mRNA_H-paniculata_contig18402.4513.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig18402.4513.1 vs. uniprot
Match: B1N8E7_9PHAE (Glutathione S-transferase 2 n=1 Tax=Laminaria digitata TaxID=80365 RepID=B1N8E7_9PHAE) HSP 1 Score: 143 bits (361), Expect = 3.870e-41 Identity = 69/102 (67.65%), Postives = 85/102 (83.33%), Query Frame = 1
Query: 1 LYPHDPVEAAFADAAVDSVSDMHLKLLPTIAEKDMTKKLEMRKDLVNDFLPKWLANLEKSLELAGGDYFAGGRLSIGDIAVVARILWMKEGTPSLDGIPSTI 306
LYP D +EAA ADAAVDSV D H+KL PT+ +KD +++EMR++LV DFLP WL NLEK+L AGG YFAGG+LSIGDIAVVAR++W+KEG SLDGIP++I
Sbjct: 80 LYPEDALEAALADAAVDSVGDNHMKLAPTVQQKDKVQQMEMRQNLVRDFLPTWLGNLEKALANAGGTYFAGGKLSIGDIAVVARLVWLKEG--SLDGIPTSI 179
BLAST of mRNA_H-paniculata_contig18402.4513.1 vs. uniprot
Match: B1N8E6_9PHAE (Glutathione S-transferase 1 n=1 Tax=Laminaria digitata TaxID=80365 RepID=B1N8E6_9PHAE) HSP 1 Score: 134 bits (337), Expect = 1.360e-37 Identity = 64/102 (62.75%), Postives = 81/102 (79.41%), Query Frame = 1
Query: 1 LYPHDPVEAAFADAAVDSVSDMHLKLLPTIAEKDMTKKLEMRKDLVNDFLPKWLANLEKSLELAGGDYFAGGRLSIGDIAVVARILWMKEGTPSLDGIPSTI 306
LY DP+EAAFADAA+++V DMH L PT+ E+D KKLEMRK + +++LP WL NLE++L+ AGG YFAGG+LSIGDI VVAR+ W+K G +LDGIP TI
Sbjct: 78 LYSEDPIEAAFADAAMEAVIDMHFHLRPTVHEQDPAKKLEMRKAMTDNYLPTWLGNLERALKAAGGSYFAGGKLSIGDIYVVARLNWLKRG--ALDGIPDTI 177
BLAST of mRNA_H-paniculata_contig18402.4513.1 vs. uniprot
Match: A0A6H5JAZ7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAZ7_9PHAE) HSP 1 Score: 126 bits (316), Expect = 5.120e-35 Identity = 61/102 (59.80%), Postives = 79/102 (77.45%), Query Frame = 1
Query: 1 LYPHDPVEAAFADAAVDSVSDMHLKLLPTIAEKDMTKKLEMRKDLVNDFLPKWLANLEKSLELAGGDYFAGGRLSIGDIAVVARILWMKEGTPSLDGIPSTI 306
LYP+DP++AAFAD+AVD+VSD+H + I EKD K ++RKDLV LP WL N EK+L+LAGG YFAG +LSIGDIAVVAR+ W+ +GT +G+PST+
Sbjct: 27 LYPNDPIQAAFADSAVDAVSDIHGYMRGIIFEKDADAKAQLRKDLVETLLPPWLTNSEKALKLAGGKYFAGDKLSIGDIAVVARLNWLTDGT--FEGVPSTL 126
BLAST of mRNA_H-paniculata_contig18402.4513.1 vs. uniprot
Match: D8LHF0_ECTSI (Glutathione S-transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LHF0_ECTSI) HSP 1 Score: 127 bits (320), Expect = 5.180e-35 Identity = 62/102 (60.78%), Postives = 80/102 (78.43%), Query Frame = 1
Query: 1 LYPHDPVEAAFADAAVDSVSDMHLKLLPTIAEKDMTKKLEMRKDLVNDFLPKWLANLEKSLELAGGDYFAGGRLSIGDIAVVARILWMKEGTPSLDGIPSTI 306
LYP DP++AAFAD+A D+VSD+ + I EKD KK ++RKDLV LP WLANLEK+L+LAGG+YFAG +LSIGDIAVVAR+ W+ +GT +G+PST+
Sbjct: 77 LYPTDPIQAAFADSATDAVSDIQGYMRGIIFEKDADKKAQLRKDLVETLLPTWLANLEKALKLAGGEYFAGDKLSIGDIAVVARLNWLTDGT--FEGVPSTL 176
BLAST of mRNA_H-paniculata_contig18402.4513.1 vs. uniprot
Match: D8LK37_ECTSI (Glutathione S-transferase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LK37_ECTSI) HSP 1 Score: 119 bits (299), Expect = 7.850e-32 Identity = 59/102 (57.84%), Postives = 75/102 (73.53%), Query Frame = 1
Query: 1 LYPHDPVEAAFADAAVDSVSDMHLKLLPTIAEKDMTKKLEMRKDLVNDFLPKWLANLEKSLELAGGDYFAGGRLSIGDIAVVARILWMKEGTPSLDGIPSTI 306
LYP DP++AAFAD+A D+V+DMH + EKD K ++ KDLV LP WLANLEK+L+LAGG YFAG +LSIGDIAVVAR+ W+ +GT + +PS I
Sbjct: 77 LYPTDPIQAAFADSATDAVNDMHGHMRAIFFEKDADAKTQLLKDLVEKLLPPWLANLEKALKLAGGKYFAGDKLSIGDIAVVARLNWLTDGTFD-ESVPSAI 177
BLAST of mRNA_H-paniculata_contig18402.4513.1 vs. uniprot
Match: B1N8E8_9PHAE (Glutathione S-transferase 3 n=1 Tax=Laminaria digitata TaxID=80365 RepID=B1N8E8_9PHAE) HSP 1 Score: 85.9 bits (211), Expect = 1.200e-18 Identity = 42/102 (41.18%), Postives = 66/102 (64.71%), Query Frame = 1
Query: 1 LYPHDPVEAAFADAAVDSVSDMHLKLLPTIAEKDMTKKLEMRKDLVNDFLPKWLANLEKSLELAGGDYFAGGRLSIGDIAVVARILWMKEGTPSLDGIPSTI 306
L+P D +EAA DA +D+ D ++ + P EKD K+LEM DL +++PKWLAN+EK L G YFA ++S+ DI + R+ +++G + +G+P+TI
Sbjct: 78 LHPSDDLEAAKCDAVLDAAVDFYINVRPAYTEKDQAKQLEMFGDLAVNYIPKWLANVEKQLAATEGIYFAE-KMSVADIMITTRLKTLRDG--NYNGVPTTI 176
BLAST of mRNA_H-paniculata_contig18402.4513.1 vs. uniprot
Match: A0A061SAH2_9CHLO (Prostaglandin-H2 D-isomerase n=1 Tax=Tetraselmis sp. GSL018 TaxID=582737 RepID=A0A061SAH2_9CHLO) HSP 1 Score: 84.0 bits (206), Expect = 6.540e-18 Identity = 47/103 (45.63%), Postives = 59/103 (57.28%), Query Frame = 1
Query: 1 LYPHDPVEAAFADAAVDSVSDMHLKLLPTIAEKDMTKKLEMRKDLVNDFLPKWLANLEKSLELAGGD-YFAGGRLSIGDIAVVARILWMKEGTPSLDGIPSTI 306
LYP DPVEA D VD++ DM L + PT+ E+D KK+EMRK L + LPKWL K +E G Y G L+I D+ + I + G LDGIP TI
Sbjct: 76 LYPTDPVEALAVDQIVDALEDMFLHVKPTVQEQDEKKKMEMRKVLAEETLPKWLGYFNKHIEENGSSGYIVGDSLTIADLKLYTLIGLLTSGM--LDGIPKTI 176
BLAST of mRNA_H-paniculata_contig18402.4513.1 vs. uniprot
Match: F2U7D3_SALR5 (Uncharacterized protein n=1 Tax=Salpingoeca rosetta (strain ATCC 50818 / BSB-021) TaxID=946362 RepID=F2U7D3_SALR5) HSP 1 Score: 79.7 bits (195), Expect = 1.790e-15 Identity = 41/102 (40.20%), Postives = 60/102 (58.82%), Query Frame = 1
Query: 1 LYPHDPVEAAFADAAVDSVSDMHLKLLPTIAEKDMTKKLEMRKDLVNDFLPKWLANLEKSLELAGGDYFAGGRLSIGDIAVVARILWMKEGTPSLDGIPSTI 306
LYP D +EAA D + + D++ ++PTI E+DM +KL MR++L D LP+WLA L + + + G R+SI D+ I W+ G +DGIP TI
Sbjct: 103 LYPEDHMEAARVDEVIGLIEDINWLIIPTIKERDMERKLAMRRELATDLLPRWLAVL--NCKFSNGYVLGPDRISIADLTAFTLIGWLTMGV--MDGIPKTI 200
BLAST of mRNA_H-paniculata_contig18402.4513.1 vs. uniprot
Match: A0A2E1RBK4_9DELT (Uncharacterized protein n=2 Tax=Proteobacteria TaxID=1224 RepID=A0A2E1RBK4_9DELT) HSP 1 Score: 66.2 bits (160), Expect = 4.250e-11 Identity = 39/104 (37.50%), Postives = 57/104 (54.81%), Query Frame = 1
Query: 1 LYPHDP-VEAAFADAAVDSVSDMHLKLLPTIAEKDMTKKLEMRKDLVNDFLPKWLANLEKSLELAGGD-YFAGGRLSIGDIAVVARILWMKEGTPSLDGIPSTI 306
LYP D AA D +D +D+ +++ P+I E D + EMRK+L LP+WL LEK LE G +F G +S+ D+AV W+ G +DGI + +
Sbjct: 79 LYPSDDNYAAAKVDEVIDLCTDITIQMRPSIRETDPKLRTEMRKELSETILPRWLGFLEKLLEDNGDTGFFVGSSISVADLAVWRLCAWISGGI--IDGISTNL 180
BLAST of mRNA_H-paniculata_contig18402.4513.1 vs. uniprot
Match: A0A534ZXF1_9DELT (Glutathione S-transferase n=1 Tax=Deltaproteobacteria bacterium TaxID=2026735 RepID=A0A534ZXF1_9DELT) HSP 1 Score: 65.9 bits (159), Expect = 5.870e-11 Identity = 38/102 (37.25%), Postives = 60/102 (58.82%), Query Frame = 1
Query: 1 LYPHDPVEAAFADAAVDSVSDMHLKLLPTIAEKDMTKKLEMRKDLVNDFLPKWLANLEKSLELAGGDYFAGGRLSIGDIAVVARILWMKEGTPSLDGIPSTI 306
LYP DP +AA D A+++V D+ ++ T + + KK + R+ L + + +L L++ LE GG YFAGGRLS+ D+ V I ++ G LD IP+ +
Sbjct: 78 LYPSDPWQAALCDEAMEAVEDITSEVSATFSLPEDQKKAQ-RQALADGPITFFLTRLQQRLEAGGGQYFAGGRLSVADLKVFVWIRHLRSG--KLDYIPADL 176 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig18402.4513.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 19
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig18402.4513.1 >prot_H-paniculata_contig18402.4513.1 ID=prot_H-paniculata_contig18402.4513.1|Name=mRNA_H-paniculata_contig18402.4513.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=102bp LYPHDPVEAAFADAAVDSVSDMHLKLLPTIAEKDMTKKLEMRKDLVNDFLback to top mRNA from alignment at H-paniculata_contig18402:3449..5206+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig18402.4513.1 ID=mRNA_H-paniculata_contig18402.4513.1|Name=mRNA_H-paniculata_contig18402.4513.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1758bp|location=Sequence derived from alignment at H-paniculata_contig18402:3449..5206+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig18402:3449..5206+ >mRNA_H-paniculata_contig18402.4513.1 ID=mRNA_H-paniculata_contig18402.4513.1|Name=mRNA_H-paniculata_contig18402.4513.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=612bp|location=Sequence derived from alignment at H-paniculata_contig18402:3449..5206+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |