mRNA_H-paniculata_contig18412.4521.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig18412.4521.1 vs. uniprot
Match: UPI0020246435 (hypothetical protein n=2 Tax=Proteus mirabilis TaxID=584 RepID=UPI0020246435) HSP 1 Score: 151 bits (381), Expect = 1.310e-38 Identity = 85/254 (33.46%), Postives = 146/254 (57.48%), Query Frame = 1
Query: 70 DPKNHRDAQASPEWEHWERAEEVEMQGVIDNGIWTQVERPNNKLIMSTMMLYKRIIDEDGKVEKYKCRLVAHGNRQIKGIHFQEASSPALVAVSTKITLSLAVIQDWELRHVDFELAYLQAPIDQEIFIEILVGYREFPGA--VRRLDKAIYG*VQAGRCWSMKVTADLTAKGFEQSHADPCLFLKIVDEKVVAVIIIYVDDLLISTKGSKIMDELLVDLRLNHKLTDLGDARYYLGCCHITRDRKKRQLEIDQ 825
+P N+ +A SP+ W A + EM + +N +WT V+ P+++ + ++K+ D DG V YK RLVA G RQ++GI + E SP + S +I L++A D+E+ +D + A+L +++E+++ G+ + GA V +L ++IYG VQA R W+ + + + A GF Q+ + C++ K+ V A +I+YVDD+L+ + +D + L + + DLG+A Y LG I RDR +R + + Q
Sbjct: 7 EPTNYEEAMVSPDSAKWLEAMKSEMGSMYENKVWTLVDLPDDRQAIENKWIFKKKTDADGNVTVYKARLVAKGFRQVQGIDYDETFSPVAMLKSVRIMLAIAAFYDYEIWQMDVKTAFLNGFLEEELYMMQPEGFVDPKGANKVCKLQRSIYGLVQASRSWNKRFDSVIKAYGFIQTFGEACIYKKVSGSSV-AFLILYVDDILLIGNDIEFLDSIKGYLNKSFSMKDLGEAAYILGI-KIYRDRSRRLIGLSQ 258
BLAST of mRNA_H-paniculata_contig18412.4521.1 vs. uniprot
Match: A0A446P200_TRITD (Uncharacterized protein n=2 Tax=cellular organisms TaxID=131567 RepID=A0A446P200_TRITD) HSP 1 Score: 152 bits (384), Expect = 4.830e-38 Identity = 85/254 (33.46%), Postives = 146/254 (57.48%), Query Frame = 1
Query: 70 DPKNHRDAQASPEWEHWERAEEVEMQGVIDNGIWTQVERPNNKLIMSTMMLYKRIIDEDGKVEKYKCRLVAHGNRQIKGIHFQEASSPALVAVSTKITLSLAVIQDWELRHVDFELAYLQAPIDQEIFIEILVGYREFPGA--VRRLDKAIYG*VQAGRCWSMKVTADLTAKGFEQSHADPCLFLKIVDEKVVAVIIIYVDDLLISTKGSKIMDELLVDLRLNHKLTDLGDARYYLGCCHITRDRKKRQLEIDQ 825
+P N+ +A SP+ W A + EM + +N +WT V+ P+++ + ++K+ D DG V YK RLVA G RQ++G+ + E P + S +I L++A D+E+ +D + A+L +++E+++ L G+ + GA V +L ++IYG VQA R W+ + + + A GF Q+ + C++ K+ V A +I+YVDD+L+ K +D + L + + DLG+A Y LG I RDR +R + + Q
Sbjct: 805 EPTNYEEAMVSPDSAKWLEAMKSEMGSMYENKVWTLVDLPDDRQAIENKWIFKKKTDADGNVTVYKARLVAKGFRQVQGVDYDETFLPVAMLKSVRIMLAIAAFYDYEIWQMDVKTAFLNGFLEEELYMMQLEGFVDPKGANKVCKLQRSIYGLVQASRSWNKRFDSVIKAFGFIQTFGEACIYKKVSGSSV-AFLILYVDDILLIGNDIKFLDSIKGYLNKSFSMKDLGEAAYILGI-KIYRDRSRRLIGLSQ 1056
BLAST of mRNA_H-paniculata_contig18412.4521.1 vs. uniprot
Match: UPI0020240260 (hypothetical protein n=1 Tax=Proteus mirabilis TaxID=584 RepID=UPI0020240260) HSP 1 Score: 144 bits (363), Expect = 2.170e-37 Identity = 80/254 (31.50%), Postives = 143/254 (56.30%), Query Frame = 1
Query: 70 DPKNHRDAQASPEWEHWERAEEVEMQGVIDNGIWTQVERPNNKLIMSTMMLYKRIIDEDGKVEKYKCRLVAHGNRQIKGIHFQEASSPALVAVSTKITLSLAVIQDWELRHVDFELAYLQAPIDQEIFIEILVGYREFPGA--VRRLDKAIYG*VQAGRCWSMKVTADLTAKGFEQSHADPCLFLKIVDEKVVAVIIIYVDDLLISTKGSKIMDELLVDLRLNHKLTDLGDARYYLGCCHITRDRKKRQLEIDQ 825
+P N+ +A A P+ + W A + E+ + +N +WT + P+++ + ++K+ D DG V YK RLVA G RQ++G+ + E SP S +I L++A D+E+ +D + A+L + +E+++ G+ + A V +L ++IYG VQA R W+++ + A GF Q++ + C++ K+ V A +I+YVDD+L+ + ++ + L + DLG+A Y LG I RDR +R + + Q
Sbjct: 15 EPSNYEEAMAGPDSDKWLEAMKSEIGSMYENEVWTLTDLPDDRRAIENKWIFKKKTDADGNVTIYKARLVAKGYRQVQGVDYDETFSPVAKLKSVRIMLAIAAFYDYEIWQMDVKTAFLNGFLKEELYMMQPEGFVDPKNADKVCKLQRSIYGLVQASRSWNIRFDEMIKAFGFTQTYGEACVYKKVSGSSV-AFLILYVDDILLMGNDIEFLESIKAYLNKCFSMKDLGEAAYILGI-KIYRDRSRRLIGLSQ 266
BLAST of mRNA_H-paniculata_contig18412.4521.1 vs. uniprot
Match: UPI002025A47D (hypothetical protein n=1 Tax=Proteus mirabilis TaxID=584 RepID=UPI002025A47D) HSP 1 Score: 147 bits (371), Expect = 3.840e-37 Identity = 81/254 (31.89%), Postives = 144/254 (56.69%), Query Frame = 1
Query: 70 DPKNHRDAQASPEWEHWERAEEVEMQGVIDNGIWTQVERPNNKLIMSTMMLYKRIIDEDGKVEKYKCRLVAHGNRQIKGIHFQEASSPALVAVSTKITLSLAVIQDWELRHVDFELAYLQAPIDQEIFIEILVGYREFPGA--VRRLDKAIYG*VQAGRCWSMKVTADLTAKGFEQSHADPCLFLKIVDEKVVAVIIIYVDDLLISTKGSKIMDELLVDLRLNHKLTDLGDARYYLGCCHITRDRKKRQLEIDQ 825
+P N+ +A A P+ W A + E++ + +N +WT + P+++ + ++K+ D DG V YK RLVA G RQ++G+ + E SP S +I L++A D+E+ +D + A+L + +E+++ G+ + A V +L ++IYG VQA R W+++ + A GF Q++ + C++ K+ V A +I+YVDD+L+ +++D + L + DLG+A Y LG I RDR +R + + Q
Sbjct: 15 EPSNYEEAMAGPDSNKWLEAMKSEIESMYENKVWTLTDLPDDRRAIENKWIFKKKTDADGNVTIYKARLVAKGYRQVQGVDYDETFSPVAKLKSVRIMLAIAAYYDYEIWQMDVKTAFLNGHLKEELYMMQPEGFVDPKNANKVCKLQRSIYGLVQASRSWNIRFDEMIKAFGFMQTYGEACVYKKVSGSSV-AFLILYVDDILLMGNDIELLDSIKAYLNKCFSMKDLGEAAYILGI-KIYRDRSRRLIGLSQ 266
BLAST of mRNA_H-paniculata_contig18412.4521.1 vs. uniprot
Match: A0A1M2V3W8_TRAPU (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2V3W8_TRAPU) HSP 1 Score: 148 bits (374), Expect = 9.240e-37 Identity = 90/253 (35.57%), Postives = 142/253 (56.13%), Query Frame = 1
Query: 70 DPKNHRDAQASPEWEHWERAEEVEMQGVIDNGIWTQVERPNNKLIMSTMMLYKRIIDEDGKVEKYKCRLVAHGNRQIKGIHFQEASSPALVAVSTKITLSLAVIQDWELRHVDFELAYLQAPIDQEIFIEILVGYREFPGAVRRLDKAIYG*VQAGRCWSMKVTADLTAK-GFEQSHADPCLFLKIVDEKVVAVIIIYVDDLLISTKGSKIMDELLVDLRLNHKLTDLGDARYYLGCCHITRDRKKRQLEIDQ 825
+P+ +AQA+PEW W+RA + E+ + G + + P + + +Y+ D DG++ +YK RLVA G Q G+ + E +P + S ++ L++A ++ EL D AYL A +D+EI++ GY E + RL KA+YG QAG W+ + LTA GF++ ++DPC++LK K + ++ ++VDD+ +MD L L ++K+TDLG R LG I+RDRKKR L I Q
Sbjct: 14 EPRTLSEAQAAPEWPEWKRAMDDEIAQLRKLGTYAPADLPAGRKPIGCRWVYRLKRDSDGRIVRYKARLVAQGFSQAPGLDYFETFAPVIRTDSLRLLLAIAAERNMELAQFDVVGAYLNADLDEEIYMRQPPGYEEGSSPIVRLRKALYGLKQAGXQWNHHINKVLTADLGFQRLNSDPCVYLK-KSPKGLTIVGMHVDDMAALADTPDLMDTLRSGLARHYKITDLGTPRLLLGF-EISRDRKKRTLSIKQ 264
BLAST of mRNA_H-paniculata_contig18412.4521.1 vs. uniprot
Match: A0A8I7BEN6_HORVV (Uncharacterized protein n=26 Tax=cellular organisms TaxID=131567 RepID=A0A8I7BEN6_HORVV) HSP 1 Score: 147 bits (371), Expect = 2.610e-36 Identity = 81/254 (31.89%), Postives = 145/254 (57.09%), Query Frame = 1
Query: 70 DPKNHRDAQASPEWEHWERAEEVEMQGVIDNGIWTQVERPNNKLIMSTMMLYKRIIDEDGKVEKYKCRLVAHGNRQIKGIHFQEASSPALVAVSTKITLSLAVIQDWELRHVDFELAYLQAPIDQEIFIEILVGYREFPGA--VRRLDKAIYG*VQAGRCWSMKVTADLTAKGFEQSHADPCLFLKIVDEKVVAVIIIYVDDLLISTKGSKIMDELLVDLRLNHKLTDLGDARYYLGCCHITRDRKKRQLEIDQ 825
+P N+ +A A P+ W A + E+ + +N +WT V+ P+ + + ++K+ D +G V YK RLVA G RQI+G+ ++E SP S +I L++A D+E+ +D + A+L + +E+++ G+ + GA V +L ++IYG VQA R W+++ + A GF Q + + C++ K+ V A +++YVDD+L+ ++++ + L + + DLG+A Y LG I RDR +R + + Q
Sbjct: 804 EPSNYEEAMAGPDSNKWLEAMKSEIGSMYENKVWTLVDLPDERQAIENKWIFKKKTDANGNVTVYKARLVAKGFRQIQGVDYEETFSPVAKLKSVRIMLAIAAFYDYEIWQMDVKTAFLNGNLKEELYMMQPEGFVDPKGANKVCKLQRSIYGLVQASRSWNIRFNEVIKAFGFIQVYGEACMYKKVSGSSV-AFLVLYVDDILLMGNDIEMLESIKAYLNKSFSMKDLGEAAYILGI-KIYRDRSRRLIGLSQ 1055
BLAST of mRNA_H-paniculata_contig18412.4521.1 vs. uniprot
Match: UPI002025788D (hypothetical protein n=2 Tax=Proteus mirabilis TaxID=584 RepID=UPI002025788D) HSP 1 Score: 146 bits (369), Expect = 2.920e-36 Identity = 81/254 (31.89%), Postives = 144/254 (56.69%), Query Frame = 1
Query: 70 DPKNHRDAQASPEWEHWERAEEVEMQGVIDNGIWTQVERPNNKLIMSTMMLYKRIIDEDGKVEKYKCRLVAHGNRQIKGIHFQEASSPALVAVSTKITLSLAVIQDWELRHVDFELAYLQAPIDQEIFIEILVGYREFPGA--VRRLDKAIYG*VQAGRCWSMKVTADLTAKGFEQSHADPCLFLKIVDEKVVAVIIIYVDDLLISTKGSKIMDELLVDLRLNHKLTDLGDARYYLGCCHITRDRKKRQLEIDQ 825
+P N+ +A A P+ + W A + E+ + +N +WT + P+++ + ++K+ D DG V YK RLVA G RQ++G+ + E SP S +I L++A D+E+ +D + A+L + +E+++ G+ + A V +L ++IYG VQA R W+++ + A GF Q++ + C++ K+ V A +I+YVDD+L+ +++D + L + DLG+A Y LG I RDR +R + + Q
Sbjct: 191 EPSNYEEAMAGPDSDKWLEAMKSEIGSMYENEVWTLTDLPDDRRAIENKWIFKKKTDADGNVTIYKARLVAKGYRQVQGVDYDETFSPVAKLKSVRIMLAIAAFYDYEIWQMDVKTAFLNGFLKEELYMMQPEGFVDPKNADKVCKLQRSIYGLVQASRSWNIRFDEMIKAFGFTQTYGEACVYKKVSGSSV-AFLILYVDDILLMGNDIELLDSIKAYLNKCFSMKDLGEAAYILGI-KIYRDRSRRLIGLSQ 442
BLAST of mRNA_H-paniculata_contig18412.4521.1 vs. uniprot
Match: A0A0V0IWV1_SOLCH (Putative ovule protein n=1 Tax=Solanum chacoense TaxID=4108 RepID=A0A0V0IWV1_SOLCH) HSP 1 Score: 140 bits (352), Expect = 2.170e-35 Identity = 83/236 (35.17%), Postives = 135/236 (57.20%), Query Frame = 1
Query: 70 DPKNHRDAQASPEWEHWERAEEVEMQGVIDNGIWTQVERPNNKLIMSTMMLYKRIIDEDGKVEKYKCRLVAHGNRQIKGIHFQEASSPALVAVSTKITLSLAVIQDWELRHVDFELAYLQAPIDQEIFIEILVGYR-EFPGAVRRLDKAIYG*VQAGRCWSMKVTADLTAKGFEQSHADPCLFLKIVDEKVVAVIIIYVDDLLISTKGSKIMDELLVDLRLNHKLTDLGDARYYLG 774
+P ++A + EW RA + E+ + N WT V+ P K + + +YK + +G+VE+YK RLVA G Q +G+ + E SP V+ + T+ + QDW L +D A+LQ + +++++E+ G++ + V +L K++YG QA R W+ K+T L + G+ QS D LF K D + +AVI+IYVDDLLI+ +K++ EL L K+ DLG +++LG
Sbjct: 12 EPATFKEASSCKEWV---RAMQDEVNALEQNATWTVVDLPPGKKAIGSKWVYKVELQANGQVERYKARLVAKGYNQQEGLDYHETFSPVAKMVTVRTTIGVVASQDWPLYQMDVHNAFLQGDLLEDVYMEMPQGFQTQGENKVCKLLKSLYGLKQASRQWNQKLTEALLSIGYSQSSYDYSLFTKR-DGEDIAVILIYVDDLLITGNSNKLIQELKDSLHSRFKMKDLGVLKFFLG 243
BLAST of mRNA_H-paniculata_contig18412.4521.1 vs. uniprot
Match: UPI00202469D1 (DDE-type integrase/transposase/recombinase n=3 Tax=Gammaproteobacteria TaxID=1236 RepID=UPI00202469D1) HSP 1 Score: 144 bits (363), Expect = 2.850e-35 Identity = 80/254 (31.50%), Postives = 143/254 (56.30%), Query Frame = 1
Query: 70 DPKNHRDAQASPEWEHWERAEEVEMQGVIDNGIWTQVERPNNKLIMSTMMLYKRIIDEDGKVEKYKCRLVAHGNRQIKGIHFQEASSPALVAVSTKITLSLAVIQDWELRHVDFELAYLQAPIDQEIFIEILVGYREFPGA--VRRLDKAIYG*VQAGRCWSMKVTADLTAKGFEQSHADPCLFLKIVDEKVVAVIIIYVDDLLISTKGSKIMDELLVDLRLNHKLTDLGDARYYLGCCHITRDRKKRQLEIDQ 825
+P N+ +A A P+ + W A + E+ + +N +WT + P+++ + ++K+ D DG V YK RLVA G RQ++G+ + E SP S +I L++A D+E+ +D + A+L + +E+++ G+ + A V +L ++IYG VQA R W+++ + A GF Q++ + C++ K+ V A +I+YVDD+L+ + ++ + L + DLG+A Y LG I RDR +R + + Q
Sbjct: 474 EPSNYEEAMAGPDSDKWLEAMKSEIGSMYENEVWTLTDLPDDRRAIENKWIFKKKTDADGNVTIYKARLVAKGYRQVQGVDYDETFSPVAKLKSVRIMLAIAAFYDYEIWQMDVKTAFLNGFLKEELYMMQPEGFVDPKNADKVCKLQRSIYGLVQASRSWNIRFDEMIKAFGFTQTYGEACVYKKVSGSSV-AFLILYVDDILLMGNDIEFLESIKAYLNKCFSMKDLGEAAYILGI-KIYRDRSRRLIGLSQ 725
BLAST of mRNA_H-paniculata_contig18412.4521.1 vs. uniprot
Match: G7E3S6_MIXOS (Integrase catalytic domain-containing protein n=1 Tax=Mixia osmundae (strain CBS 9802 / IAM 14324 / JCM 22182 / KY 12970) TaxID=764103 RepID=G7E3S6_MIXOS) HSP 1 Score: 142 bits (359), Expect = 1.020e-34 Identity = 85/254 (33.46%), Postives = 147/254 (57.87%), Query Frame = 1
Query: 73 PKNHRDAQASPEWEHWERAEEVEMQGVIDNGIWTQVERPNNKLIMSTMMLYKRIIDEDGKVEKYKCRLVAHGNRQIKGIHFQEASSPALVAVSTKITLSLAVIQDWELRHVDFELAYLQAPIDQEIFIEILVGYREFPGA---VRRLDKAIYG*VQAGRCWSMKVTADLTAKGFEQSHADPCLFLKIVDEKVVAVIIIYVDDLLISTKGSKIMDELLVDLRLNHKLTDLGDARYYLGCCHITRDRKKRQLEIDQ 825
P+N ++A ASP+ ++W+ A + E + + N +W VE P + + T+ ++ +DE G+V +YK RLVA G RQI G+ + E S+ + + L+LA +D+EL D A+L +P++++I+I+ Y PG V +L KAIYG QAG W ++ L A G +Q+ ADP ++ K + + ++ V+I+YVDDLLI++ + EL+ L + +G+ + +LG ++R+R R + + Q
Sbjct: 764 PRNVKEALASPQADYWKDAMDAEYESMAANKVWELVELPPGRKAIDTLFVFATKVDEKGEVYRYKARLVAKGYRQIPGVDYFETSASVASLPAVRTVLALAASRDYELIQADITSAFLNSPLEEDIYIKQQADYT-VPGQETLVCKLKKAIYGLKQAGLAWVNTLSERLIAFGLDQTEADPNIYTKPIGDDLL-VLIVYVDDLLIASPTQSLAWELVDFLAQTFQFKRIGEPKKFLGI-ELSRNRAARTISLRQ 1014 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig18412.4521.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig18412.4521.1 >prot_H-paniculata_contig18412.4521.1 ID=prot_H-paniculata_contig18412.4521.1|Name=mRNA_H-paniculata_contig18412.4521.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=171bp MAMQVALAMPEELRSDLPVDPKNHRDAQASPEWEHWERAEEVEMQGVIDNback to top mRNA from alignment at H-paniculata_contig18412:4115..4939+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig18412.4521.1 ID=mRNA_H-paniculata_contig18412.4521.1|Name=mRNA_H-paniculata_contig18412.4521.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=825bp|location=Sequence derived from alignment at H-paniculata_contig18412:4115..4939+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig18412:4115..4939+ >mRNA_H-paniculata_contig18412.4521.1 ID=mRNA_H-paniculata_contig18412.4521.1|Name=mRNA_H-paniculata_contig18412.4521.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1026bp|location=Sequence derived from alignment at H-paniculata_contig18412:4115..4939+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |