mRNA_H-paniculata_contig1862.4606.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig1862.4606.1 vs. uniprot
Match: D7FXY4_ECTSI (Repressor of RNA polymerase III transcription n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXY4_ECTSI) HSP 1 Score: 364 bits (935), Expect = 7.830e-120 Identity = 210/289 (72.66%), Postives = 222/289 (76.82%), Query Frame = 1
Query: 511 MKYLDDPRLAYWSNFLESVELGDRLLSVRADAFSCKKAGDDKRFSKELERHMKEKMATSP--------------------------------------ASYGTSPSFGELADVGVRRTLVDLICTMNASFPDYDFSGMRPDHFQKEASVSFVRNKVNAGLAEVSVIHNKIFLESFWADLDEVMKLKDCEVYSYSPDTEGDPFTEGCLWSFNHFFLNKSLKRILFLHCTTKSKLHMMEDGMRNSDGXXXXXXXXXXXXXXXXXXXXGEKYPGEIMSDMDMEPAGGDDDSM 1263
MKYLD+PRLAYWSNFL SVELGDRLLSVR DAFSCKKAGDDKR SKELER + + T A++GTSPSFG L DVGVRRTLVDLICTMNASFPDYDFSG+RPD F KEASVS VRNKVNA LAEVSVIHNKIFLESFWADLDEVM LKDCEVYSYSPD EGDPFTEGCLWSFNHFFLNK+LKR+LFLHCTTKSKLH+MED + + XXXXXXXXXXXXXXXXXXXX PG IM DMDMEPAGGDDDS+
Sbjct: 1 MKYLDEPRLAYWSNFLRSVELGDRLLSVRTDAFSCKKAGDDKRLSKELERQLSASLPTPSRSSSAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGAAFGTSPSFGVLTDVGVRRTLVDLICTMNASFPDYDFSGVRPDSFDKEASVSLVRNKVNAALAEVSVIHNKIFLESFWADLDEVMTLKDCEVYSYSPDMEGDPFTEGCLWSFNHFFLNKNLKRVLFLHCTTKSKLHVMEDMLGSDSXXXXXXXXXXXXXXXXXXXXXXXTCPGYIMGDMDMEPAGGDDDSL 289
BLAST of mRNA_H-paniculata_contig1862.4606.1 vs. uniprot
Match: A0A7S2B0Q0_9STRA (Repressor of RNA polymerase III transcription n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B0Q0_9STRA) HSP 1 Score: 220 bits (560), Expect = 1.800e-64 Identity = 106/194 (54.64%), Postives = 142/194 (73.20%), Query Frame = 1
Query: 511 MKYLDDPRLAYWSNFLESVELGDRLLSVRADAFSCKKAGDDKRFSKELERHMKEKMATSPASYGTSPSFGELADVGVRRTLVDLICTMNASFPDYDFSGMRPDHFQKEASVSFVRNKVNAGLAEVSVIHNKIFLESFWADLDEVMKLKDCEVYSYSPDTEGDPFTEGCLWSFNHFFLNKSLKRILFLHCTTKSK 1092
MK+L+ P+L ++FL + E+GDR+L+ R +AFSCK+AG+DKR SK LE+ +++A SP + G+SP G L+D G RR L+DLI TMNASFPD+DFS +RP+ F KE VS V + +N LAE+S +N FLE W ++EV+KLK+CE+YSY PD E DPF+EG LW+FN FF NK+LKRIL+ C SK
Sbjct: 1 MKFLEQPQLEMLTSFLSNREIGDRILNGRIEAFSCKRAGEDKRLSKMLEQQYVDELACSPTALGSSP-LGPLSDSGTRRLLIDLISTMNASFPDHDFSSVRPEQFLKEQHVSLVMSNINMHLAELSETYNSSFLEELWMSIEEVVKLKECEIYSYVPDMEEDPFSEGNLWTFNFFFFNKNLKRILYFTCIATSK 193
BLAST of mRNA_H-paniculata_contig1862.4606.1 vs. uniprot
Match: A0A7R9U9D7_9STRA (Repressor of RNA polymerase III transcription n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9U9D7_9STRA) HSP 1 Score: 219 bits (559), Expect = 2.610e-64 Identity = 107/208 (51.44%), Postives = 144/208 (69.23%), Query Frame = 1
Query: 511 MKYLDDPRLAYWSNFLESVELGDRLLSVRADAFSCKKAGDDKRFSKELERHMKEKMATSPASYGTSPSFGELADVGVRRTLVDLICTMNASFPDYDFSGMRPDHFQKEASVSFVRNKVNAGLAEVSVIH--------NKIFLESFWADLDEVMKLKDCEVYSYSPDTEGDPFTEGCLWSFNHFFLNKSLKRILFLHCTTKSKLHMMED 1110
MKYL+DPRLA+++N L E+GD +L R +AFSCK+AGDDKR S++L+R +K+++ATSP S SP G L++ R L+DLI TMNASFPDYDFS +RP+ F KE+ +SFV N +N LA V K FL W ++++++L++CEVY Y PD +GDPF+EG LWSFN+FF NK+LKRI+F C +SKL D
Sbjct: 1 MKYLEDPRLAHYTNLLSDFEMGDIVLDGRVEAFSCKRAGDDKRLSRKLDRQLKQELATSPKSPAESP-LGPLSESSTRNLLIDLIITMNASFPDYDFSSLRPEQFLKESHLSFVVNDINTHLAHVDEFRIEGLTSGTEKKFLVDVWRTVEDIIRLRECEVYRYIPDLDGDPFSEGTLWSFNYFFFNKALKRIIFFTCIARSKLFSSVD 207
BLAST of mRNA_H-paniculata_contig1862.4606.1 vs. uniprot
Match: F0YN32_AURAN (Repressor of RNA polymerase III transcription n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YN32_AURAN) HSP 1 Score: 195 bits (495), Expect = 4.080e-55 Identity = 95/194 (48.97%), Postives = 131/194 (67.53%), Query Frame = 1
Query: 511 MKYLDDPRLAYWSNFLESVELGDRLLSVRADAFSCKKAGDDKRFSKELERHMKEKMATSPASYGTSPSFGELADVGVRRTLVDLICTMNASFPDYDFSGMRPDHFQKEASVSFVRNKVNAGLAEVSVIHNKIFLESFWADLDEVMKLKDCEVYSYSPDTEGDPFTEGCLWSFNHFFLNKSLKRILFLHCTTKSK 1092
MK L++ RL+ + FL LGDR++ R +AFSCK+AGDDK+ SK+LE+ +++ +SP S T+ G L+ RR L+DLI TMNASFPD+DFS +RP+ F +EAS FV L+E+S L+ WA ++E + LKDCEV+SY PD + DPF+EG LWSFN+FF NK+LKRI++ C +SK
Sbjct: 1 MKLLENNRLSALTAFLTERSLGDRVIDGRVEAFSCKRAGDDKKLSKQLEKQYADELTSSPGSLDTTSPLGVLSASSTRRLLIDLISTMNASFPDHDFSALRPEQFCREASADFVARSCTRYLSEISD-QGFDLLQELWAAVEEAVSLKDCEVFSYVPDLDSDPFSEGALWSFNYFFFNKTLKRIVYFSCVARSK 193
BLAST of mRNA_H-paniculata_contig1862.4606.1 vs. uniprot
Match: A0A836CAL9_9STRA (Repressor of RNA polymerase III transcription n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CAL9_9STRA) HSP 1 Score: 194 bits (494), Expect = 7.780e-55 Identity = 97/195 (49.74%), Postives = 135/195 (69.23%), Query Frame = 1
Query: 511 MKYLDDPRLAYWSNFLESVELGDRLLSVRADAFSCKKAGDDKRFSKELERHMKEKMATSPASYGTSPSFGELADVGVRRTLVDLICTMNASFPDYDFSGMRPDHFQKEASVSFVRNKVNAGLAEVSVIHNKIFLESFWADLDEVMKLKDCEVYSYSPDTE-GDPFTEGCLWSFNHFFLNKSLKRILFLHCTTKSK 1092
MK+++DP+LA SN++ ELGD++L+ R ++F+CK AG+DK+FSK+LE M +K SPAS +P+FG L + RR L+DLI TMN FPDYDFS DHF K+ + V N VNA L +++ +++ FLE W +DE +KLK C VYSY PD + GDPFT+G LWSFN+FF N K++L+L C ++K
Sbjct: 1 MKFIEDPKLAELSNWITGKELGDKVLTCRIESFTCKMAGEDKKFSKKLEEEM-DKAGVSPAS---APNFGPLNNTSARRILIDLIITMNMHFPDYDFSKAGADHFLKQPDATKVVNAVNAQLVDLTRLYHVNFLEQLWGAVDESIKLKQCSVYSYVPDADLGDPFTDGSLWSFNYFFYNPLRKKMLYLTCIARNK 191
BLAST of mRNA_H-paniculata_contig1862.4606.1 vs. uniprot
Match: A0A8J2SMK1_9STRA (Repressor of RNA polymerase III transcription n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SMK1_9STRA) HSP 1 Score: 190 bits (482), Expect = 4.000e-53 Identity = 95/200 (47.50%), Postives = 128/200 (64.00%), Query Frame = 1
Query: 511 MKYLDDPRLAYWSNFLESVELGDRLLSVRADAFSCKKAGDDKRFSKELERHMKEKMATSPASYGTSPSFGELADVGVRRTLVDLICTMNASFPDYDFSGMRPDHFQKEASVSFVRNKVNAGLAEVSVIHN------KIFLESFWADLDEVMKLKDCEVYSYSPDTEGDPFTEGCLWSFNHFFLNKSLKRILFLHCTTKSK 1092
MK L++PRL+ + FL LG+R+L R +AFSCK+AG+DK+ +KELE + SP+S S G LA RR LVDLI T+NASFPD+DFS +RP+ F +EA F LAE++ FL+ WA ++E ++L++CEVYSY PD E DPF+EG LWSFN+FF NK LKRI++L C +S+
Sbjct: 1 MKLLENPRLSALTAFLSQRRLGERVLDGRVEAFSCKRAGEDKKLAKELEAQFAAESRNSPSSMEASSPLGALAQPATRRLLVDLIATLNASFPDHDFSNLRPEQFCREAGAQFAVRACARHLAELATAERFRAPGGGEFLDELWAAIEEAIQLRECEVYSYVPDGESDPFSEGALWSFNYFFFNKRLKRIVYLSCVARSR 200
BLAST of mRNA_H-paniculata_contig1862.4606.1 vs. uniprot
Match: A0A6G0XTH3_9STRA (Repressor of RNA polymerase III transcription n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XTH3_9STRA) HSP 1 Score: 189 bits (479), Expect = 1.730e-52 Identity = 92/209 (44.02%), Postives = 134/209 (64.11%), Query Frame = 1
Query: 493 LAFVETMKYLDDPRLAYWSNFLESVELGDRLLSVRADAFSCKKAGDDKRFSKELERHMKEKMATSPASYGTSPSFGELADVGVRRTLVDLICTMNASFPDYDFSGMRPDHFQKEASVSFVRNKVNAGLAEVSVIHNKIFLESFWADLDEVMKLKDCEVYSYSPDTEG--DPFTEGCLWSFNHFFLNKSLKRILFLHCTTKSKLHMMEDG 1113
LA + MKYL++ L++ + L +GDR+++ R + FSCKKAG DK+ +K LE ++ P + ++ S G LAD R+ L++LI TMNASFPDYDFS ++P+ F KE + + N +N LAE+ + N FLE W + E ++ +CEVYSY PD +G DPF++G LWSFN+FF NK +K+IL+ C ++S H M DG
Sbjct: 3 LASFKKMKYLEEKTLSWANAALNEFCVGDRVINGRLECFSCKKAGQDKKLAKSLELIYQQSNNYPPTTEQSNVSIGTLADSNTRKLLINLISTMNASFPDYDFSDLKPERFHKEPDMRMIVNAINTQLAEIVEMDNMGFLEKLWESIVEAIQPSECEVYSYIPDMDGCSDPFSDGTLWSFNYFFYNKEMKKILYFTCMSRSAFHDMRDG 211
BLAST of mRNA_H-paniculata_contig1862.4606.1 vs. uniprot
Match: H3GX22_PHYRM (Repressor of RNA polymerase III transcription n=25 Tax=Peronosporaceae TaxID=4777 RepID=H3GX22_PHYRM) HSP 1 Score: 183 bits (464), Expect = 1.520e-50 Identity = 89/192 (46.35%), Postives = 127/192 (66.15%), Query Frame = 1
Query: 511 MKYLDDPRLAYWSNFLESVELGDRLLSVRADAFSCKKAGDDKRFSKELERHMKEKMATSPASYGTSPSFGELADVGVRRTLVDLICTMNASFPDYDFSGMRPDHFQKEASVSFVRNKVNAGLAEVSVIHNKIFLESFWADLDEVMKLKDCEVYSYSPDTEGDPFTEGCLWSFNHFFLNKSLKRILFLHCTTK 1086
MKYL++P+L++ ++ L S E+GDR+L + + +SCKKAG DKR +K LE + +++M + G+SP G LA R+ L++LI TMNASFPDYDFS ++P+ F+KE +VN LAE+ F+E W + E +KL +CEVYSY PD + DPF++G LWSFN+FF NK K+IL+ C K
Sbjct: 1 MKYLEEPQLSWLNSVLGSYEVGDRVLRGKLETYSCKKAGSDKRLAKSLELYYQQEMEAAADLLGSSP-LGPLAAPATRKLLINLISTMNASFPDYDFSAVKPEQFRKEPDFRIALQRVNHDLAELLEAEGNGFVEKMWEGIAEAIKLDECEVYSYIPDMDADPFSDGNLWSFNYFFYNKVQKKILYFTCICK 191
BLAST of mRNA_H-paniculata_contig1862.4606.1 vs. uniprot
Match: A0A1V9Z321_9STRA (Repressor of RNA polymerase III transcription n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9Z321_9STRA) HSP 1 Score: 181 bits (459), Expect = 6.360e-50 Identity = 94/200 (47.00%), Postives = 129/200 (64.50%), Query Frame = 1
Query: 511 MKYLDDPRLAYWSNFLESVELGDRLLSVRADAFSCKKAGDDKRFSKELERHMKEKMATSPASYGTSP-----SFGELADVGVRRTLVDLICTMNASFPDYDFSGMRPDHFQKEASVSFVRNKVNAGLAEVSVIHNKIFLESFWADLDEVMKLKDCEVYSYSPDTEG--DPFTEGCLWSFNHFFLNKSLKRILFLHCTTKS 1089
MKYLD+P L + + + V +GDR+++ R +AFSCKKAG DK+ +K LE A+Y +P S G LAD R+ L++LI TMNASFPDYDFS ++P+ F KE + V N VNA LAE+ + + FLE W + + KDCE+YSY PD +G DPF++G LWSFN+FF NK+LK+IL+ C ++S
Sbjct: 1 MKYLDEPTLDWANAAMSEVSVGDRVINGRLEAFSCKKAGADKKLAKSLE-----------AAYQQTPDVGANSIGSLADSNTRKLLINLISTMNASFPDYDFSDLKPEQFHKEVDLRLVVNGVNAQLAEIVEMDDMGFLEKLWESVFAAIAPKDCEIYSYIPDMDGCSDPFSDGTLWSFNYFFYNKALKKILYFTCMSRS 189
BLAST of mRNA_H-paniculata_contig1862.4606.1 vs. uniprot
Match: A0A0N7L3A5_PLAHL (Repressor of RNA polymerase III transcription n=2 Tax=Peronosporaceae TaxID=4777 RepID=A0A0N7L3A5_PLAHL) HSP 1 Score: 180 bits (457), Expect = 1.580e-49 Identity = 86/192 (44.79%), Postives = 126/192 (65.62%), Query Frame = 1
Query: 511 MKYLDDPRLAYWSNFLESVELGDRLLSVRADAFSCKKAGDDKRFSKELERHMKEKMATSPASYGTSPSFGELADVGVRRTLVDLICTMNASFPDYDFSGMRPDHFQKEASVSFVRNKVNAGLAEVSVIHNKIFLESFWADLDEVMKLKDCEVYSYSPDTEGDPFTEGCLWSFNHFFLNKSLKRILFLHCTTK 1086
MKYL++P+L++ ++ L S E+GDR+L+ + + +SCKKAG DKR +K LE + ++++ S G+SP G +A R+ L++LI TMNASFPDYDFS RP F+KE+ ++N LAE+ F E W + E +KL +C+VYSY PD + DPF++G LWSFN+FF NK K++L+ C K
Sbjct: 1 MKYLEEPQLSWLNSVLGSYEIGDRVLNGKLETYSCKKAGSDKRLAKSLELYYQQEIEASAEFLGSSP-LGPIAAPATRKLLINLISTMNASFPDYDFSAARPGQFRKESDFRIALQRINHDLAELLDAEGNGFAEKMWEAIAEAIKLDECDVYSYIPDMDSDPFSDGNLWSFNYFFYNKMQKKVLYFTCLCK 191 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1862.4606.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1862.4606.1 >prot_H-paniculata_contig1862.4606.1 ID=prot_H-paniculata_contig1862.4606.1|Name=mRNA_H-paniculata_contig1862.4606.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=253bp MKYLDDPRLAYWSNFLESVELGDRLLSVRADAFSCKKAGDDKRFSKELERback to top mRNA from alignment at H-paniculata_contig1862:8704..16216+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1862.4606.1 ID=mRNA_H-paniculata_contig1862.4606.1|Name=mRNA_H-paniculata_contig1862.4606.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7513bp|location=Sequence derived from alignment at H-paniculata_contig1862:8704..16216+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1862:8704..16216+ >mRNA_H-paniculata_contig1862.4606.1 ID=mRNA_H-paniculata_contig1862.4606.1|Name=mRNA_H-paniculata_contig1862.4606.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1518bp|location=Sequence derived from alignment at H-paniculata_contig1862:8704..16216+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |