mRNA_H-paniculata_contig1839.4505.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig1839.4505.1 vs. uniprot
Match: D8LSH5_ECTSI (Ornithine aminotransferase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LSH5_ECTSI) HSP 1 Score: 118 bits (296), Expect = 1.020e-29 Identity = 59/77 (76.62%), Postives = 64/77 (83.12%), Query Frame = 1
Query: 1 MLTIKPGQHGSTYGGNPMACRVATAALEVLREENLALNSIRMGERLRNGLLLMTAPAVELIRGRGLLNAVVINVSEG 231
MLT+KPGQHGSTYGGNPMACRVATAALEVLREE +A N+ MGERLR GL + AP VELIRGRGLLNAVV+ G
Sbjct: 315 MLTVKPGQHGSTYGGNPMACRVATAALEVLREEGMAENACLMGERLRAGLRSLNAPGVELIRGRGLLNAVVVKDDRG 391
BLAST of mRNA_H-paniculata_contig1839.4505.1 vs. uniprot
Match: A0A835Z9I4_9STRA (Ornithine aminotransferase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z9I4_9STRA) HSP 1 Score: 112 bits (279), Expect = 3.360e-27 Identity = 51/72 (70.83%), Postives = 64/72 (88.89%), Query Frame = 1
Query: 1 MLTIKPGQHGSTYGGNPMACRVATAALEVLREENLALNSIRMGERLRNGLLLMTAPAVELIRGRGLLNAVVI 216
MLTIKPG+HGSTYGGNPMACRVA AAL+VL++EN+A N+ MG+RLR+GL + AP VEL+RG+GLLNA+V+
Sbjct: 338 MLTIKPGEHGSTYGGNPMACRVAMAALQVLKDENMAENATEMGQRLRDGLRAINAPVVELVRGKGLLNAIVV 409
BLAST of mRNA_H-paniculata_contig1839.4505.1 vs. uniprot
Match: UPI000CCC5654 (ornithine aminotransferase, mitochondrial-like n=1 Tax=Myotis lucifugus TaxID=59463 RepID=UPI000CCC5654) HSP 1 Score: 103 bits (256), Expect = 1.580e-26 Identity = 51/79 (64.56%), Postives = 62/79 (78.48%), Query Frame = 1
Query: 1 MLTIKPGQHGSTYGGNPMACRVATAALEVLREENLALNSIRMGERLRNGLLLMTAPAVELIRGRGLLNAVVINVSEGGR 237
MLTIKPG+HGSTYGGNP+ RVA AALEVL EENLA N+ RMG LRN L+ + + V +RG+GLLNA+VI ++GGR
Sbjct: 1 MLTIKPGEHGSTYGGNPLGSRVAIAALEVLEEENLAENADRMGALLRNELMKLPSDIVTAVRGKGLLNAIVIRETKGGR 79
BLAST of mRNA_H-paniculata_contig1839.4505.1 vs. uniprot
Match: A0A7S4M4T0_9STRA (Ornithine aminotransferase n=1 Tax=Odontella aurita TaxID=265563 RepID=A0A7S4M4T0_9STRA) HSP 1 Score: 105 bits (262), Expect = 3.160e-26 Identity = 51/78 (65.38%), Postives = 65/78 (83.33%), Query Frame = 1
Query: 1 MLTIKPGQHGSTYGGNPMACRVATAALEVLREENLALNSIRMGERLRNGLLLMT-APAVELIRGRGLLNAVVINVSEG 231
MLT+KPG+HGSTYGGNP+AC+VATAALEVLR+E L+ NS GE+LR GLL +T + +E +RGRGLLNA+VI+ +G
Sbjct: 101 MLTLKPGEHGSTYGGNPLACKVATAALEVLRDEKLSENSAARGEQLREGLLALTGSTCIETVRGRGLLNAIVIDQPKG 178
BLAST of mRNA_H-paniculata_contig1839.4505.1 vs. uniprot
Match: A0A5B9WUE6_9BACT (Ornithine aminotransferase n=1 Tax=Chitinophaga sp. XS-30 TaxID=2604421 RepID=A0A5B9WUE6_9BACT) HSP 1 Score: 107 bits (267), Expect = 1.000e-25 Identity = 48/73 (65.75%), Postives = 63/73 (86.30%), Query Frame = 1
Query: 1 MLTIKPGQHGSTYGGNPMACRVATAALEVLREENLALNSIRMGERLRNGLLLMTAPAVELIRGRGLLNAVVIN 219
MLTI+PG+HGSTYGGNP+AC+VA AALEVLR+E +A N++ MGERLR G+ + +P + L+RG+GLLNA+VIN
Sbjct: 277 MLTIRPGEHGSTYGGNPLACKVAMAALEVLRDEGMAENAVVMGERLRKGITAIRSPFISLVRGKGLLNAIVIN 349
BLAST of mRNA_H-paniculata_contig1839.4505.1 vs. uniprot
Match: A0A7S2B6N1_9STRA (Ornithine aminotransferase n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2B6N1_9STRA) HSP 1 Score: 102 bits (254), Expect = 1.870e-25 Identity = 48/78 (61.54%), Postives = 63/78 (80.77%), Query Frame = 1
Query: 1 MLTIKPGQHGSTYGGNPMACRVATAALEVLREENLALNSIRMGERLRNGLLLMTAPAVELIRGRGLLNAVVINVSEGG 234
+LTIKPG+HGSTYGGNP+ACRVA AAL VL++EN+A NS+ MGERLR GL + + +RGRGLL+A+V++ +E G
Sbjct: 65 ILTIKPGEHGSTYGGNPLACRVAMAALNVLKDENMAENSLVMGERLRAGLAAIDTDLITTVRGRGLLSAIVVDDTEEG 142
BLAST of mRNA_H-paniculata_contig1839.4505.1 vs. uniprot
Match: A0A1E7FE82_9STRA (Ornithine aminotransferase n=1 Tax=Fragilariopsis cylindrus CCMP1102 TaxID=635003 RepID=A0A1E7FE82_9STRA) HSP 1 Score: 106 bits (264), Expect = 3.410e-25 Identity = 55/79 (69.62%), Postives = 64/79 (81.01%), Query Frame = 1
Query: 1 MLTIKPGQHGSTYGGNPMACRVATAALEVLREENLALNSIRMGERLRNGLL-LMTAPAVELIRGRGLLNAVVINVSEGG 234
MLT+ PG+HGSTYGGNP+AC+VA AALEVLR+ENLA NS GE+LR GL L+ AVE +RGRGLLNAVVIN +GG
Sbjct: 299 MLTLNPGEHGSTYGGNPLACKVAVAALEVLRDENLAENSQARGEQLRKGLSSLVGNSAVETVRGRGLLNAVVINQPKGG 377
BLAST of mRNA_H-paniculata_contig1839.4505.1 vs. uniprot
Match: A0A7S1G0H6_9STRA (Ornithine aminotransferase n=2 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1G0H6_9STRA) HSP 1 Score: 105 bits (261), Expect = 3.420e-25 Identity = 50/80 (62.50%), Postives = 64/80 (80.00%), Query Frame = 1
Query: 1 MLTIKPGQHGSTYGGNPMACRVATAALEVLREENLALNSIRMGERLR---NGLLLMTAPAVELIRGRGLLNAVVINVSEG 231
MLTIKPGQHGSTYGGNP+AC+VATAALEVLR+E L NS+ G +LR NG++ P ++++RGRGLLNA++I+ EG
Sbjct: 211 MLTIKPGQHGSTYGGNPLACKVATAALEVLRDEKLTDNSVARGNQLRDGLNGIIQAGVPGIKVVRGRGLLNAIIIDEPEG 290
BLAST of mRNA_H-paniculata_contig1839.4505.1 vs. uniprot
Match: A0A7S1BXN2_9STRA (Ornithine aminotransferase n=4 Tax=Corethron hystrix TaxID=216773 RepID=A0A7S1BXN2_9STRA) HSP 1 Score: 105 bits (261), Expect = 1.230e-24 Identity = 50/80 (62.50%), Postives = 64/80 (80.00%), Query Frame = 1
Query: 1 MLTIKPGQHGSTYGGNPMACRVATAALEVLREENLALNSIRMGERLR---NGLLLMTAPAVELIRGRGLLNAVVINVSEG 231
MLTIKPGQHGSTYGGNP+AC+VATAALEVLR+E L NS+ G +LR NG++ P ++++RGRGLLNA++I+ EG
Sbjct: 340 MLTIKPGQHGSTYGGNPLACKVATAALEVLRDEKLTDNSVARGNQLRDGLNGIIQAGVPGIKVVRGRGLLNAIIIDEPEG 419
BLAST of mRNA_H-paniculata_contig1839.4505.1 vs. uniprot
Match: A0A4Q6EXS9_9PROT (Ornithine aminotransferase n=2 Tax=Proteobacteria bacterium TaxID=1977087 RepID=A0A4Q6EXS9_9PROT) HSP 1 Score: 104 bits (259), Expect = 1.310e-24 Identity = 50/72 (69.44%), Postives = 60/72 (83.33%), Query Frame = 1
Query: 1 MLTIKPGQHGSTYGGNPMACRVATAALEVLREENLALNSIRMGERLRNGLLLMTAPAVELIRGRGLLNAVVI 216
MLTIKPG+HGSTYGGNP+ACRVAT ALEVLR+E LA NS +MGE LR L + P V+L+RGRGL+NA+V+
Sbjct: 275 MLTIKPGEHGSTYGGNPLACRVATVALEVLRDEKLAENSAKMGELLRAELAKLKQPWVKLVRGRGLMNAIVV 346 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig1839.4505.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig1839.4505.1 >prot_H-paniculata_contig1839.4505.1 ID=prot_H-paniculata_contig1839.4505.1|Name=mRNA_H-paniculata_contig1839.4505.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=87bp MLTIKPGQHGSTYGGNPMACRVATAALEVLREENLALNSIRMGERLRNGLback to top mRNA from alignment at H-paniculata_contig1839:20494..20954- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig1839.4505.1 ID=mRNA_H-paniculata_contig1839.4505.1|Name=mRNA_H-paniculata_contig1839.4505.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=461bp|location=Sequence derived from alignment at H-paniculata_contig1839:20494..20954- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig1839:20494..20954- >mRNA_H-paniculata_contig1839.4505.1 ID=mRNA_H-paniculata_contig1839.4505.1|Name=mRNA_H-paniculata_contig1839.4505.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=522bp|location=Sequence derived from alignment at H-paniculata_contig1839:20494..20954- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |