mRNA_H-paniculata_contig18646.4613.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig18646.4613.1 vs. uniprot
Match: A0A8F0K273_9PHAE (Ribosomal protein S19 n=1 Tax=Protohalopteris sp. TaxID=2843287 RepID=A0A8F0K273_9PHAE) HSP 1 Score: 153 bits (386), Expect = 8.800e-47 Identity = 74/88 (84.09%), Postives = 81/88 (92.05%), Query Frame = 1
Query: 1 MPRSKWKTPFIDKSLFKRLNFEYENQPTWSRRSTIYPALVGLELPIHNGKEMVTRKITPQMVGHKLGEFVTTRKSFYKKLKRGGEKNK 264
MPRSKWKTPFIDKSLFKRL+FE ENQPTWSRRSTIYPA+VGL+LPI+NGKEMVTRKIT QMVGHKLGEFV TRKSF +K + GG+K K
Sbjct: 1 MPRSKWKTPFIDKSLFKRLDFECENQPTWSRRSTIYPAIVGLQLPIYNGKEMVTRKITSQMVGHKLGEFVPTRKSFIQKKRGGGKKKK 88
BLAST of mRNA_H-paniculata_contig18646.4613.1 vs. uniprot
Match: Q94Z05_PYLLI (Ribosomal protein S19 n=1 Tax=Pylaiella littoralis TaxID=2885 RepID=Q94Z05_PYLLI) HSP 1 Score: 132 bits (332), Expect = 1.470e-38 Identity = 64/86 (74.42%), Postives = 73/86 (84.88%), Query Frame = 1
Query: 1 MPRSKWKTPFIDKSLFKRLNFEYENQPTWSRRSTIYPALVGLELPIHNGKEMVTRKITPQMVGHKLGEFVTTRKSFYKKLKRGGEK 258
M RS WKTPFIDKSL KRL ++E +PTWSRRSTIYPA VGL+LPIHNGK MVTRKI +MVGHKLGEFVTTRK+F K+K+G +K
Sbjct: 1 MSRSNWKTPFIDKSLLKRLKPDHEKKPTWSRRSTIYPAAVGLKLPIHNGKNMVTRKIKSEMVGHKLGEFVTTRKTFKPKIKKGLKK 86
BLAST of mRNA_H-paniculata_contig18646.4613.1 vs. uniprot
Match: A0A1I9LWB1_9PHAE (Ribosomal protein S19 n=1 Tax=Pleurocladia lacustris TaxID=246121 RepID=A0A1I9LWB1_9PHAE) HSP 1 Score: 127 bits (319), Expect = 1.450e-36 Identity = 60/82 (73.17%), Postives = 70/82 (85.37%), Query Frame = 1
Query: 1 MPRSKWKTPFIDKSLFKRLNFEYENQPTWSRRSTIYPALVGLELPIHNGKEMVTRKITPQMVGHKLGEFVTTRKSFYKKLKR 246
MPRS WKTPFIDKSL KRL +E +PTWSRRSTIYPA +GL+L I+NGK+M+TRKI P+MVGHKLGEFVTTRK+F K K+
Sbjct: 1 MPRSNWKTPFIDKSLLKRLTPGHEKKPTWSRRSTIYPAAIGLKLNIYNGKDMITRKIKPEMVGHKLGEFVTTRKTFIPKKKK 82
BLAST of mRNA_H-paniculata_contig18646.4613.1 vs. uniprot
Match: Q8LWZ8_9PHAE (Ribosomal protein S19 n=50 Tax=Phaeophyceae TaxID=2870 RepID=Q8LWZ8_9PHAE) HSP 1 Score: 126 bits (317), Expect = 2.940e-36 Identity = 63/89 (70.79%), Postives = 74/89 (83.15%), Query Frame = 1
Query: 1 MPRSKWKTPFIDKSLFKRLNFEYENQPTWSRRSTIYPALVGLELPIHNGKEMVTRKITPQMVGHKLGEFVTTRKSFY-KKLKRGGEKNK 264
M RS WKTPFIDKSL KRL E+E +PTWSRRSTIYPA VGL+L I+NGK+M++RKI P+MVGHKLGEFVTTRK+F KK+K+ K K
Sbjct: 1 MSRSNWKTPFIDKSLLKRLTPEHEKKPTWSRRSTIYPAAVGLKLQIYNGKDMISRKIKPEMVGHKLGEFVTTRKNFIAKKIKKTTTKKK 89
BLAST of mRNA_H-paniculata_contig18646.4613.1 vs. uniprot
Match: Q2TUF6_9PHAE (Ribosomal protein S19 n=2 Tax=Desmarestia TaxID=31339 RepID=Q2TUF6_9PHAE) HSP 1 Score: 126 bits (316), Expect = 4.050e-36 Identity = 60/82 (73.17%), Postives = 70/82 (85.37%), Query Frame = 1
Query: 1 MPRSKWKTPFIDKSLFKRLNFEYENQPTWSRRSTIYPALVGLELPIHNGKEMVTRKITPQMVGHKLGEFVTTRKSFYKKLKR 246
M RS WKTPFIDKSL KRLN E++ +PTWSRRSTIYPA+VGL+L IHNG++MV RKI P+MVGHKLGEFV TRK+F K K+
Sbjct: 1 MSRSNWKTPFIDKSLLKRLNPEHDKKPTWSRRSTIYPAVVGLKLRIHNGRDMVDRKIKPEMVGHKLGEFVPTRKTFVPKKKK 82
BLAST of mRNA_H-paniculata_contig18646.4613.1 vs. uniprot
Match: A0A3G5FPQ0_9PHAE (Ribosomal protein S19 n=1 Tax=Cladosiphon okamuranus TaxID=309737 RepID=A0A3G5FPQ0_9PHAE) HSP 1 Score: 125 bits (314), Expect = 7.490e-36 Identity = 61/82 (74.39%), Postives = 69/82 (84.15%), Query Frame = 1
Query: 1 MPRSKWKTPFIDKSLFKRLNFEYENQPTWSRRSTIYPALVGLELPIHNGKEMVTRKITPQMVGHKLGEFVTTRKSFYKKLKR 246
M RS WKTPFIDKSL KRL+ +YE +PTWSRRSTIYPA VGL+L I+NGKEMV RKI P+MVGHKLGEFV TRK+F K K+
Sbjct: 1 MSRSNWKTPFIDKSLLKRLDPKYEKKPTWSRRSTIYPAAVGLKLQIYNGKEMVYRKIKPEMVGHKLGEFVATRKTFIPKKKK 82
BLAST of mRNA_H-paniculata_contig18646.4613.1 vs. uniprot
Match: A0A4D6E522_9PHAE (Ribosomal protein S19 n=4 Tax=Laminariaceae TaxID=33636 RepID=A0A4D6E522_9PHAE) HSP 1 Score: 124 bits (311), Expect = 2.270e-35 Identity = 59/82 (71.95%), Postives = 69/82 (84.15%), Query Frame = 1
Query: 1 MPRSKWKTPFIDKSLFKRLNFEYENQPTWSRRSTIYPALVGLELPIHNGKEMVTRKITPQMVGHKLGEFVTTRKSFYKKLKR 246
M RS WKTPFIDKSL KRL ++E +P WSRRSTIYPA VGL+L I+NGK+M+TRKI P+MVGHKLGEFVTTRK+F K K+
Sbjct: 1 MSRSNWKTPFIDKSLLKRLTPQHEKKPIWSRRSTIYPAAVGLKLQIYNGKDMITRKIKPEMVGHKLGEFVTTRKNFIAKKKK 82
BLAST of mRNA_H-paniculata_contig18646.4613.1 vs. uniprot
Match: A0A8F0FDL3_9PHAE (Ribosomal protein S19 n=1 Tax=Analipus japonicus TaxID=31333 RepID=A0A8F0FDL3_9PHAE) HSP 1 Score: 124 bits (310), Expect = 3.430e-35 Identity = 60/88 (68.18%), Postives = 70/88 (79.55%), Query Frame = 1
Query: 1 MPRSKWKTPFIDKSLFKRLNFEYENQPTWSRRSTIYPALVGLELPIHNGKEMVTRKITPQMVGHKLGEFVTTRKSFYKKLKRGGEKNK 264
M RS WKTPF+DKS KRL ++E +PTWSRRSTIYPA VGL+L IHNGKEM++RKI P+MVGHKLGEFV TRK+F K K+ K K
Sbjct: 1 MARSNWKTPFVDKSFLKRLTPQHERKPTWSRRSTIYPAAVGLKLLIHNGKEMISRKIKPEMVGHKLGEFVPTRKTFIPKKKKTMVKKK 88
BLAST of mRNA_H-paniculata_contig18646.4613.1 vs. uniprot
Match: E6ZER8_ECTSI (Ribosomal protein S19 n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=E6ZER8_ECTSI) HSP 1 Score: 123 bits (308), Expect = 6.520e-35 Identity = 59/81 (72.84%), Postives = 65/81 (80.25%), Query Frame = 1
Query: 1 MPRSKWKTPFIDKSLFKRLNFEYENQPTWSRRSTIYPALVGLELPIHNGKEMVTRKITPQMVGHKLGEFVTTRKSFYKKLK 243
M RS WKTPFIDKSL KRL E E +PTWSRRSTIYPA VGL++ IHNGK+M+ RKI P+MVGHKLGEFV TRK F K K
Sbjct: 1 MSRSSWKTPFIDKSLLKRLTRELEKKPTWSRRSTIYPAAVGLKIHIHNGKDMIARKIKPEMVGHKLGEFVATRKPFIPKKK 81
BLAST of mRNA_H-paniculata_contig18646.4613.1 vs. uniprot
Match: A0A8F0FCH2_9PHAE (Ribosomal protein S19 n=1 Tax=Chorda asiatica TaxID=1281577 RepID=A0A8F0FCH2_9PHAE) HSP 1 Score: 122 bits (306), Expect = 1.440e-34 Identity = 59/82 (71.95%), Postives = 69/82 (84.15%), Query Frame = 1
Query: 1 MPRSKWKTPFIDKSLFKRLNFEYENQPTWSRRSTIYPALVGLELPIHNGKEMVTRKITPQMVGHKLGEFVTTRKSFYKKLKR 246
M RS WKTPFIDKSL KRL+ +E +PTWSRRSTIYPA VGL+L I+NGKEM++RKI P+MVGHKLGEFV TRK+F K K+
Sbjct: 1 MSRSSWKTPFIDKSLLKRLHPMHEKKPTWSRRSTIYPAAVGLKLHIYNGKEMISRKIKPEMVGHKLGEFVMTRKTFIPKKKK 82 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig18646.4613.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig18646.4613.1 >prot_H-paniculata_contig18646.4613.1 ID=prot_H-paniculata_contig18646.4613.1|Name=mRNA_H-paniculata_contig18646.4613.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=89bp MPRSKWKTPFIDKSLFKRLNFEYENQPTWSRRSTIYPALVGLELPIHNGKback to top mRNA from alignment at H-paniculata_contig18646:955..1221- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig18646.4613.1 ID=mRNA_H-paniculata_contig18646.4613.1|Name=mRNA_H-paniculata_contig18646.4613.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=267bp|location=Sequence derived from alignment at H-paniculata_contig18646:955..1221- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig18646:955..1221- >mRNA_H-paniculata_contig18646.4613.1 ID=mRNA_H-paniculata_contig18646.4613.1|Name=mRNA_H-paniculata_contig18646.4613.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=534bp|location=Sequence derived from alignment at H-paniculata_contig18646:955..1221- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |