mRNA_H-paniculata_contig18596.4592.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig18596.4592.1
Unique NamemRNA_H-paniculata_contig18596.4592.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig18596.4592.1 vs. uniprot
Match: D7FV62_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV62_ECTSI)

HSP 1 Score: 348 bits (893), Expect = 9.890e-114
Identity = 186/214 (86.92%), Postives = 199/214 (92.99%), Query Frame = 1
Query:    1 YYLADGVKLFSQETWRMFMGEVGRDMVGKYAADVTDYYCMASELDNHCVRESACHSIAEMAEKVAPTYLAHHVDRLLKALLVCFFDESWPVRDAACVASGRFAEAYPEECRPSLDKLYERWFGHVGDPIXXXXXXXXXXXXXXXXXXXEEACEKVFAWVKENLPKAREQRSESVAEHKRRQNDAKAHTGNQVYSCGSLAPKLKKGGCSDCEVRR 642
            YYLADGVKLFSQETWRMFMGE GR+MVGKYA DVTDYYCMASELDNHCVRESACHSIAEMAEKVAP YLA HVDRLLKALLVCFFDESWPVRDAACVASGRFA AYPEECRPSL+KLYERWF HVGDPIXXXXXXXXXXXXXXXXXXX EA +KV AWV ENLP+A++Q +ES  +H+R+ NDAKAHTGNQV+SCGSLAPKL+KGGCSDC+V R
Sbjct:  305 YYLADGVKLFSQETWRMFMGEEGREMVGKYAQDVTDYYCMASELDNHCVRESACHSIAEMAEKVAPQYLATHVDRLLKALLVCFFDESWPVRDAACVASGRFAGAYPEECRPSLEKLYERWFRHVGDPIXXXXXXXXXXXXXXXXXXXXEAYDKVSAWVTENLPRAKQQGAESAEQHRRKHNDAKAHTGNQVFSCGSLAPKLRKGGCSDCQVTR 518          
BLAST of mRNA_H-paniculata_contig18596.4592.1 vs. uniprot
Match: A0A835YU79_9STRA (Armadillo-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU79_9STRA)

HSP 1 Score: 253 bits (647), Expect = 4.920e-77
Identity = 126/214 (58.88%), Postives = 148/214 (69.16%), Query Frame = 1
Query:    1 YYLADGVKLFSQETWRMFMGEVGRDMVGKYAADVTDYYCMASELDNHCVRESACHSIAEMAEKVAPTYLAHHVDRLLKALLVCFFDESWPVRDAACVASGRFAEAYPEECRPSLDKLYERWFGHVGDPIXXXXXXXXXXXXXXXXXXXEEACEKVFAWVKENLPKAREQRSESVAEHKRRQNDAKAHTGNQVYSCGSLAPKLKKGGCSDCEVRR 642
            YY+A+GVKL+SQETWR ++   GR MV K+A  V  YY   ++ +NH VRE+ACH IAEMA KV    +A HV  LL+ALL+CF DESWPVRDAACVASGRFA A+PEECR  L  L+ERWF H+ +PI                    EA ++  AWVKE LPKAREQ +++  E K  QNDAKAHT  Q YSCGSLAPKLKKGGCSDCEV R
Sbjct:  300 YYMAEGVKLYSQETWRRYLDGEGRTMVAKHAPAVVAYYVAMTDANNHVVREAACHCIAEMAAKVDHAAIAPHVPALLRALLICFKDESWPVRDAACVASGRFAAAFPEECREQLPLLFERWFKHLAEPIWSVREDSAAALGEVCAAYGREAIDRCLAWVKEMLPKAREQPAQTYEEMKAMQNDAKAHTDKQRYSCGSLAPKLKKGGCSDCEVTR 513          
BLAST of mRNA_H-paniculata_contig18596.4592.1 vs. uniprot
Match: A0A7S2V715_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V715_9STRA)

HSP 1 Score: 213 bits (543), Expect = 1.300e-64
Identity = 115/242 (47.52%), Postives = 142/242 (58.68%), Query Frame = 1
Query:    1 YYLADGVKLFSQETWRMFMGEVGRDMVGKYAADVTDYYCMASELDNHCVRESACHSIAEMAEKVAPTYLAHHVDRLLKALLVCFFDESWPVRDAACVASGRFAEAYPEECRP-------------------------SLDKLYERWFGHVGDPIXXXXXXXXXXXXXXXXXXXEEACEKVFAWVKENLPKAREQRSESVAEHKRRQNDAKAHTGNQVYSCGSLAPKLKKGG---CSDCEVRR 642
            YYLA+GVKL+SQ+TW++   + GR  V + A  V  YY   +E DNH VRE+ACH+IAE A K+     A  V  LL+ALLVCF+DESWPVRDAACVASG FA AYP++CR                           L++LYERWF HV DP+                   EE   +V A++K++L  AR Q + +  + K   ND  AHTGNQVYSCGSLAPKLK+GG   CSDC V R
Sbjct:    1 YYLAEGVKLYSQDTWKIVFKDQGRARVAEQAGQVARYYISTTEKDNHVVREAACHAIAEYAVKIDKDAAAPFVSDLLEALLVCFYDESWPVRDAACVASGTFAAAYPDQCRERRQPALEEEGGQQTGEVKAEAEVPTQLERLYERWFAHVSDPVWSVREDSAVALGQVCAAYGEEGLARVVAYLKDHLDDARSQPNLTPEQFKFSHNDHAAHTGNQVYSCGSLAPKLKRGGRKGCSDCTVTR 242          
BLAST of mRNA_H-paniculata_contig18596.4592.1 vs. uniprot
Match: A0A1E7FDE2_9STRA (ARM repeat-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FDE2_9STRA)

HSP 1 Score: 192 bits (489), Expect = 2.360e-53
Identity = 120/227 (52.86%), Postives = 153/227 (67.40%), Query Frame = 1
Query:    1 YYLADGVKLFSQETWRMFMGEVGRDMVGKYAADVTDYYCMASELDNHCVRESACHSIAEMAEKVA-----PTYLAHHVDRLLKALLVCFFDESWPVRDAACVASGRFAEAYPEECRPSLDKLYERWFGHVGDPIXXXXXXXXXXXXXXXXXXXEEACEKVFAWVKENLPKAREQRSESVAEHKRRQNDAKAHTGNQVYSCGSLAPKLKKG------GCSDCEVRRQR 648
            +YLA GVKL+S +TW++   E G   V K  A +  YY    + DNH VRE+AC ++AE+A K+         L  HV  LL+ALL+CF DESWPVRD AC+A G F  AYPEECRP L+ L+ RW   + D  XXXXXXXXXXXXXXXXXXX+E  +++ A++KENLP A+ Q  +++ E K  QN+ +AHT NQ+YSCGSLAPKLKK       GC +CEV R +
Sbjct:  353 FYLAQGVKLYSHQTWKLIFPENGVQAVAKSIASIVRYYVKMCDADNHVVREAACQAVAELAVKIGRDEQHAMVLQPHVTILLQALLMCFHDESWPVRDEACLACGIFCRAYPEECRPELETLWTRWTEQLTDXXXXXXXXXXXXXXXXXXXXXKEFFDRLMAFIKENLPAAKLQPKQTMEEFKALQNNMEAHTENQLYSCGSLAPKLKKKAGAGRIGCGNCEVNRPK 579          
BLAST of mRNA_H-paniculata_contig18596.4592.1 vs. uniprot
Match: B7GE47_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GE47_PHATC)

HSP 1 Score: 192 bits (487), Expect = 2.860e-53
Identity = 119/226 (52.65%), Postives = 154/226 (68.14%), Query Frame = 1
Query:    1 YYLADGVKLFSQETWRMFMGEVGRDMVGKYAADVTDYYCMASELDNHCVRESACHSIAEMAEKVA--PTY---LAHHVDRLLKALLVCFFDESWPVRDAACVASGRFAEAYPEECRPSLDKLYERWFGHVGDPIXXXXXXXXXXXXXXXXXXXEEACEKVFAWVKENLPKAREQRSESVAEHKRRQNDAKAHTGNQVYSCGSLAPKLKKGG-----CSDCEVRRQR 648
            +YLA GVKL+S ETW++   + G  +V      V  YY    + DNH VRE+AC ++AE+A ++   P +   L  H+D LL+ALL+CF DESWPVRD AC+A G   +AYPE CRP L KL+ERW G + D  XXXXXXXXXXXXXXXXXX  +  +++ A V + LP AR Q + +  E+K RQNDA AHT +Q+YSCGSLAPKL+KGG     CS C+V R++
Sbjct:  368 FYLAQGVKLYSHETWKLVFVDSGVSLVAANLPAVCRYYVQMCDADNHVVREAACQAVAELAIRLGSDPNHHDELLPHMDLLLQALLMCFHDESWPVRDEACLACGLLCKAYPESCRPELGKLWERWTGQLTDXXXXXXXXXXXXXXXXXXXXGADFLQELLALVDKLLPSARSQSAMTPTEYKARQNDAAAHTDSQLYSCGSLAPKLRKGGAGRIGCSSCDVNREK 593          
BLAST of mRNA_H-paniculata_contig18596.4592.1 vs. uniprot
Match: A0A061SKS1_9CHLO (Arm repeat-containing protein n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SKS1_9CHLO)

HSP 1 Score: 188 bits (477), Expect = 3.260e-52
Identity = 104/230 (45.22%), Postives = 134/230 (58.26%), Query Frame = 1
Query:    1 YYLADGVKLFSQETWRMFMGEVGRDMVGKYAADVTDYYCMASELDNHCVRESACHSIAEMAEKVAPTYLAHHVDRLLKALLVCFFDESWPVRDAACVASGRFAEAYPEECRPSLDKLYERWFGHVGDPIXXXXXXXXXXXXXXXXXXXEEACEKVFAWVKENLPKAREQRSES-------------VAEHKRRQNDAKAHTGNQVYSCGSLAPKLKKG-GCSDCEVRRQR 648
            YY+A+GV+L+SQETWR+ MG+ GR+   K+A +V  YY   S+ +NH VRE+AC  IAE+  KV    +  HV RLL ALL+ F D SWPVRDAACVA+GR   A+ EE  P LD LYE WF H+ D I                   +EA +K+   +K  LP A+EQ SES             VA  + R ND   HT   ++SCGSLAPKL++G GC D    R++
Sbjct:  310 YYVAEGVRLYSQETWRLVMGDGGREWTAKFANEVVSYYIAQSKANNHAVREAACACIAELMVKVDSDAVRPHVSRLLGALLLAFKDASWPVRDAACVATGRCVGAFKEETLPMLDDLYELWFAHLWDNIPSVREDSAVALGNVVRSYGQEAVDKIVEKMKVMLPHAKEQPSESHRYAGLDNTTTFGVAAKRARDNDEALHTNQTMFSCGSLAPKLQRGSGCMDHGFSREK 539          
BLAST of mRNA_H-paniculata_contig18596.4592.1 vs. uniprot
Match: A0A7S2UBJ5_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UBJ5_9STRA)

HSP 1 Score: 187 bits (474), Expect = 5.350e-52
Identity = 114/227 (50.22%), Postives = 150/227 (66.08%), Query Frame = 1
Query:    1 YYLADGVKLFSQETW-RMFMGEVGRDMVGKYAADVTDYYCMASELDNHCVRESACHSIAEMAEKVAPT-----YLAHHVDRLLKALLVCFFDESWPVRDAACVASGRFAEAYPEECRPSLDKLYERWFGHVGDPIXXXXXXXXXXXXXXXXXXXEEACEKVFAWVKENLPKAREQRSESVAEHKRRQNDAKAHTGNQVYSCGSLAPKLKKGG-----CSDCEVRRQR 648
            +YLA GVKL+S ETW ++F    G + + K+A  V  YY    + DNH VRE+AC ++AE+A+K+        YLA  V  LL+ALL+CF DESWPVRD AC+A G F +AYPEECRP L  L+ RW  H+    XXXXXXXXXXXXXXXXX      E++   ++  LP A++Q   +  E+K+ QND  +H+ +Q+YSCGSLAPKL+KGG     CSDC + R +
Sbjct:  249 FYLAQGVKLYSHETWFQLFQTRNGMEAIAKHAGPVCRYYIKMCDADNHVVREAACQAVAELAQKLGSNPEYAHYLAPFVPMLLQALLMCFHDESWPVRDEACLACGTFCKAYPEECRPELPTLFSRWTEHLTXXXXXXXXXXXXXXXXXXXXYGPPMVEQILDVLRTQLPSAKDQPPMTREEYKQNQNDIDSHSNSQLYSCGSLAPKLRKGGAGRIGCSDCAITRPK 475          
BLAST of mRNA_H-paniculata_contig18596.4592.1 vs. uniprot
Match: B8BVW3_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BVW3_THAPS)

HSP 1 Score: 187 bits (475), Expect = 2.940e-51
Identity = 124/246 (50.41%), Postives = 154/246 (62.60%), Query Frame = 1
Query:    1 YYLADGVKLFSQETWRMFMGEV--------------------GRDMVGKYAADVTDYYCMASELDNHCVRESACHSIAEMAEKVAP-----TYLAHHVDRLLKALLVCFFDESWPVRDAACVASGRFAEAYPEECRPSLDKLYERWFGHVGDPIXXXXXXXXXXXXXXXXXXXEEACEKVFAWVKENLPKAREQRSESVAEHKRRQNDAKAHTGNQVYSCGSLAPKLKKGG-----CSDCEVRRQR 648
            +YLA GVKL+SQ+TW++  G                      G   V + AA +  YY    + DNH VRE+ C  IAE+A+KV        YL+ +V  LL+ALL+CF DESWPVRD AC+A G F  AYPEEC P L+ L+ERW   +    XXXXXXXXXXXXXXXXXXX++  EKV   V++ LP A++Q + S  E+K+ QND  AHTGNQVYSCGSLAPKL+KGG     CS C V R +
Sbjct:  466 FYLAQGVKLYSQDTWKIIFGSSHNAAEGEEGLHSSGKSKGGGGMGAVARNAAPLCRYYSKMCDADNHAVREAGCQGIAELAQKVGKHPLYADYLSPYVTMLLQALLMCFHDESWPVRDEACLACGTFCIAYPEECTPELNTLFERWTEQLTXXXXXXXXXXXXXXXXXXXXXXQDMFEKVLGVVRKQLPAAKDQPAMSREEYKKLQNDVSAHTGNQVYSCGSLAPKLRKGGAGRIGCSSCLVDRPK 711          
BLAST of mRNA_H-paniculata_contig18596.4592.1 vs. uniprot
Match: A0A7S2EMR0_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EMR0_TRICV)

HSP 1 Score: 182 bits (462), Expect = 4.750e-51
Identity = 122/238 (51.26%), Postives = 151/238 (63.45%), Query Frame = 1
Query:    1 YYLADGVKLFSQETWRMFMGEVGR----DMVGKYAADVTDYYCMASELDNHCVRESACHSIAEMAEKVA--PTY---LAHHVDRLLKALLVCFFDESWPVRDAACVASGRFAEAYPEECRPSLDKLYERWFGHVGDPIXXXXXXXXXXXXXXXXXXXEEACEKVFAWVKENLPKAREQRSESVAEHKRRQNDAKAHTGNQVYSCGSLAPKLKKG-------------GCSDCEVRRQR 648
            +YLA GVKL+S +TWR+     G+    + V   A  V  YY    + DNH VRE+AC ++AE+A K+   P +   L++ V  LL+ALL CF DESWPVRD AC+A G F  AYPEECRP LD L+ RW   + D  XXXXXXXXXXXXXXXXXX  E  E+V   +++ +P AR Q   S  E+KRRQND +AH+  Q+YSCGSLAPKLKKG             GC +CEV R R
Sbjct:  172 FYLAQGVKLYSHDTWRIVFPPGGKRSGLEAVADCAGAVCRYYVKMCDADNHVVREAACQAVAELASKIGSHPLHSASLSNFVPLLLQALLTCFHDESWPVRDEACLACGTFCVAYPEECRPELDVLFGRWTEQLTDXXXXXXXXXXXXXXXXXXXXGAEMHERVLGVLRDAIPGARRQAPMSREEYKRRQNDIEAHSDGQLYSCGSLAPKLKKGSAIGRDAPGKGRIGCGNCEVDRPR 409          
BLAST of mRNA_H-paniculata_contig18596.4592.1 vs. uniprot
Match: UPI001C917B12 (uncharacterized protein LOC122388790 isoform X1 n=6 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=UPI001C917B12)

HSP 1 Score: 184 bits (467), Expect = 5.400e-51
Identity = 98/228 (42.98%), Postives = 137/228 (60.09%), Query Frame = 1
Query:    1 YYLADGVKLFSQETWRMFMGEVGRDMVGKYAADVTDYYCMASELDNHCVRESACHSIAEMAEKVAPTYLAHHVDRLLKALLVCFFDESWPVRDAACVASGRFAEAYPEECRPSLDKLYERWFGHVGDPIXXXXXXXXXXXXXXXXXXXEEACEKVFAWVKENLPKAREQRSES--------VAEHKR-RQNDAKAHTGNQVYSCGSLAPKLKKGGCSDCEVRRQRGVE 657
            YY+A+GVK+++Q TW    G+ GR++V +Y  DV +YY +A+  +NH VRE+AC+ I E+ +K++P  LA + +R+L ALLVCF D+SWPVRD AC+A GR   A+PE CRP LD+LY   F ++ D I                   E+A   V   V+E+L   +++   S         AE K+ R ND + HT   +YSCGSLAPK+  GGCS C  R +R VE
Sbjct:  293 YYVAEGVKIYNQRTWETIAGQRGRELVEQYINDVVEYYLVATTAENHAVREAACYCITELLKKLSPQTLAPYAERVLDALLVCFQDDSWPVRDTACLAVGRLLVAFPETCRPHLDRLYPLLFSNLHDNIPSVRQGGAEALANAVRAYGEQALTLVMNRVREDLTALKDEPEPSGPAAAPGGYAERKQQRDNDEQLHTNQTMYSCGSLAPKMAAGGCSACH-RFRRPVE 519          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig18596.4592.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FV62_ECTSI9.890e-11486.92Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YU79_9STRA4.920e-7758.88Armadillo-type protein n=1 Tax=Tribonema minus Tax... [more]
A0A7S2V715_9STRA1.300e-6447.52Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
A0A1E7FDE2_9STRA2.360e-5352.86ARM repeat-containing protein n=1 Tax=Fragilariops... [more]
B7GE47_PHATC2.860e-5352.65Predicted protein n=1 Tax=Phaeodactylum tricornutu... [more]
A0A061SKS1_9CHLO3.260e-5245.22Arm repeat-containing protein n=2 Tax=Tetraselmis ... [more]
A0A7S2UBJ5_9STRA5.350e-5250.22Hypothetical protein n=1 Tax=Attheya septentrional... [more]
B8BVW3_THAPS2.940e-5150.41Uncharacterized protein n=1 Tax=Thalassiosira pseu... [more]
A0A7S2EMR0_TRICV4.750e-5151.26Hypothetical protein (Fragment) n=1 Tax=Trieres ch... [more]
UPI001C917B125.400e-5142.98uncharacterized protein LOC122388790 isoform X1 n=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig18596contigH-paniculata_contig18596:627..4911 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score350.1
Seed ortholog evalue7.4e-94
Seed eggNOG ortholog2880.D7FV62
Hectar predicted targeting categoryother localisation
EggNOG OGs28JXF@1,2QSBS@2759
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons4
Model size660
Cds size660
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig18596.4592.1prot_H-paniculata_contig18596.4592.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig18596 627..4911 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929437.0016987-CDS-H-paniculata_contig18596:626..8251622929437.0016987-CDS-H-paniculata_contig18596:626..825Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18596 627..825 -
1691480860.7598476-CDS-H-paniculata_contig18596:626..8251691480860.7598476-CDS-H-paniculata_contig18596:626..825Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18596 627..825 -
1622929437.0219336-CDS-H-paniculata_contig18596:1458..15601622929437.0219336-CDS-H-paniculata_contig18596:1458..1560Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18596 1459..1560 -
1691480860.783059-CDS-H-paniculata_contig18596:1458..15601691480860.783059-CDS-H-paniculata_contig18596:1458..1560Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18596 1459..1560 -
1622929437.0428326-CDS-H-paniculata_contig18596:3080..32501622929437.0428326-CDS-H-paniculata_contig18596:3080..3250Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18596 3081..3250 -
1691480860.7963202-CDS-H-paniculata_contig18596:3080..32501691480860.7963202-CDS-H-paniculata_contig18596:3080..3250Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18596 3081..3250 -
1622929437.058645-CDS-H-paniculata_contig18596:4722..49111622929437.058645-CDS-H-paniculata_contig18596:4722..4911Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18596 4723..4911 -
1691480860.8037112-CDS-H-paniculata_contig18596:4722..49111691480860.8037112-CDS-H-paniculata_contig18596:4722..4911Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18596 4723..4911 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig18596.4592.1

>prot_H-paniculata_contig18596.4592.1 ID=prot_H-paniculata_contig18596.4592.1|Name=mRNA_H-paniculata_contig18596.4592.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=220bp
YYLADGVKLFSQETWRMFMGEVGRDMVGKYAADVTDYYCMASELDNHCVR
ESACHSIAEMAEKVAPTYLAHHVDRLLKALLVCFFDESWPVRDAACVASG
RFAEAYPEECRPSLDKLYERWFGHVGDPIWSVREDSATALGAVCRAYGEE
ACEKVFAWVKENLPKAREQRSESVAEHKRRQNDAKAHTGNQVYSCGSLAP
KLKKGGCSDCEVRRQRGVE*
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mRNA from alignment at H-paniculata_contig18596:627..4911-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig18596.4592.1 ID=mRNA_H-paniculata_contig18596.4592.1|Name=mRNA_H-paniculata_contig18596.4592.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4285bp|location=Sequence derived from alignment at H-paniculata_contig18596:627..4911- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TACTACCTTGCGGACGGCGTAAAGCTGTTTTCGCAGGAAACGTGGCGGAT GTTCATGGGGGAGGTCGGGCGGGACATGGTGGGCAAGTACGCGGCGGATG TGACGGACTATTACTGCATGGCGAGCGAGCTGGACAACCACTGTGTCCGC GAGTCGGCGTGCCACAGCATCGCTGAGATGGCGGAAAAGGTACGAAAATA ATCACTCCACGTTTTCTGCTCAGGCATTATTCCCCAATATTTGTGTCCAG TCGCTCATACCCGCGGTCAAAGGGCAAAGAAGAAATCGTATCATACGCTG TCGGGTTGTTTGGTGTCGAGTTCTCTGCAGATATGTCTATAGATGTAGAT ACTAACGTTTCATTGTTGAACACTATGAACGCTGCTCTTCAGGCAATCTC TCTAATTCGTCTAATAGTCACTCTTAAGAGAATAAAAGATGTAGGTCGAA ATAGATATCTCTATGACATGCATGATTACCGCACCGGGATTGGAAACCGC TGCTGTCAGAACACCCAGTCCACTGCAGACAAGAATATACGTCATAGGCA GGGAGTCAGCGTTTTTCCATCGAATTCATGTTCTGTATTTCTGAACAGTA TGCATGTACGTATGTACTAACTATCATGTGTGGGTATTAAGGATGCCGTC TTTTTTTTGGCGTTGCATTGAGCGGTGTATAGAGTATAAAAGTGTTGATA TATTGGCATCCAATTGCAGATTGTGAAGAAAACTCCCCGAAAATTTCTCA CGTCGTATCGAACACAGAAAAAAGAATCCGTTGTATTTCCGACTACGGTG ATAAAGATGGCTTGACTCTTGGATGCGTGATTTTTCAGAGCTCCTCCAAG TGTACGCGTGATTCTGATTGGCGCAACTTCCCATGGGCAAATAACACACT CCTTGAAAAGTCGTGTTTCCGGCAGAAGTAAATTTTTGGATCTATTGGTT AGGTATAAATTGGAAGCCGGACATGATCGAGCCGATTCGTTAGCGTGAAC GGAAATAGTCCGGGCTTATAGTTCCGCAGGAGCTACCAAAAGGTGGAGGG CGTGATTGGTTCTTCGGTGTGCGCCGGCCTCGGACCCTTCGAGTCGCACT CGTTAAATGAATCATATGCTCGTTTTGTGTCGTTGAACTCGAAAACTAAA AGCGAATGACGTGAGTCACTTAACATTTGAAAATCACCTTTACTTTTGGT GAAGACATGGTCTCATTGGGAAGTTGGTGTAGGTCATTGATTGATGGGGG AATGGTCGATTTTGCGGGGTGCTGAGTGGGTGCCGCTGTTGTAAACGCAG AAACACCATTTCGTGGTTGCCGGTTCGAAGCTGCCGGCCTCTGCTTTGCC TTCCTCAAGGCTGCGTTAGCGATTTATCAAAATATGTATCAGCGTAGAAG CTGTTGTCCCGTTTTTGTTGTTGTTGTCGGGCAATGCGAGTTGGCGTCGT TTTTCAGTGTTTCGTGTTTAGTTCACGAAGGAATTCTACAAAATTGAAGG ATTGTAGTTGATATACAGAGTGCAGGAACATACCCCTGACCCCATTTGTT TCACCTGCAAATATTCATGTAGCAAATAATAGCGACGGATCTACATAACA CATAAGCTGATGTATTGTGTTATGTATATGTGTGTGTCCTTGTTTCATTA TGTTATTTCAGGTTGCTCCCACGTACCTGGCCCATCATGTGGATCGGCTG CTCAAGGCCCTCTTGGTGTGTTTCTTCGATGAGAGCTGGCCAGTCAGGGA CGCCGCATGCGTGGCCAGTGGACGCTTTGCAGAAGCCTACCCTGAGGAGT GCCGTCCCAGCTTGGACAAACTCTATGAAAGGTCCGTTGGACTTGAGGGG TTGAATAACTTGTATATGCTATCATATGCAATCAGGACACGTTTTTGTTG TTGGTTGTGGTGTGTGGAATAGAGAGAGTTATTTGTTCTCTTTGCCCGAG CAAGAAAAAGGGATTTAGTTGAACGTACTATGCGATATACCCTCCTCCCC CCCTGTTTTTTGTTTTTCGGTACACAGTAAAGCGAGGAAATCTCTCTCTC TCTCTCTCTCTCTATATATATATATATATATATATATATATTCCTTTTTG TCAGGATGTCTTGTTTTCGAGGGATATATAGCCCTTGCTCGAAACAAAAA ACGACCGGAAAAAATTAAAAGTGCACCTCGTTGACCGAGCCCCAAAATAA ATGGTATGGGAAGATAAATGGTAGGTATGTTCCACTGTAAGGTGTTGAGG TACGCCGATTGTTGTTGACTGTTGCTGGTGGGTTTTGGTCTAGCCTTTGC TTATGATACATGCTTTCCTTACCCTTGTTCATCTCATCTCCTTTGATCTC CTTCGATCTCCTTCATGTCCTTGTCAACAGTCAGTTAGTCTATTGCATCC GAACCACGTACAAAGCGAGAGAGAGAGAGAGGACCCTCTCTTTCCGGCAA CCGAAAGCCACAATCAGAACTGCGGGAAAAAGGGGTTATCTTGTGAGGTT AGTCAGACCACTTCTTTTCTTGCTGACATCCAGGCGTTTTTGCTCATATT TCTTCTGGACATTTTCACCCCCCGAAAAGAAACAATTTGTATAAAAAGTT ACAAACGAGTTTTTCTGAACAAGAAAAAAACTTCCTTTCGCCCTCCCCCC TTTGGGGGGGGGGGGCGTGAAGGAAAAGTTCCCTGCCTCGAATGCAGTTT GTGCAGGGTTTCCTGCATGCATGCGGAGTTTTTCACGATGATATTGGTAT GCAATCACCCACACATACATGATGCAGCACGCACGCGTCACACTCGTGCG CAACACTGATTGTTACAGCTGTCACACATGGTGTTAGATGACGCCGGTAC AGCCAAGCTAGATGAATGATGCCGATGTGATAGCCGCGAGACTGCAGCCT TGTAGTTGCATCTGAAGGTGGCCATCGGCTGGGCAGCGATGACAACCTTC AGCTGTTGCTACAACGCTATTCCATGCTGCCGCCCTTCTCATGGATGACC ATGGCTACGATGATAATCCATCCCGCCAACACCTGGAAGCACGCTTCGCG GCAACGGCTGATTACACCATACACGTAATTATTTGATCTGGGAAACCATA TTTGTGCGTCACCTCCTTTGGACTGATTTGACCTGTTGACGTGCACCACG CTCCCTTCCAGCTCCATTTGATGTCATTTTGTTGGTAGTAATGACCGCAC TCAAATGAGAGTTGAGGATAGTTGCATAAATAGCCTCAACATGTGCGCGG TGGAGTTCTTATGCGCGCTATAGAAGTACGAATTGTGGCAAGTGGGTTGA CTCGACTCGTCTTCCCTACTCTTGACTATTACTATTTGTTTTTTTCGTCA GGTGGTTCGGACACGTGGGGGACCCGATCTGGTCAGTGCGAGAAGACAGT GCCACAGCTCTAGGGGCTGTGTGCAGGGCTTACGGAGAGGAGGCCTGTGA GAAGTGAGACACATGGAATATATCACATCATATCAGATGAGACGAGTGCT GTGGGGTGTGCGGGTGTGCTCAGTCAAAATAATAACATACGAGGACAATG CCGTTGTATCTGTGTTGCGCGTCTTGTGTTTCGAACTTTTTAGCTGTTAA CTGTGGGTGTGGGTGAAGCGAGGGTTTGTGAGTCATGACAGTTATTTTTT ACGGTGGTGAATGTATGTTGTACGTTAAAGCGAGCTATTTTTTAGATTAT GGGTTATGACTTTCTATTTGTACGTTTAGTTTAGTTTGTCTTTTTTTCCC CATAATTTATTTTATGGCGTGTGCCATTTTGTGCCGGTCATACTCCTCCC CCCGCTTCCCTACCAAAAATTGTTAACTCTGACCGAACGTCGTTAAGCTG CCATAAGCCATATGTCGCTCTGATTGGCCGTTATCTTGGGGTCGCTGACC CCTAGCTGACGAGGGGTCCGCAGAAGTTCCGCCGGAGGCACAAAACATAC TAAAGGGAAATTAATTAGCCTTCACATCCTTTCGAGTTTGCGCTTGAATT GTAGCCTTGAAGTAACGGCGCTTGGACCGCATGGTGGACCTGAAAACGTA TTGCTTGGTAAGTAATGAGGACCTTTGATTGTCCAGGGTATTCGCGTGGG TGAAGGAGAACTTACCGAAGGCTAGGGAGCAGCGGTCGGAAAGCGTGGCT GAGCACAAGCGCAGGCAGAATGATGCTAAGGCGCACACTGGCAACCAGGT GTATTCGTGCGGGTCCCTTGCGCCCAAGCTGAAGAAGGGAGGCTGTTCTG ACTGCGAGGTGAGGCGGCAGAGGGGTGTAGAGTGA
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Coding sequence (CDS) from alignment at H-paniculata_contig18596:627..4911-

>mRNA_H-paniculata_contig18596.4592.1 ID=mRNA_H-paniculata_contig18596.4592.1|Name=mRNA_H-paniculata_contig18596.4592.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1320bp|location=Sequence derived from alignment at H-paniculata_contig18596:627..4911- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TACTACCTTGCGGACGGCGTAAAGCTGTTTTCGCAGGAAACGTGGCGGAT
GTTCATGGGGGAGGTCGGGCGGGACATGGTGGGCAAGTACGCGGCGGATG
TGACGGACTATTACTGCATGGCGAGCGAGCTGGACAACCACTGTGTCCGC
GAGTCGGCGTGCCACAGCATCGCTGAGATGGCGGAAAAGTACTACCTTGC
GGACGGCGTAAAGCTGTTTTCGCAGGAAACGTGGCGGATGTTCATGGGGG
AGGTCGGGCGGGACATGGTGGGCAAGTACGCGGCGGATGTGACGGACTAT
TACTGCATGGCGAGCGAGCTGGACAACCACTGTGTCCGCGAGTCGGCGTG
CCACAGCATCGCTGAGATGGCGGAAAAGGTTGCTCCCACGTACCTGGCCC
ATCATGTGGATCGGCTGCTCAAGGCCCTCTTGGTGTGTTTCTTCGATGAG
AGCTGGCCAGTCAGGGACGCCGCATGCGTGGCCAGTGGACGCTTTGCAGA
AGCCTACCCTGAGGAGTGCCGTCCCAGCTTGGACAAACTCTATGAAAGGT
TGCTCCCACGTACCTGGCCCATCATGTGGATCGGCTGCTCAAGGCCCTCT
TGGTGTGTTTCTTCGATGAGAGCTGGCCAGTCAGGGACGCCGCATGCGTG
GCCAGTGGACGCTTTGCAGAAGCCTACCCTGAGGAGTGCCGTCCCAGCTT
GGACAAACTCTATGAAAGGTGGTTCGGACACGTGGGGGACCCGATCTGGT
CAGTGCGAGAAGACAGTGCCACAGCTCTAGGGGCTGTGTGCAGGGCTTAC
GGAGAGGAGGCCTGTGAGAAGTGGTTCGGACACGTGGGGGACCCGATCTG
GTCAGTGCGAGAAGACAGTGCCACAGCTCTAGGGGCTGTGTGCAGGGCTT
ACGGAGAGGAGGCCTGTGAGAAGGTATTCGCGTGGGTGAAGGAGAACTTA
CCGAAGGCTAGGGAGCAGCGGTCGGAAAGCGTGGCTGAGCACAAGCGCAG
GCAGAATGATGCTAAGGCGCACACTGGCAACCAGGTGTATTCGTGCGGGT
CCCTTGCGCCCAAGCTGAAGAAGGGAGGCTGTTCTGACTGCGAGGTGAGG
CGGCAGAGGGGTGTAGAGTGAGGTATTCGCGTGGGTGAAGGAGAACTTAC
CGAAGGCTAGGGAGCAGCGGTCGGAAAGCGTGGCTGAGCACAAGCGCAGG
CAGAATGATGCTAAGGCGCACACTGGCAACCAGGTGTATTCGTGCGGGTC
CCTTGCGCCCAAGCTGAAGAAGGGAGGCTGTTCTGACTGCGAGGTGAGGC
GGCAGAGGGGTGTAGAGTGA
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