prot_H-paniculata_contig18725.4641.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig18725.4641.1 vs. uniprot
Match: D7G5C0_ECTSI (Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G5C0_ECTSI) HSP 1 Score: 149 bits (375), Expect = 9.860e-45 Identity = 76/91 (83.52%), Postives = 78/91 (85.71%), Query Frame = 0
Query: 1 MKNGEIYRGHLNDAEDTMNCFMTGVTMTGRDGRVSKLEQVYLRGSHIKLMVLPDVLKNAPVFKPVQKMKSKVEESGGSRGGGFKKSKKPKA 91
MKNGEIYRGHLN+AEDTMNCFMTGVTMTGRDGRVSKLEQVYLRGSHIKL+VLPDVLKNAPVFKPVQKMK FKKSKKPKA
Sbjct: 23 MKNGEIYRGHLNEAEDTMNCFMTGVTMTGRDGRVSKLEQVYLRGSHIKLVVLPDVLKNAPVFKPVQKMKKXXXXXXXXXXXXFKKSKKPKA 113
BLAST of mRNA_H-paniculata_contig18725.4641.1 vs. uniprot
Match: A0A835ZED0_9STRA (Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZED0_9STRA) HSP 1 Score: 114 bits (286), Expect = 3.980e-31 Identity = 56/68 (82.35%), Postives = 61/68 (89.71%), Query Frame = 0
Query: 1 MKNGEIYRGHLNDAEDTMNCFMTGVTMTGRDGRVSKLEQVYLRGSHIKLMVLPDVLKNAPVFKPVQKM 68
MKNGEIYRG L +AEDTMN F+T VTMT RDGRVSKLEQVYLRGSHIK ++LPD+LKNAPVFK VQKM
Sbjct: 26 MKNGEIYRGRLMEAEDTMNSFITEVTMTARDGRVSKLEQVYLRGSHIKFIILPDLLKNAPVFKGVQKM 93
BLAST of mRNA_H-paniculata_contig18725.4641.1 vs. uniprot
Match: A0A6S9H3G1_HETAK (Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6S9H3G1_HETAK) HSP 1 Score: 111 bits (278), Expect = 5.670e-30 Identity = 54/88 (61.36%), Postives = 69/88 (78.41%), Query Frame = 0
Query: 1 MKNGEIYRGHLNDAEDTMNCFMTGVTMTGRDGRVSKLEQVYLRGSHIKLMVLPDVLKNAPVFKPVQKMKSKVEESGGSRGGGFKKSKK 88
+KNGEIYRG L++AEDTMNC M+ VT T R+G+VSKLE VY+RGSH+KL++LPD+L+NAPVFK VQ ++ K + RG G K KK
Sbjct: 25 LKNGEIYRGMLDEAEDTMNCAMSNVTFTARNGKVSKLESVYIRGSHVKLLILPDMLRNAPVFKKVQGLRGKNQTPAAGRGRGSFKRKK 112
BLAST of mRNA_H-paniculata_contig18725.4641.1 vs. uniprot
Match: A0A7S2S181_9STRA (Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2S181_9STRA) HSP 1 Score: 108 bits (270), Expect = 9.890e-29 Identity = 50/74 (67.57%), Postives = 62/74 (83.78%), Query Frame = 0
Query: 1 MKNGEIYRGHLNDAEDTMNCFMTGVTMTGRDGRVSKLEQVYLRGSHIKLMVLPDVLKNAPVFKPVQKMKSKVEE 74
++NGEIYRG L +AEDTMNCF+ VTMT RDGRVSKLEQVY+RGS +KL++LP+VLK++P F VQ MK K +E
Sbjct: 25 LRNGEIYRGTLKEAEDTMNCFLENVTMTARDGRVSKLEQVYIRGSQVKLIILPEVLKHSPAFNKVQTMKKKNDE 98
BLAST of mRNA_H-paniculata_contig18725.4641.1 vs. uniprot
Match: K3WSP0_GLOUD (Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WSP0_GLOUD) HSP 1 Score: 102 bits (255), Expect = 1.890e-26 Identity = 49/91 (53.85%), Postives = 68/91 (74.73%), Query Frame = 0
Query: 1 MKNGEIYRGHLNDAEDTMNCFMTGVTMTGRDGRVSKLEQVYLRGSHIKLMVLPDVLKNAPVFKPVQKMKS------KVEESGGSRGGGFKK 85
+KNGEIYRGHL ++ED+MNC ++ V +T RDG+ +KLEQVY+RGSHIKL++LPD+LKN+P+F VQ +K K S ++ GG +K
Sbjct: 24 LKNGEIYRGHLEESEDSMNCQLSNVVLTQRDGQKAKLEQVYVRGSHIKLIILPDILKNSPLFSKVQALKKPAAEKKKARSSAKTKRGGMRK 114
BLAST of mRNA_H-paniculata_contig18725.4641.1 vs. uniprot
Match: A0A485LB96_9STRA (Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485LB96_9STRA) HSP 1 Score: 102 bits (255), Expect = 2.110e-26 Identity = 46/81 (56.79%), Postives = 66/81 (81.48%), Query Frame = 0
Query: 1 MKNGEIYRGHLNDAEDTMNCFMTGVTMTGRDGRVSKLEQVYLRGSHIKLMVLPDVLKNAPVFKPVQKMKSKVEESGGSRGG 81
+KNGE+YRGHL ++ED+MNC + VT+TGRDG++S+LEQVY+RGS +KL +LPD+L+ +P+FK VQ +K + S S+GG
Sbjct: 24 LKNGEVYRGHLVESEDSMNCQLKQVTLTGRDGQISRLEQVYVRGSQVKLFILPDMLQKSPLFKKVQALKKPEKASRKSKGG 104
BLAST of mRNA_H-paniculata_contig18725.4641.1 vs. uniprot
Match: W7TQG3_9STRA (Small nuclear ribonucleoprotein Sm D3 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQG3_9STRA) HSP 1 Score: 100 bits (248), Expect = 2.510e-25 Identity = 51/90 (56.67%), Postives = 68/90 (75.56%), Query Frame = 0
Query: 1 MKNGEIYRGHLNDAEDTMNCFMTGVTMTGRDGRVSKLEQVYLRGSHIKLMVLPDVLKNAPVFKPVQKMKSKVEE--SGGSRGGGFKKSKK 88
+K+GE+YRG L ++EDTMN ++ VT T R+G+V KLEQVYLRGSH+K +VLP++LK+APVFK VQ MK K +G RGG F+ K+
Sbjct: 26 LKSGEVYRGLLMESEDTMNVHLSDVTHTARNGKVRKLEQVYLRGSHLKFIVLPEILKHAPVFKKVQGMKKKESSKTAGRGRGGAFRGKKR 115
BLAST of mRNA_H-paniculata_contig18725.4641.1 vs. uniprot
Match: T0QL39_SAPDV (Small nuclear ribonucleoprotein Sm D3 n=2 Tax=Saprolegnia TaxID=4769 RepID=T0QL39_SAPDV) HSP 1 Score: 99.0 bits (245), Expect = 6.070e-25 Identity = 42/69 (60.87%), Postives = 60/69 (86.96%), Query Frame = 0
Query: 1 MKNGEIYRGHLNDAEDTMNCFMTGVTMTGRDGRVSKLEQVYLRGSHIKLMVLPDVLKNAPVFKPVQKMK 69
+KNGEIY+GHL +AED+MNC + VT+TGRDG++S+LEQVY+RGS +KL +LPD+L+ +P+FK +Q +K
Sbjct: 24 LKNGEIYKGHLMEAEDSMNCQLKDVTLTGRDGQLSRLEQVYIRGSQVKLFILPDMLQKSPLFKKIQALK 92
BLAST of mRNA_H-paniculata_contig18725.4641.1 vs. uniprot
Match: A0A1V9ZC26_9STRA (Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZC26_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 6.070e-25 Identity = 43/69 (62.32%), Postives = 60/69 (86.96%), Query Frame = 0
Query: 1 MKNGEIYRGHLNDAEDTMNCFMTGVTMTGRDGRVSKLEQVYLRGSHIKLMVLPDVLKNAPVFKPVQKMK 69
+KNGEIY+GHL +AED+MNC + VT+TGRDG++S+LEQVY+RGS +KL +LPD+L+ +P+FK VQ +K
Sbjct: 24 LKNGEIYKGHLLEAEDSMNCQLKDVTLTGRDGQLSRLEQVYIRGSQVKLFILPDMLQKSPLFKKVQALK 92
BLAST of mRNA_H-paniculata_contig18725.4641.1 vs. uniprot
Match: A0A5D6XZW3_9STRA (Small nuclear ribonucleoprotein Sm D3 n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6XZW3_9STRA) HSP 1 Score: 98.2 bits (243), Expect = 1.620e-24 Identity = 46/74 (62.16%), Postives = 58/74 (78.38%), Query Frame = 0
Query: 1 MKNGEIYRGHLNDAEDTMNCFMTGVTMTGRDGRVSKLEQVYLRGSHIKLMVLPDVLKNAPVFKPVQKMKSKVEE 74
+KNGEIYRGHL ++ED+MNC M V +T RDG+ KLEQVY+RGSHIKL++LPDVLKN+P+ VQ +K E
Sbjct: 25 LKNGEIYRGHLLESEDSMNCQMRDVVLTQRDGQKRKLEQVYVRGSHIKLVILPDVLKNSPLLAKVQALKKPAAE 98 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig18725.4641.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topInterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
Alignments
The following features are aligned
Analyses
This polypeptide is derived from or has results from the following analyses
Relationships
This polypeptide derives from the following mRNA feature(s):
Sequences
The following sequences are available for this feature:
polypeptide sequence >prot_H-paniculata_contig18725.4641.1 ID=prot_H-paniculata_contig18725.4641.1|Name=mRNA_H-paniculata_contig18725.4641.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=92bpback to top |