mRNA_H-paniculata_contig18596.4592.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig18596.4592.1 vs. uniprot
Match: D7FV62_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FV62_ECTSI) HSP 1 Score: 348 bits (893), Expect = 9.890e-114 Identity = 186/214 (86.92%), Postives = 199/214 (92.99%), Query Frame = 1
Query: 1 YYLADGVKLFSQETWRMFMGEVGRDMVGKYAADVTDYYCMASELDNHCVRESACHSIAEMAEKVAPTYLAHHVDRLLKALLVCFFDESWPVRDAACVASGRFAEAYPEECRPSLDKLYERWFGHVGDPIXXXXXXXXXXXXXXXXXXXEEACEKVFAWVKENLPKAREQRSESVAEHKRRQNDAKAHTGNQVYSCGSLAPKLKKGGCSDCEVRR 642
YYLADGVKLFSQETWRMFMGE GR+MVGKYA DVTDYYCMASELDNHCVRESACHSIAEMAEKVAP YLA HVDRLLKALLVCFFDESWPVRDAACVASGRFA AYPEECRPSL+KLYERWF HVGDPIXXXXXXXXXXXXXXXXXXX EA +KV AWV ENLP+A++Q +ES +H+R+ NDAKAHTGNQV+SCGSLAPKL+KGGCSDC+V R
Sbjct: 305 YYLADGVKLFSQETWRMFMGEEGREMVGKYAQDVTDYYCMASELDNHCVRESACHSIAEMAEKVAPQYLATHVDRLLKALLVCFFDESWPVRDAACVASGRFAGAYPEECRPSLEKLYERWFRHVGDPIXXXXXXXXXXXXXXXXXXXXEAYDKVSAWVTENLPRAKQQGAESAEQHRRKHNDAKAHTGNQVFSCGSLAPKLRKGGCSDCQVTR 518
BLAST of mRNA_H-paniculata_contig18596.4592.1 vs. uniprot
Match: A0A835YU79_9STRA (Armadillo-type protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YU79_9STRA) HSP 1 Score: 253 bits (647), Expect = 4.920e-77 Identity = 126/214 (58.88%), Postives = 148/214 (69.16%), Query Frame = 1
Query: 1 YYLADGVKLFSQETWRMFMGEVGRDMVGKYAADVTDYYCMASELDNHCVRESACHSIAEMAEKVAPTYLAHHVDRLLKALLVCFFDESWPVRDAACVASGRFAEAYPEECRPSLDKLYERWFGHVGDPIXXXXXXXXXXXXXXXXXXXEEACEKVFAWVKENLPKAREQRSESVAEHKRRQNDAKAHTGNQVYSCGSLAPKLKKGGCSDCEVRR 642
YY+A+GVKL+SQETWR ++ GR MV K+A V YY ++ +NH VRE+ACH IAEMA KV +A HV LL+ALL+CF DESWPVRDAACVASGRFA A+PEECR L L+ERWF H+ +PI EA ++ AWVKE LPKAREQ +++ E K QNDAKAHT Q YSCGSLAPKLKKGGCSDCEV R
Sbjct: 300 YYMAEGVKLYSQETWRRYLDGEGRTMVAKHAPAVVAYYVAMTDANNHVVREAACHCIAEMAAKVDHAAIAPHVPALLRALLICFKDESWPVRDAACVASGRFAAAFPEECREQLPLLFERWFKHLAEPIWSVREDSAAALGEVCAAYGREAIDRCLAWVKEMLPKAREQPAQTYEEMKAMQNDAKAHTDKQRYSCGSLAPKLKKGGCSDCEVTR 513
BLAST of mRNA_H-paniculata_contig18596.4592.1 vs. uniprot
Match: A0A7S2V715_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V715_9STRA) HSP 1 Score: 213 bits (543), Expect = 1.300e-64 Identity = 115/242 (47.52%), Postives = 142/242 (58.68%), Query Frame = 1
Query: 1 YYLADGVKLFSQETWRMFMGEVGRDMVGKYAADVTDYYCMASELDNHCVRESACHSIAEMAEKVAPTYLAHHVDRLLKALLVCFFDESWPVRDAACVASGRFAEAYPEECRP-------------------------SLDKLYERWFGHVGDPIXXXXXXXXXXXXXXXXXXXEEACEKVFAWVKENLPKAREQRSESVAEHKRRQNDAKAHTGNQVYSCGSLAPKLKKGG---CSDCEVRR 642
YYLA+GVKL+SQ+TW++ + GR V + A V YY +E DNH VRE+ACH+IAE A K+ A V LL+ALLVCF+DESWPVRDAACVASG FA AYP++CR L++LYERWF HV DP+ EE +V A++K++L AR Q + + + K ND AHTGNQVYSCGSLAPKLK+GG CSDC V R
Sbjct: 1 YYLAEGVKLYSQDTWKIVFKDQGRARVAEQAGQVARYYISTTEKDNHVVREAACHAIAEYAVKIDKDAAAPFVSDLLEALLVCFYDESWPVRDAACVASGTFAAAYPDQCRERRQPALEEEGGQQTGEVKAEAEVPTQLERLYERWFAHVSDPVWSVREDSAVALGQVCAAYGEEGLARVVAYLKDHLDDARSQPNLTPEQFKFSHNDHAAHTGNQVYSCGSLAPKLKRGGRKGCSDCTVTR 242
BLAST of mRNA_H-paniculata_contig18596.4592.1 vs. uniprot
Match: A0A1E7FDE2_9STRA (ARM repeat-containing protein n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FDE2_9STRA) HSP 1 Score: 192 bits (489), Expect = 2.360e-53 Identity = 120/227 (52.86%), Postives = 153/227 (67.40%), Query Frame = 1
Query: 1 YYLADGVKLFSQETWRMFMGEVGRDMVGKYAADVTDYYCMASELDNHCVRESACHSIAEMAEKVA-----PTYLAHHVDRLLKALLVCFFDESWPVRDAACVASGRFAEAYPEECRPSLDKLYERWFGHVGDPIXXXXXXXXXXXXXXXXXXXEEACEKVFAWVKENLPKAREQRSESVAEHKRRQNDAKAHTGNQVYSCGSLAPKLKKG------GCSDCEVRRQR 648
+YLA GVKL+S +TW++ E G V K A + YY + DNH VRE+AC ++AE+A K+ L HV LL+ALL+CF DESWPVRD AC+A G F AYPEECRP L+ L+ RW + D XXXXXXXXXXXXXXXXXXX+E +++ A++KENLP A+ Q +++ E K QN+ +AHT NQ+YSCGSLAPKLKK GC +CEV R +
Sbjct: 353 FYLAQGVKLYSHQTWKLIFPENGVQAVAKSIASIVRYYVKMCDADNHVVREAACQAVAELAVKIGRDEQHAMVLQPHVTILLQALLMCFHDESWPVRDEACLACGIFCRAYPEECRPELETLWTRWTEQLTDXXXXXXXXXXXXXXXXXXXXXKEFFDRLMAFIKENLPAAKLQPKQTMEEFKALQNNMEAHTENQLYSCGSLAPKLKKKAGAGRIGCGNCEVNRPK 579
BLAST of mRNA_H-paniculata_contig18596.4592.1 vs. uniprot
Match: B7GE47_PHATC (Predicted protein n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7GE47_PHATC) HSP 1 Score: 192 bits (487), Expect = 2.860e-53 Identity = 119/226 (52.65%), Postives = 154/226 (68.14%), Query Frame = 1
Query: 1 YYLADGVKLFSQETWRMFMGEVGRDMVGKYAADVTDYYCMASELDNHCVRESACHSIAEMAEKVA--PTY---LAHHVDRLLKALLVCFFDESWPVRDAACVASGRFAEAYPEECRPSLDKLYERWFGHVGDPIXXXXXXXXXXXXXXXXXXXEEACEKVFAWVKENLPKAREQRSESVAEHKRRQNDAKAHTGNQVYSCGSLAPKLKKGG-----CSDCEVRRQR 648
+YLA GVKL+S ETW++ + G +V V YY + DNH VRE+AC ++AE+A ++ P + L H+D LL+ALL+CF DESWPVRD AC+A G +AYPE CRP L KL+ERW G + D XXXXXXXXXXXXXXXXXX + +++ A V + LP AR Q + + E+K RQNDA AHT +Q+YSCGSLAPKL+KGG CS C+V R++
Sbjct: 368 FYLAQGVKLYSHETWKLVFVDSGVSLVAANLPAVCRYYVQMCDADNHVVREAACQAVAELAIRLGSDPNHHDELLPHMDLLLQALLMCFHDESWPVRDEACLACGLLCKAYPESCRPELGKLWERWTGQLTDXXXXXXXXXXXXXXXXXXXXGADFLQELLALVDKLLPSARSQSAMTPTEYKARQNDAAAHTDSQLYSCGSLAPKLRKGGAGRIGCSSCDVNREK 593
BLAST of mRNA_H-paniculata_contig18596.4592.1 vs. uniprot
Match: A0A061SKS1_9CHLO (Arm repeat-containing protein n=2 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SKS1_9CHLO) HSP 1 Score: 188 bits (477), Expect = 3.260e-52 Identity = 104/230 (45.22%), Postives = 134/230 (58.26%), Query Frame = 1
Query: 1 YYLADGVKLFSQETWRMFMGEVGRDMVGKYAADVTDYYCMASELDNHCVRESACHSIAEMAEKVAPTYLAHHVDRLLKALLVCFFDESWPVRDAACVASGRFAEAYPEECRPSLDKLYERWFGHVGDPIXXXXXXXXXXXXXXXXXXXEEACEKVFAWVKENLPKAREQRSES-------------VAEHKRRQNDAKAHTGNQVYSCGSLAPKLKKG-GCSDCEVRRQR 648
YY+A+GV+L+SQETWR+ MG+ GR+ K+A +V YY S+ +NH VRE+AC IAE+ KV + HV RLL ALL+ F D SWPVRDAACVA+GR A+ EE P LD LYE WF H+ D I +EA +K+ +K LP A+EQ SES VA + R ND HT ++SCGSLAPKL++G GC D R++
Sbjct: 310 YYVAEGVRLYSQETWRLVMGDGGREWTAKFANEVVSYYIAQSKANNHAVREAACACIAELMVKVDSDAVRPHVSRLLGALLLAFKDASWPVRDAACVATGRCVGAFKEETLPMLDDLYELWFAHLWDNIPSVREDSAVALGNVVRSYGQEAVDKIVEKMKVMLPHAKEQPSESHRYAGLDNTTTFGVAAKRARDNDEALHTNQTMFSCGSLAPKLQRGSGCMDHGFSREK 539
BLAST of mRNA_H-paniculata_contig18596.4592.1 vs. uniprot
Match: A0A7S2UBJ5_9STRA (Hypothetical protein n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A7S2UBJ5_9STRA) HSP 1 Score: 187 bits (474), Expect = 5.350e-52 Identity = 114/227 (50.22%), Postives = 150/227 (66.08%), Query Frame = 1
Query: 1 YYLADGVKLFSQETW-RMFMGEVGRDMVGKYAADVTDYYCMASELDNHCVRESACHSIAEMAEKVAPT-----YLAHHVDRLLKALLVCFFDESWPVRDAACVASGRFAEAYPEECRPSLDKLYERWFGHVGDPIXXXXXXXXXXXXXXXXXXXEEACEKVFAWVKENLPKAREQRSESVAEHKRRQNDAKAHTGNQVYSCGSLAPKLKKGG-----CSDCEVRRQR 648
+YLA GVKL+S ETW ++F G + + K+A V YY + DNH VRE+AC ++AE+A+K+ YLA V LL+ALL+CF DESWPVRD AC+A G F +AYPEECRP L L+ RW H+ XXXXXXXXXXXXXXXXX E++ ++ LP A++Q + E+K+ QND +H+ +Q+YSCGSLAPKL+KGG CSDC + R +
Sbjct: 249 FYLAQGVKLYSHETWFQLFQTRNGMEAIAKHAGPVCRYYIKMCDADNHVVREAACQAVAELAQKLGSNPEYAHYLAPFVPMLLQALLMCFHDESWPVRDEACLACGTFCKAYPEECRPELPTLFSRWTEHLTXXXXXXXXXXXXXXXXXXXXYGPPMVEQILDVLRTQLPSAKDQPPMTREEYKQNQNDIDSHSNSQLYSCGSLAPKLRKGGAGRIGCSDCAITRPK 475
BLAST of mRNA_H-paniculata_contig18596.4592.1 vs. uniprot
Match: B8BVW3_THAPS (Uncharacterized protein n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BVW3_THAPS) HSP 1 Score: 187 bits (475), Expect = 2.940e-51 Identity = 124/246 (50.41%), Postives = 154/246 (62.60%), Query Frame = 1
Query: 1 YYLADGVKLFSQETWRMFMGEV--------------------GRDMVGKYAADVTDYYCMASELDNHCVRESACHSIAEMAEKVAP-----TYLAHHVDRLLKALLVCFFDESWPVRDAACVASGRFAEAYPEECRPSLDKLYERWFGHVGDPIXXXXXXXXXXXXXXXXXXXEEACEKVFAWVKENLPKAREQRSESVAEHKRRQNDAKAHTGNQVYSCGSLAPKLKKGG-----CSDCEVRRQR 648
+YLA GVKL+SQ+TW++ G G V + AA + YY + DNH VRE+ C IAE+A+KV YL+ +V LL+ALL+CF DESWPVRD AC+A G F AYPEEC P L+ L+ERW + XXXXXXXXXXXXXXXXXXX++ EKV V++ LP A++Q + S E+K+ QND AHTGNQVYSCGSLAPKL+KGG CS C V R +
Sbjct: 466 FYLAQGVKLYSQDTWKIIFGSSHNAAEGEEGLHSSGKSKGGGGMGAVARNAAPLCRYYSKMCDADNHAVREAGCQGIAELAQKVGKHPLYADYLSPYVTMLLQALLMCFHDESWPVRDEACLACGTFCIAYPEECTPELNTLFERWTEQLTXXXXXXXXXXXXXXXXXXXXXXQDMFEKVLGVVRKQLPAAKDQPAMSREEYKKLQNDVSAHTGNQVYSCGSLAPKLRKGGAGRIGCSSCLVDRPK 711
BLAST of mRNA_H-paniculata_contig18596.4592.1 vs. uniprot
Match: A0A7S2EMR0_TRICV (Hypothetical protein (Fragment) n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S2EMR0_TRICV) HSP 1 Score: 182 bits (462), Expect = 4.750e-51 Identity = 122/238 (51.26%), Postives = 151/238 (63.45%), Query Frame = 1
Query: 1 YYLADGVKLFSQETWRMFMGEVGR----DMVGKYAADVTDYYCMASELDNHCVRESACHSIAEMAEKVA--PTY---LAHHVDRLLKALLVCFFDESWPVRDAACVASGRFAEAYPEECRPSLDKLYERWFGHVGDPIXXXXXXXXXXXXXXXXXXXEEACEKVFAWVKENLPKAREQRSESVAEHKRRQNDAKAHTGNQVYSCGSLAPKLKKG-------------GCSDCEVRRQR 648
+YLA GVKL+S +TWR+ G+ + V A V YY + DNH VRE+AC ++AE+A K+ P + L++ V LL+ALL CF DESWPVRD AC+A G F AYPEECRP LD L+ RW + D XXXXXXXXXXXXXXXXXX E E+V +++ +P AR Q S E+KRRQND +AH+ Q+YSCGSLAPKLKKG GC +CEV R R
Sbjct: 172 FYLAQGVKLYSHDTWRIVFPPGGKRSGLEAVADCAGAVCRYYVKMCDADNHVVREAACQAVAELASKIGSHPLHSASLSNFVPLLLQALLTCFHDESWPVRDEACLACGTFCVAYPEECRPELDVLFGRWTEQLTDXXXXXXXXXXXXXXXXXXXXGAEMHERVLGVLRDAIPGARRQAPMSREEYKRRQNDIEAHSDGQLYSCGSLAPKLKKGSAIGRDAPGKGRIGCGNCEVDRPR 409
BLAST of mRNA_H-paniculata_contig18596.4592.1 vs. uniprot
Match: UPI001C917B12 (uncharacterized protein LOC122388790 isoform X1 n=6 Tax=Amphibalanus amphitrite TaxID=1232801 RepID=UPI001C917B12) HSP 1 Score: 184 bits (467), Expect = 5.400e-51 Identity = 98/228 (42.98%), Postives = 137/228 (60.09%), Query Frame = 1
Query: 1 YYLADGVKLFSQETWRMFMGEVGRDMVGKYAADVTDYYCMASELDNHCVRESACHSIAEMAEKVAPTYLAHHVDRLLKALLVCFFDESWPVRDAACVASGRFAEAYPEECRPSLDKLYERWFGHVGDPIXXXXXXXXXXXXXXXXXXXEEACEKVFAWVKENLPKAREQRSES--------VAEHKR-RQNDAKAHTGNQVYSCGSLAPKLKKGGCSDCEVRRQRGVE 657
YY+A+GVK+++Q TW G+ GR++V +Y DV +YY +A+ +NH VRE+AC+ I E+ +K++P LA + +R+L ALLVCF D+SWPVRD AC+A GR A+PE CRP LD+LY F ++ D I E+A V V+E+L +++ S AE K+ R ND + HT +YSCGSLAPK+ GGCS C R +R VE
Sbjct: 293 YYVAEGVKIYNQRTWETIAGQRGRELVEQYINDVVEYYLVATTAENHAVREAACYCITELLKKLSPQTLAPYAERVLDALLVCFQDDSWPVRDTACLAVGRLLVAFPETCRPHLDRLYPLLFSNLHDNIPSVRQGGAEALANAVRAYGEQALTLVMNRVREDLTALKDEPEPSGPAAAPGGYAERKQQRDNDEQLHTNQTMYSCGSLAPKMAAGGCSACH-RFRRPVE 519 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig18596.4592.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig18596.4592.1 >prot_H-paniculata_contig18596.4592.1 ID=prot_H-paniculata_contig18596.4592.1|Name=mRNA_H-paniculata_contig18596.4592.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=220bp YYLADGVKLFSQETWRMFMGEVGRDMVGKYAADVTDYYCMASELDNHCVRback to top mRNA from alignment at H-paniculata_contig18596:627..4911- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig18596.4592.1 ID=mRNA_H-paniculata_contig18596.4592.1|Name=mRNA_H-paniculata_contig18596.4592.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4285bp|location=Sequence derived from alignment at H-paniculata_contig18596:627..4911- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig18596:627..4911- >mRNA_H-paniculata_contig18596.4592.1 ID=mRNA_H-paniculata_contig18596.4592.1|Name=mRNA_H-paniculata_contig18596.4592.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1320bp|location=Sequence derived from alignment at H-paniculata_contig18596:627..4911- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |