prot_H-paniculata_contig1841.4519.1 (polypeptide) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing a polypeptide, more information available on the corresponding mRNA page

Overview
NamemRNA_H-paniculata_contig1841.4519.1
Unique Nameprot_H-paniculata_contig1841.4519.1
Typepolypeptide
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Sequence length105
Homology
BLAST of mRNA_H-paniculata_contig1841.4519.1 vs. uniprot
Match: A0A6H5JV56_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV56_9PHAE)

HSP 1 Score: 84.0 bits (206), Expect = 1.120e-16
Identity = 41/102 (40.20%), Postives = 64/102 (62.75%), Query Frame = 0
Query:    1 MFFFADGLIHFSSRLQKITATGTTEAELIALAKCAKQGIYLLGICRELGL-QLTSCEVRSDNRGALHLAANSNYSSRSKHIAIRFAALKDWIRRHQLIIDHV 101
            M F A  LI+FSSR+Q+I A  ++E E   +   AK G+Y   +  ELG  QL   ++ +D R AL L +N  +S+RS+HI++R+ AL+ W+   ++ +DHV
Sbjct:  750 MVFLAGDLIYFSSRVQRIVAQSSSEGEFFTINSTAKHGVYFSSLMGELGWSQLLKFKLLTDTRSALSLFSNGTFSNRSRHISVRYEALRGWVSSSRIALDHV 851          
BLAST of mRNA_H-paniculata_contig1841.4519.1 vs. uniprot
Match: A0A6H5KC04_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KC04_9PHAE)

HSP 1 Score: 77.4 bits (189), Expect = 9.070e-15
Identity = 38/101 (37.62%), Postives = 64/101 (63.37%), Query Frame = 0
Query:    1 MFFFADGLIHFSSRLQKITATGTTEAELIALAKCAKQGIYLLGICRELGLQ-LTSCEVRSDNRGALHLAANSNYSSRSKHIAIRFAALKDWIRRHQLIIDH 100
            +FF   GLI + ++ Q + A  T EAEL AL+  A++ +Y+     E+G +   S  + SD+ GAL +A+N+ +SSR+KHIA+RF  L++  + H++ + H
Sbjct:  165 LFFLGGGLISYGAKAQTLAAQNTVEAELQALSFSAREAVYISNFMTEIGFKTFRSVPINSDSTGALTVASNAMFSSRTKHIALRFFFLRELTKGHRITLHH 265          
BLAST of mRNA_H-paniculata_contig1841.4519.1 vs. uniprot
Match: A0A6H5JF46_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JF46_9PHAE)

HSP 1 Score: 77.4 bits (189), Expect = 2.200e-14
Identity = 38/101 (37.62%), Postives = 64/101 (63.37%), Query Frame = 0
Query:    1 MFFFADGLIHFSSRLQKITATGTTEAELIALAKCAKQGIYLLGICRELGLQ-LTSCEVRSDNRGALHLAANSNYSSRSKHIAIRFAALKDWIRRHQLIIDH 100
            +FF   GLI + ++ Q + A  T EAEL AL+  A++ +Y+     E+G +   S  + SD+ GAL +A+N+ +SSR+KHIA+RF  L++  + H++ + H
Sbjct:  602 LFFLGGGLISYGAKAQTLAAQNTVEAELQALSFSAREAVYISNFMTEIGFKTFRSVPINSDSTGALTVASNAMFSSRTKHIALRFFFLRELTKGHRITLHH 702          
BLAST of mRNA_H-paniculata_contig1841.4519.1 vs. uniprot
Match: A0A6H5K4S9_9PHAE (CCHC-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K4S9_9PHAE)

HSP 1 Score: 77.4 bits (189), Expect = 2.230e-14
Identity = 38/101 (37.62%), Postives = 64/101 (63.37%), Query Frame = 0
Query:    1 MFFFADGLIHFSSRLQKITATGTTEAELIALAKCAKQGIYLLGICRELGLQ-LTSCEVRSDNRGALHLAANSNYSSRSKHIAIRFAALKDWIRRHQLIIDH 100
            +FF   GLI + ++ Q + A  T EAEL AL+  A++ +Y+     E+G +   S  + SD+ GAL +A+N+ +SSR+KHIA+RF  L++  + H++ + H
Sbjct:  761 LFFLGGGLISYGAKAQTLAAQNTVEAELQALSFSAREAVYISNFMTEIGFKTFRSVPINSDSTGALTVASNAMFSSRTKHIALRFFFLRELTKGHRITLHH 861          
BLAST of mRNA_H-paniculata_contig1841.4519.1 vs. uniprot
Match: A0A6H5JN55_9PHAE (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JN55_9PHAE)

HSP 1 Score: 75.5 bits (184), Expect = 1.050e-13
Identity = 38/101 (37.62%), Postives = 63/101 (62.38%), Query Frame = 0
Query:    1 MFFFADGLIHFSSRLQKITATGTTEAELIALAKCAKQGIYLLGICRELGLQ-LTSCEVRSDNRGALHLAANSNYSSRSKHIAIRFAALKDWIRRHQLIIDH 100
            +F    GLI + ++ Q + A  T EAEL AL+  A++ +Y+     E+G +   S  + SD+ GAL +A+N+ +SSR+KHIA+RF  L +  +RH++ + H
Sbjct:  679 LFSLGGGLISYGAKAQTLAAQNTVEAELQALSFSAREAVYISNFMTEIGFKTFRSVPINSDSTGALTVASNAMFSSRTKHIALRFFFLGELTKRHRITLHH 779          
BLAST of mRNA_H-paniculata_contig1841.4519.1 vs. uniprot
Match: A0A2N9GG47_FAGSY (Uncharacterized protein n=1 Tax=Fagus sylvatica TaxID=28930 RepID=A0A2N9GG47_FAGSY)

HSP 1 Score: 73.9 bits (180), Expect = 3.700e-13
Identity = 37/101 (36.63%), Postives = 63/101 (62.38%), Query Frame = 0
Query:    1 MFFFADGLIHFSSRLQKITATGTTEAELIALAKCAKQGIYLLGICRELGLQLTSCEVRSDNRGALHLAANSNYSSRSKHIAIRFAALKDWIRRHQLIIDHV 101
            +F  + G I + S LQ I A  T EAE +A+AK AK+ ++L G+ +ELGL     ++  D++ A++LA N  Y +R+KHI +RF  +++ I    ++++ V
Sbjct:  906 VFTLSGGPICWKSTLQSIVAMSTIEAEYMAVAKAAKEALWLKGLVKELGLNQGGVQMHCDSQSAIYLAKNQVYHARTKHIDVRFHKIRELIVTGDIVLEKV 1006          
BLAST of mRNA_H-paniculata_contig1841.4519.1 vs. uniprot
Match: A0A699JW68_TANCI (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Tanacetum cinerariifolium TaxID=118510 RepID=A0A699JW68_TANCI)

HSP 1 Score: 70.1 bits (170), Expect = 4.350e-13
Identity = 35/88 (39.77%), Postives = 53/88 (60.23%), Query Frame = 0
Query:    4 FADGLIHFSSRLQKITATGTTEAELIALAKCAKQGIYLLGICRELGLQLTSCEVRSDNRGALHLAANSNYSSRSKHIAIRFAALKDWI 91
            FA G + + S+LQK  A  TTEAE +A  K  K+ ++L    +ELG +     +  DN+ A+HLA NS +  R+KHI +R+  ++D I
Sbjct:   11 FAGGAVSWQSKLQKCVALSTTEAEYVATTKACKELLWLKRFLQELGFKQQRYAILCDNQSAIHLAKNSMFHKRTKHIDVRYHWIRDAI 98          
BLAST of mRNA_H-paniculata_contig1841.4519.1 vs. uniprot
Match: A0A6H5KEQ3_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KEQ3_9PHAE)

HSP 1 Score: 73.2 bits (178), Expect = 6.810e-13
Identity = 36/95 (37.89%), Postives = 61/95 (64.21%), Query Frame = 0
Query:    7 GLIHFSSRLQKITATGTTEAELIALAKCAKQGIYLLGICRELGLQ-LTSCEVRSDNRGALHLAANSNYSSRSKHIAIRFAALKDWIRRHQLIIDH 100
            GLI + ++ Q + A  T EAEL AL+  A++ +Y+     E+G +   S  + SD+ GAL +A+N+ +SSR+KHIA+RF  L++  + H++ + H
Sbjct:  733 GLITYGAKAQTLAAQNTVEAELQALSFSAREAVYISNFMTEIGFKTFRSVPINSDSTGALTVASNAMFSSRTKHIALRFFFLRELTKGHRITLHH 827          
BLAST of mRNA_H-paniculata_contig1841.4519.1 vs. uniprot
Match: A0A0S3T294_PHAAN (Uncharacterized protein n=1 Tax=Vigna angularis var. angularis TaxID=157739 RepID=A0A0S3T294_PHAAN)

HSP 1 Score: 68.9 bits (167), Expect = 7.520e-13
Identity = 35/92 (38.04%), Postives = 57/92 (61.96%), Query Frame = 0
Query:   13 SRLQKITATGTTEAELIALAKCAKQGIYLLGICRELGLQLTSCEVRSDNRGALHLAANSNYSSRSKHIAIRFAALKDWIRRHQLIIDHVLIS 104
            S++QKI A  TTEAE +A+ + +K+ I+L G+  ELG       + SD++ A+HLA NS + SR+KHI +R+  ++  +    L +  +L S
Sbjct:    2 SQIQKIVAISTTEAEYVAVTEASKELIWLQGLLTELGFIQEMTVLHSDSQSAIHLAKNSTFHSRTKHIDLRYHFIRSLLEDEVLTLRKILGS 93          
BLAST of mRNA_H-paniculata_contig1841.4519.1 vs. uniprot
Match: A0A060SQN8_PYCCI (Reverse transcriptase Ty1/copia-type domain-containing protein n=2 Tax=Pycnoporus cinnabarinus TaxID=5643 RepID=A0A060SQN8_PYCCI)

HSP 1 Score: 72.8 bits (177), Expect = 8.930e-13
Identity = 34/92 (36.96%), Postives = 58/92 (63.04%), Query Frame = 0
Query:    5 ADGLIHFSSRLQKITATGTTEAELIALAKCAKQGIYLLGICRELGLQLTSCEVRSDNRGALHLAANSNYSSRSKHIAIRFAALKDWIRRHQL 96
            A G+  + SR+QK  A  +TEAE +A++ C++Q +++  +  E+G QL    +  DN+G L + +N    SRSKHI IR+ A++++I   Q+
Sbjct:  400 AGGVFSWQSRVQKTIAHSSTEAEYMAISDCSRQVVWIRNLLSEIGYQLGPIPIAGDNQGPLFMGSNPVTESRSKHIDIRYHAIREYIENKQI 491          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1841.4519.1 vs. uniprot
Analysis Date: 2022-09-16 (Diamond blastp: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JV56_9PHAE1.120e-1640.20Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KC04_9PHAE9.070e-1537.62Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JF46_9PHAE2.200e-1437.62Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A6H5K4S9_9PHAE2.230e-1437.62CCHC-type domain-containing protein n=1 Tax=Ectoca... [more]
A0A6H5JN55_9PHAE1.050e-1337.62Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2N9GG47_FAGSY3.700e-1336.63Uncharacterized protein n=1 Tax=Fagus sylvatica Ta... [more]
A0A699JW68_TANCI4.350e-1339.77Retrovirus-related Pol polyprotein from transposon... [more]
A0A6H5KEQ3_9PHAE6.810e-1337.89Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A0S3T294_PHAAN7.520e-1338.04Uncharacterized protein n=1 Tax=Vigna angularis va... [more]
A0A060SQN8_PYCCI8.930e-1336.96Reverse transcriptase Ty1/copia-type domain-contai... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig1841contigH-paniculata_contig1841:23547..23861 -
Analyses
This polypeptide is derived from or has results from the following analyses
Analysis NameDate Performed
InterProScan on OGS1.02022-09-29
Diamond blastp: OGS1.0 vs UniRef902022-09-16
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Relationships

This polypeptide derives from the following mRNA feature(s):

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig1841.4519.1mRNA_H-paniculata_contig1841.4519.1Halopteris paniculata Hal_grac_a_UBK monoicousmRNAH-paniculata_contig1841 23547..23879 -


Sequences
The following sequences are available for this feature:

polypeptide sequence

>prot_H-paniculata_contig1841.4519.1 ID=prot_H-paniculata_contig1841.4519.1|Name=mRNA_H-paniculata_contig1841.4519.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=105bp
MFFFADGLIHFSSRLQKITATGTTEAELIALAKCAKQGIYLLGICRELGL
QLTSCEVRSDNRGALHLAANSNYSSRSKHIAIRFAALKDWIRRHQLIIDH
VLIS*
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