.80%), Query Frame = 0 
Query:    1 MLQALERMVNSRRCESRLVDEGLIETLVSLCFNEIASFVHGCQHYLRQRQEIEGASVMGSNNASAAGQLPHVIGGGGDGHTRLQSGVGGGSRAGAGRSASMMSVGDVSVALGIGGRRRREADPRFTEEKLEVAMDVARTCMSMFANLAIRGYCQRALHAGVLAHINSVSIGDGDDPHMTGSLSQLVLELLVTALLSQADTLSFVAQGPLDAIMRCLKGGREGQQQCALDALAKV 234
            ML+ALERM  S RCE RL+DEGL E LV LCFNE+ASFVHGCQ+YLRQR+EIEG  V  S                        +           R  S++S G +S   G GGRR+ EA+ RFTEEKLEVAMDVARTCM+MFA+L  RG+ +RALHAGVLAHINSV IG GDDPHMTGSLSQLVL+L   A+  + + LSFV QGPLDAIMRCL+GGR  QQQCALDAL  V
Sbjct:    1 MLKALERMAGSPRCEKRLIDEGLFEALVGLCFNEVASFVHGCQNYLRQRREIEG--VFSSAXXXXXXXXXXXXXXXXXXXXXXXA-----------RCESIVSTGGMSAGAGAGGRRK-EAEGRFTEEKLEVAMDVARTCMAMFAHLTARGHGRRALHAGVLAHINSVPIGAGDDPHMTGSLSQLVLDLSAVAMEGEENRLSFVGQGPLDAIMRCLRGGRAAQQQCALDALTTV 220
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig18803.4677.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
D7FPB0_ECTSI1.020e-7960.26Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig18803contigH-paniculata_contig18803:153..4323 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig18803.4677.1mRNA_H-paniculata_contig18803.4677.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig18803 153..4332 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig18803.4677.1 ID=prot_H-paniculata_contig18803.4677.1|Name=mRNA_H-paniculata_contig18803.4677.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=236bp
MLQALERMVNSRRCESRLVDEGLIETLVSLCFNEIASFVHGCQHYLRQRQ
EIEGASVMGSNNASAAGQLPHVIGGGGDGHTRLQSGVGGGSRAGAGRSAS
MMSVGDVSVALGIGGRRRREADPRFTEEKLEVAMDVARTCMSMFANLAIR
GYCQRALHAGVLAHINSVSIGDGDDPHMTGSLSQLVLELLVTALLSQADT
LSFVAQGPLDAIMRCLKGGREGQQQCALDALAKVS*
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