prot_H-paniculata_contig1862.4604.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1862.4604.1
Unique Nameprot_H-paniculata_contig1862.4604.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length220
Homology
BLAST of mRNA_H-paniculata_contig1862.4604.1 vs. uniprot
Match: D7FXY3_ECTSI (Hydroxymethylglutaryl-CoA synthase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXY3_ECTSI)

HSP 1 Score: 322 bits (824), Expect = 8.590e-102
Identity = 171/237 (72.15%), Postives = 188/237 (79.32%), Query Frame = 0
Query:    1 AKGPARPTGGCGAVAVLVGPNAPLVVNQKTRASYACDVWDFFKPDMSSEYPQVNGQLSQMCYLRALDSCYDKLSKKKLKXXXXXXXR------------------PFVLEDVQHVLCHSPYNKLVQKSFARLAFSDARRLRKAGSPLCHTLPSPCACVTEIIPQETYDDRELEKALKSFAGVGSEPYRRMVEPGCRLSKQIGNTYTASVFANIVCLVDAHGSSLEGETALVFSYGSG 219
            A+GPARPTGGCGAVAVLVGP+APLV+N KTRASYACDVWDFFKPDMSSEYP+VNGQLSQ CYLRALDSCY++L+ KK  XXXXXXX                   PFVL DV+HVLCHSPYNKLVQKSFAR+AFSDARRL+  G PL            ++  +ETYDDR+LEKALK+FAGV S  YR  VEPGCRLSKQIGNTYTASVFANIVCLV A G++LEGETALVFSYGSG
Sbjct:  166 AEGPARPTGGCGAVAVLVGPDAPLVINMKTRASYACDVWDFFKPDMSSEYPRVNGQLSQTCYLRALDSCYNRLAAKKTAXXXXXXXXXXXXXXXXXXEGGGDKRAPFVLGDVEHVLCHSPYNKLVQKSFARMAFSDARRLKGTGKPLGEGQEEALGKWLDVPAEETYDDRDLEKALKAFAGVSSGAYRNKVEPGCRLSKQIGNTYTASVFANIVCLVCARGAALEGETALVFSYGSG 402          
BLAST of mRNA_H-paniculata_contig1862.4604.1 vs. uniprot
Match: A0A836C9U2_9STRA (Hydroxymethylglutaryl-coenzyme A synthase N terminal-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C9U2_9STRA)

HSP 1 Score: 247 bits (630), Expect = 2.420e-72
Identity = 128/221 (57.92%), Postives = 155/221 (70.14%), Query Frame = 0
Query:    1 AKGPARPTGGCGAVAVLVGPNAPLVVNQKTRASYACDVWDFFKPDMSSEYPQVNGQLSQMCYLRALDSCYDKLSKKKLKXXXXXXXR--PFVLEDVQHVLCHSPYNKLVQKSFARLAFSDARRLRKAGSPLCHTLPSPCACVTEIIPQETYDDRELEKALKSFAGVGSEPYRRMVEPGCRLSKQIGNTYTASVFANIVCLVDAHGSSLEGETALVFSYGSG 219
            A+GPARPTGGCGAVAVL+GP+APL VN   R ++ACDVWDFFKPDMSSEYP+V+G LSQ CYLRA+D CY + + KK +          P+  E   H L HSPYNKLVQKS+ARL F+DARR   AG PL   L +P     +   ++TY+D +L  ALK   GV +  Y+  V PGC LS++IGNTYTASVFANI CLVD  G++L+G    VFSYGSG
Sbjct:  168 AEGPARPTGGCGAVAVLIGPDAPLAVNACARTTHACDVWDFFKPDMSSEYPRVDGALSQSCYLRAIDDCYSRFADKKERSTDAAAATAAPYTAESADHFLFHSPYNKLVQKSYARLFFTDARRCSAAGRPLPPHL-APLEPWLDAPLEDTYNDVKLAAALK---GVAAAAYKARVAPGCVLSQRIGNTYTASVFANIACLVDREGAALDGARVAVFSYGSG 384          
BLAST of mRNA_H-paniculata_contig1862.4604.1 vs. uniprot
Match: M4BVN1_HYAAE (Hydroxymethylglutaryl-CoA synthase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BVN1_HYAAE)

HSP 1 Score: 197 bits (502), Expect = 2.840e-56
Identity = 107/220 (48.64%), Postives = 139/220 (63.18%), Query Frame = 0
Query:    1 AKGPARPTGGCGAVAVLVGPNAPLVVNQKTRASYACDVWDFFKPDMSSEYPQVNGQLSQMCYLRALDSCYDKLSKKKLKXXXXXXXRPFVLEDVQHVLCHSPYNKLVQKSFARLAFSDARRLRKAGSPLCHTLPSPCACVTEIIPQETYDDRELEKALKSFAGVGSEPYRRMVEPGCRLSKQIGNTYTASVFANIVCLVDAHGSSL-EGETALVFSYGSG 219
            AKGPARP+GGCGAVA+LVGP+AP+V++ KT+A++A +VWDF+KP MSSEYP V+GQLS  CYL ALD CY  L  KK K           +  V + + HSPY+KLVQKSFARL F D+RRL  +G        +      +    ET +DREL+   +    V  E +R  V P C  S+Q+GN+YTA+V+ N+  LV      L +G   L+FSYGSG
Sbjct:  155 AKGPARPSGGCGAVAMLVGPDAPMVLDCKTKATHAANVWDFYKPHMSSEYPTVDGQLSNACYLHALDECY-LLFCKKSKSLAAVDQEEIGVASVDYAVFHSPYHKLVQKSFARLGFLDSRRLMSSGDEAAKEKYASLRKWADAPLHETLNDRELDLVARD---VAREDFRVKVSPSCTTSQQLGNSYTAAVYMNLATLVYVRAKELAQGARVLLFSYGSG 370          
BLAST of mRNA_H-paniculata_contig1862.4604.1 vs. uniprot
Match: D0NKN5_PHYIT (Hydroxymethylglutaryl-CoA synthase n=14 Tax=Phytophthora TaxID=4783 RepID=D0NKN5_PHYIT)

HSP 1 Score: 199 bits (506), Expect = 1.030e-55
Identity = 106/220 (48.18%), Postives = 139/220 (63.18%), Query Frame = 0
Query:    1 AKGPARPTGGCGAVAVLVGPNAPLVVNQKTRASYACDVWDFFKPDMSSEYPQVNGQLSQMCYLRALDSCYDKLSKKKLKXXXXXXXRPFVLEDVQHVLCHSPYNKLVQKSFARLAFSDARRLRKAGSPLCHTLPSPCACVTEIIPQETYDDRELEKALKSFAGVGSEPYRRMVEPGCRLSKQIGNTYTASVFANIVCLVDAHGSSLE-GETALVFSYGSG 219
            AKGPARP+GGCGAVA+L+GP+AP+V++ +T++++A +VWDF+KP++SSEYP V+G+LS  CYL ALD CY    KK           P V   V + + HSPYNKLVQKSFARL F D+RRL            +P A        ET +DREL+ A +   GV  E ++  V P C  S+Q+GN YTA+V+ N+  LV A    L  G   L+FSYGSG
Sbjct:  155 AKGPARPSGGCGAVAMLIGPDAPMVLDCRTKSTHATNVWDFYKPNVSSEYPTVDGKLSNSCYLHALDECYQLFCKKSEAAVKVDGDEPGVAS-VDYAVFHSPYNKLVQKSFARLLFLDSRRLLHTEDEAAKEKFAPLAKWVHTPLDETLNDRELDLAAR---GVAKEDFQTKVSPSCTTSQQLGNCYTAAVYMNLATLVHARAKDLALGSRVLMFSYGSG 370          
BLAST of mRNA_H-paniculata_contig1862.4604.1 vs. uniprot
Match: A0A482SR24_9ARCH (Hydroxymethylglutaryl-CoA synthase (Fragment) n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SR24_9ARCH)

HSP 1 Score: 193 bits (490), Expect = 3.000e-55
Identity = 101/219 (46.12%), Postives = 134/219 (61.19%), Query Frame = 0
Query:    1 AKGPARPTGGCGAVAVLVGPNAPLVVNQKTRASYACDVWDFFKPDMSSEYPQVNGQLSQMCYLRALDSCYDKLSKKKLKXXXXXXXRPFVLEDVQHVLCHSPYNKLVQKSFARLAFSDARRLRKAGSPLCHTLPSPCACVTEIIPQETYDDRELEKALKSFAGVGSEPYRRMVEPGCRLSKQIGNTYTASVFANIVCLVDAHGSSLEGETALVFSYGSG 219
            A GPARPTGGCG+VA+L+G NAP+ ++ +TR   A  VWDFFKP++ SEYP VNG LSQ CYL++LD CY +  +K  +                ++L HSPYNKLVQKSF RL + D    +   SP+   L  P           TY+D++LE ALK  +  G   Y+  V  GC +S++IGNTYTASV+ N+  LV   G+ L G+  ++FSYGSG
Sbjct:  183 ADGPARPTGGCGSVAMLIGRNAPISIDLRTRTCSASHVWDFFKPNLHSEYPTVNGALSQTCYLQSLDDCYTRFLEKSQRIRQTD----MTASSADYILFHSPYNKLVQKSFGRLLYHDMLSKKVDASPITPWLNKPI--------HTTYEDKDLETALKEVSKAG---YKSKVSLGCEISQRIGNTYTASVYMNLAHLVSNLGNQLIGKKTMLFSYGSG 386          
BLAST of mRNA_H-paniculata_contig1862.4604.1 vs. uniprot
Match: A0A4D9DA31_9STRA (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9DA31_9STRA)

HSP 1 Score: 199 bits (506), Expect = 3.500e-55
Identity = 104/221 (47.06%), Postives = 149/221 (67.42%), Query Frame = 0
Query:    1 AKGPARPTGGCGAVAVLVGPNAPLVVNQKTRASYACDVWDFFKPDMSSEYPQVNGQLSQMCYLRALDSCYDKLSKKKLKXXXXXXXRPFVLEDVQHVLCHSPYNKLVQKSFARLAFSDARR--LRKAGSPLCHTLPSPCACVTEIIPQETYDDRELEKALKSFAGVGSEPYRRMVEPGCRLSKQIGNTYTASVFANIVCLVDAHGSSLEGETALVFSYGSG 219
            A GPA+PTGGCGAVA+LVGP+APLV++ + RA++A + WDFFKP  +SEYP+V+G++S+ CYL+ALD CY + + K+ +       +PF  + + +   H PYNKLVQK+F RL F DARR  L+KA         S    ++  + +ETYDDR+LE  L+   G+  + + + V P C +S Q+GNTYTASV+ N+VCL+     +L G+  LV+S+GSG
Sbjct:  279 ADGPAKPTGGCGAVALLVGPDAPLVIDPQLRATHASNTWDFFKPKFASEYPEVDGKMSKDCYLKALDDCYMRFAGKQEEAFG----KPFKADAIDYFCFHHPYNKLVQKAFGRLFFMDARRGKLKKAEG-----WESLDPWISNSL-EETYDDRDLETLLR---GLSHDRFSKRVAPSCLVSMQVGNTYTASVYMNLVCLIAQKAEALVGKRILVYSFGSG 486          
BLAST of mRNA_H-paniculata_contig1862.4604.1 vs. uniprot
Match: M4BVN2_HYAAE (Uncharacterized protein n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BVN2_HYAAE)

HSP 1 Score: 197 bits (502), Expect = 7.610e-55
Identity = 107/220 (48.64%), Postives = 139/220 (63.18%), Query Frame = 0
Query:    1 AKGPARPTGGCGAVAVLVGPNAPLVVNQKTRASYACDVWDFFKPDMSSEYPQVNGQLSQMCYLRALDSCYDKLSKKKLKXXXXXXXRPFVLEDVQHVLCHSPYNKLVQKSFARLAFSDARRLRKAGSPLCHTLPSPCACVTEIIPQETYDDRELEKALKSFAGVGSEPYRRMVEPGCRLSKQIGNTYTASVFANIVCLVDAHGSSL-EGETALVFSYGSG 219
            AKGPARP+GGCGAVA+LVGP+AP+V++ KT+A++A +VWDF+KP MSSEYP V+GQLS  CYL ALD CY  L  KK K           +  V + + HSPY+KLVQKSFARL F D+RRL  +G        +      +    ET +DREL+   +    V  E +R  V P C  S+Q+GN+YTA+V+ N+  LV      L +G   L+FSYGSG
Sbjct:  155 AKGPARPSGGCGAVAMLVGPDAPMVLDCKTKATHAANVWDFYKPHMSSEYPTVDGQLSNACYLHALDECY-LLFCKKSKSLAAVDQEEIGVASVDYAVFHSPYHKLVQKSFARLGFLDSRRLMSSGDEAAKEKYASLRKWADAPLHETLNDRELDLVARD---VAREDFRVKVSPSCTTSQQLGNSYTAAVYMNLATLVYVRAKELAQGARVLLFSYGSG 370          
BLAST of mRNA_H-paniculata_contig1862.4604.1 vs. uniprot
Match: A0A024TPQ8_9STRA (Hydroxymethylglutaryl-CoA synthase n=5 Tax=Aphanomyces TaxID=100860 RepID=A0A024TPQ8_9STRA)

HSP 1 Score: 196 bits (498), Expect = 3.420e-54
Identity = 106/219 (48.40%), Postives = 134/219 (61.19%), Query Frame = 0
Query:    1 AKGPARPTGGCGAVAVLVGPNAPLVVNQKTRASYACDVWDFFKPDMSSEYPQVNGQLSQMCYLRALDSCYDKLSKKKLKXXXXXXXRPFVLEDVQHVLCHSPYNKLVQKSFARLAFSDARRLRKAGSPLCHTLPSPCACVTEIIPQETYDDRELEKALKSFAGVGSEPYRRMVEPGCRLSKQIGNTYTASVFANIVCLVDAHGSSLEGETALVFSYGSG 219
            AKGPARPT GCGAVA+L+GPNAPLV+  + R +++ ++WDF+KPD  SEYP V+G+ SQ CYL+ LD CY +   K          + F +    +VL HSPYNKL QK FAR+ F+D   LR    P    L        E    ETY DRELE A +    V    + RMVEP C  S+ IGN YTASV+ N+ CLVD   S+L G+  ++FSYGSG
Sbjct:  240 AKGPARPTSGCGAVAMLIGPNAPLVMESELRTTFSENMWDFYKPDPHSEYPTVDGKFSQSCYLKTLDDCYRRFCSKNELAGVTKNGQFFDVAANDYVLFHSPYNKLAQKGFARIVFNDF--LRNPTLPQYEKLKKWHGAALE----ETYYDRELEAASRE---VSLNMWNRMVEPSCFASRHIGNCYTASVYINLACLVDTARSALHGKRLMLFSYGSG 449          
BLAST of mRNA_H-paniculata_contig1862.4604.1 vs. uniprot
Match: A0A7J7MZP9_9MAGN (Hydroxymethylglutaryl-CoA synthase n=1 Tax=Kingdonia uniflora TaxID=39325 RepID=A0A7J7MZP9_9MAGN)

HSP 1 Score: 189 bits (481), Expect = 3.490e-54
Identity = 105/219 (47.95%), Postives = 140/219 (63.93%), Query Frame = 0
Query:    1 AKGPARPTGGCGAVAVLVGPNAPLVVNQKTRASYACDVWDFFKPDMSSEYPQVNGQLSQMCYLRALDSCYDKLSKKKLKXXXXXXXRPFVLEDVQHVLCHSPYNKLVQKSFARLAFSDARRLRKAGSPLCHTLPSPCACVTEIIPQETYDDRELEKALKSFAGVGSEPYRRMVEPGCRLSKQIGNTYTASVFANIVCLVDAHGSSLEGETALVFSYGSG 219
            A+GPARPTGG  A+A+L+GP+AP+V   K RAS+   V+DF+KPD++SEYP V+G+LSQ CYL ALDSCY  L  K  K       +PF + D  +++ HSPYNKLVQKSFARL F D   LR A S +  +     A  + +   E+Y  R+LEK  +    V    Y   V+P   L KQ+GN YTAS++A +V L+    ++LEG+  L+FSYGSG
Sbjct:  181 AEGPARPTGGAAAIAMLIGPDAPIVFESKIRASHMSHVYDFYKPDLASEYPVVDGKLSQTCYLTALDSCYKLLCAKFEKLNG----KPFSISDADYIVFHSPYNKLVQKSFARLCFMDF--LRNASS-IDESAKEKLAPFSALTGDESYASRDLEKVSQQ---VAKPLYDLKVQPTTLLPKQVGNMYTASLYAALVSLIHNKTTTLEGKRVLMFSYGSG 389          
BLAST of mRNA_H-paniculata_contig1862.4604.1 vs. uniprot
Match: A0A251VID0_HELAN (Hydroxymethylglutaryl-CoA synthase n=14 Tax=Asteraceae TaxID=4210 RepID=A0A251VID0_HELAN)

HSP 1 Score: 188 bits (478), Expect = 4.270e-54
Identity = 102/219 (46.58%), Postives = 140/219 (63.93%), Query Frame = 0
Query:    1 AKGPARPTGGCGAVAVLVGPNAPLVVNQKTRASYACDVWDFFKPDMSSEYPQVNGQLSQMCYLRALDSCYDKLSKKKLKXXXXXXXRPFVLEDVQHVLCHSPYNKLVQKSFARLAFSDARRLRKAGSPLCHTLPSPCACVTEIIPQETYDDRELEKALKSFAGVGSEPYRRMVEPGCRLSKQIGNTYTASVFANIVCLVDAHGSSLEGETALVFSYGSG 219
            A+GPARPTGG  A+A+L+GP+AP+    K RAS+   V+DF+KPD++SEYP V+G+LSQ CYL ALDSCY+    K  K       + F + D  + + HSPYNKLVQKSFARL FSD   +R A S +  ++       T +   E+Y +R+LEKA +  A      Y + V+PG  ++KQ+GN YTAS++A    L+    SSL+G   ++FSYGSG
Sbjct:  153 AEGPARPTGGAAAIAMLIGPDAPIAFESKFRASHMSHVYDFYKPDLASEYPVVDGKLSQTCYLMALDSCYNGYCHKYEKLEG----KQFSIVDADYFVFHSPYNKLVQKSFARLVFSDV--VRNASS-VDESVKEKLGQFTPLTGDESYQNRDLEKASQQAA---KSYYDKKVQPGTLINKQVGNMYTASIYAAFASLIHNKYSSLDGNRVMMFSYGSG 361          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1862.4604.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FXY3_ECTSI8.590e-10272.15Hydroxymethylglutaryl-CoA synthase n=1 Tax=Ectocar... [more]
A0A836C9U2_9STRA2.420e-7257.92Hydroxymethylglutaryl-coenzyme A synthase N termin... [more]
M4BVN1_HYAAE2.840e-5648.64Hydroxymethylglutaryl-CoA synthase n=1 Tax=Hyalope... [more]
D0NKN5_PHYIT1.030e-5548.18Hydroxymethylglutaryl-CoA synthase n=14 Tax=Phytop... [more]
A0A482SR24_9ARCH3.000e-5546.12Hydroxymethylglutaryl-CoA synthase (Fragment) n=1 ... [more]
A0A4D9DA31_9STRA3.500e-5547.06Uncharacterized protein n=2 Tax=Monodopsidaceae Ta... [more]
M4BVN2_HYAAE7.610e-5548.64Uncharacterized protein n=1 Tax=Hyaloperonospora a... [more]
A0A024TPQ8_9STRA3.420e-5448.40Hydroxymethylglutaryl-CoA synthase n=5 Tax=Aphanom... [more]
A0A7J7MZP9_9MAGN3.490e-5447.95Hydroxymethylglutaryl-CoA synthase n=1 Tax=Kingdon... [more]
A0A251VID0_HELAN4.270e-5446.58Hydroxymethylglutaryl-CoA synthase n=14 Tax=Astera... [more]

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InterPro
Analysis Name: InterProScan on OGS1.0
Date Performed: 2022-09-29
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR013746Hydroxymethylglutaryl-coenzyme A synthase C-terminal domainPFAMPF08540HMG_CoA_synt_Ccoord: 25..219
e-value: 3.8E-51
score: 174.4
IPR016039Thiolase-likeGENE3D3.40.47.10coord: 1..219
e-value: 3.0E-68
score: 232.7
IPR016039Thiolase-likeSUPERFAMILY53901Thiolase-likecoord: 25..219
NoneNo IPR availablePANTHERPTHR43323:SF23-HYDROXY-3-METHYLGLUTARYL COENZYME A SYNTHASEcoord: 1..219
NoneNo IPR availablePANTHERPTHR43323FAMILY NOT NAMEDcoord: 1..219

Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1862contigH-paniculata_contig1862:263..1700 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1862.4604.1mRNA_H-paniculata_contig1862.4604.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1862 263..1700 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1862.4604.1 ID=prot_H-paniculata_contig1862.4604.1|Name=mRNA_H-paniculata_contig1862.4604.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=220bp
AKGPARPTGGCGAVAVLVGPNAPLVVNQKTRASYACDVWDFFKPDMSSEY
PQVNGQLSQMCYLRALDSCYDKLSKKKLKQQQQQQQRPFVLEDVQHVLCH
SPYNKLVQKSFARLAFSDARRLRKAGSPLCHTLPSPCACVTEIIPQETYD
DRELEKALKSFAGVGSEPYRRMVEPGCRLSKQIGNTYTASVFANIVCLVD
AHGSSLEGETALVFSYGSG*
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Annotated Terms
The following terms have been associated with this polypeptide:
Vocabulary: INTERPRO
TermDefinition
IPR013746HMG_CoA_synt_C_dom
IPR016039Thiolase-like