prot_H-paniculata_contig18751.4655.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig18751.4655.1
Unique Nameprot_H-paniculata_contig18751.4655.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length109
Homology
[Close]
BLAST of mRNA_H-paniculata_contig18751.4655.1 vs. uniprot
Match: A0A6H5JG94_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JG94_9PHAE)

HSP 1 Score: 66.2 bits (160), Expect = 1.870e-10
Identity = 34/95 (35.79%), Postives = 55/95 (57.89%), Query Frame = 0 
Query:   11 LLPPVMSVSRIQHWFGHIKTIPEIDRLVSTVGEGVPVDV-TEGDDLTAELRYGNHTNADRHTPLVLDQVHPDLKYGRTLTFPLEMATSIPGLRIS 104
            ++ P +  + ++ +FG  K  P+I+ L++ +  GVPV   T   DL   LRYGNH++AD H PL+ +++  D++  R L      A  IP LR+S
Sbjct:   20 MVTPPVDPAAVRDYFGRRKGFPQIEELMTIITGGVPVITETSSTDLERALRYGNHSSADGHLPLLWEKLGNDVRRERCLVLEKTSAHEIPNLRVS 114
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig18751.4655.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 1
Match NameE-valueIdentityDescription
A0A6H5JG94_9PHAE1.870e-1035.79Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
back to top
Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig18751contigH-paniculata_contig18751:2568..2894 +
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig18751.4655.1mRNA_H-paniculata_contig18751.4655.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig18751 2508..3063 +


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig18751.4655.1 ID=prot_H-paniculata_contig18751.4655.1|Name=mRNA_H-paniculata_contig18751.4655.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=109bp
MAQMININRGLLPPVMSVSRIQHWFGHIKTIPEIDRLVSTVGEGVPVDVT
EGDDLTAELRYGNHTNADRHTPLVLDQVHPDLKYGRTLTFPLEMATSIPG
LRISLWAW*
back to top