mRNA_H-paniculata_contig183.4477.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig183.4477.1 vs. uniprot
Match: D7FIZ3_ECTSI (Altered inheritance of mitochondria protein 24, mitochondrial n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FIZ3_ECTSI) HSP 1 Score: 279 bits (713), Expect = 5.120e-88 Identity = 144/256 (56.25%), Postives = 185/256 (72.27%), Query Frame = 2
Query: 311 PRFMSLGEGSEILQVALAPGDSIVAGERSFCYRGLGLKAAEVQNPNERGAIGRALGWT-MKQDKVVKWTNEGTAPTYLGLSSPLPGKVIPVDLRQAGAILTKPQMFLCSVTDNQVTTQNLKLTPEGPFPVYHVDLRKVVGSGMCYIQAGGAAVQKTLGRGEAMMVEMGCVVAFAEKCKIVAEQRTG-FIREPPYSQGFNVKITGPGTVFLQSSHVGRLCQSMAVER-ALVRPAMGDAWKGATLLVVIVAVLLVFFE 1069
PRF+SLGEGSE+LQVAL PGD+I+A E++F YRGLGL+ Q G +GRALGW +K D+VVK+TNEG +PTYLGL++ LPGKVIPV L ++G +L KP +FLCSV +N ++T +KL EG V++RK+ G+GMCYI GGAAVQK LGRGE+M+VE GCV A ++ CKIV E+R G IREPPY QGF VKITGPG+VF+QS+H GRL ++ +R A GD K A L +VI+ V+ +
Sbjct: 18 PRFLSLGEGSEVLQVALCPGDAILANEKAFVYRGLGLQ----QELQPTGPMGRALGWIGVKNDRVVKFTNEGNSPTYLGLTASLPGKVIPVSLAKSGTLLAKPSVFLCSVVENDISTAKIKLQSEGQSSQQSVEMRKIAGAGMCYIHGGGAAVQKALGRGESMVVEFGCVAAVSDACKIVPEERNGPLIREPPYFQGFQVKITGPGSVFIQSTHTGRLSRASRADRVAQGGSGGGDMMKAAVLTLVIMIVVFTVLD 269
BLAST of mRNA_H-paniculata_contig183.4477.1 vs. uniprot
Match: A0A7Y5PVV1_9PLAN (TIGR00266 family protein n=1 Tax=Planctomycetaceae bacterium TaxID=2026779 RepID=A0A7Y5PVV1_9PLAN) HSP 1 Score: 96.3 bits (238), Expect = 5.490e-19 Identity = 63/211 (29.86%), Postives = 106/211 (50.24%), Query Frame = 2
Query: 329 GEGSEILQVALAPGDSIVAGERSFCYRGLGLKAAEVQNPNERGAIGRALGWTMKQDKVVKWTNEGTAPTYLGLSSPLPGKVIPVDLRQAGAILTKPQMFLCSVTDNQVTTQNLKLTPEGPFPVYHVDLRKVVGSGMCYIQAGGAAVQKTLGRGEAMMVEMGCVVAFAEKCKIVAEQRTGFIREPPYSQG-FNVKITGPGTVFLQSSHVGRL 958
G+ + +QV LAP D++ A +F + G++ + R +G + V +TN+G AP + ++P PGKV+P+DL + G +L + +LCS TD Q++ + G F L+++ G G ++ A G+ V++TLG+GE + V+ GC+VA + G +G F + GPG V+LQ+ RL
Sbjct: 11 GDDFQYVQVRLAPRDAVRAEPGAFVWMENGIEMETSTGGGVLSGLKRMIGG--ESFFVTTFTNQGGAPATVAFAAPYPGKVLPIDLSR-GTVLCQRDAYLCSTTDAQISVAFTRRFGAGLFGGEGFMLQRIEGRGTAFLHASGSVVERTLGQGETLRVDTGCIVAMEAGVDYDIQMVRGVKSFLFGGEGLFFAVLRGPGRVWLQTLPFSRL 218
BLAST of mRNA_H-paniculata_contig183.4477.1 vs. uniprot
Match: A0A2K1NT36_9BACT (Uncharacterized protein n=1 Tax=Petrotoga sp. 9PWA.NaAc.5.4 TaxID=1434328 RepID=A0A2K1NT36_9BACT) HSP 1 Score: 96.3 bits (238), Expect = 6.710e-19 Identity = 62/218 (28.44%), Postives = 105/218 (48.17%), Query Frame = 2
Query: 317 FMSLGEGSEILQVALAPGDSIVAGERSFCYRGLGLKAAEVQNPNERGAIGRALGWTMKQDK--VVKWTNEGTAPTYLGLSSPLPGKVIPVDLRQA-GAILTKPQMFLCSVTDNQVTTQNLKLTPEGPFPVYHVDLRKVVGSGMCYIQAGGAAVQKTLGRGEAMMVEMGCVVAFAEKCKIVAEQRTGFIREPPYSQG-FNVKITGPGTVFLQSSHVGRL 958
+ G+ +++++ L PG+ I A + Y G+ N G + R L + + + EG+ ++ +P PGK++P+DL Q G+ + + FLC+ ++ + K G F L+++ G GM +I AGG ++K L GE + V+ GC+V F + K + GF +G F K+TGPGT++LQS RL
Sbjct: 7 YKIFGDDMQLVEIELDPGEGIRAEVGAMMYMEDGI----AMQTNTGGGLFRGLKRAFAGESFFITNFVQEGSGKGHVAFGAPYPGKILPIDLIQFNGSFICQKDSFLCAANGIEIEIEFTKRIGTGLFGGEGFILQRLEGHGMAFIHAGGTVIEKHLEPGETLRVDTGCIVGFQKTVKYDIQFVGGFKNALFGGEGMFLAKLTGPGTIYLQSLPFSRL 220
BLAST of mRNA_H-paniculata_contig183.4477.1 vs. uniprot
Match: A0A4U7JC59_9FIRM (TIGR00266 family protein n=1 Tax=Ruminiclostridium herbifermentans TaxID=2488810 RepID=A0A4U7JC59_9FIRM) HSP 1 Score: 95.9 bits (237), Expect = 9.530e-19 Identity = 66/221 (29.86%), Postives = 108/221 (48.87%), Query Frame = 2
Query: 317 FMSLGEGSEILQVALAPGDSIVAGERSFCYRGLGLKAAEVQNPNERGAI-GRALGWTMKQDKVVKWTNEGTAPTYLGLSSPLPGKVIPVDLRQAG-AILTKPQMFLCSVTDNQVTTQNLKLTPEGPFPVYHVDLRKVVGSGMCYIQAGGAAVQKTLGRGEAMMVEMGCVVAFAEKCKIVAEQRTGFIREPPYSQG-FNVKITGPGTVFLQSSHVGRLCQSM 970
+ +G+ +I+++ L P + + A + Y + +Q + GA+ G T + + + N GT ++ S+P PGK+IP+DL G + L + FLC +V + G F L+K+VG GM +I AGG ++K L G+ + V+ GC+VAF+ + GF +G F K+TGPGTV+LQS + RL +
Sbjct: 7 YKIIGDDMQIVEIELDPSEGVRAEAGAMMYTDQNIV---MQTSTQGGALKGFKRMLTGESFFITTFYNTGTQKEHVAFSAPYPGKIIPIDLASVGGSFLCQKDAFLCCANGVEVEVAFTRKLGAGFFGGEGFILQKLVGDGMAFIHAGGTIIRKDLMPGQTLKVDTGCLVAFSPTVDYDIQFVGGFKNALFGGEGVFLAKMTGPGTVYLQSLPLARLADRL 224
BLAST of mRNA_H-paniculata_contig183.4477.1 vs. uniprot
Match: A0A6P5FUF8_ANACO (Altered inheritance of mitochondria protein 24, mitochondrial n=3 Tax=Ananas comosus TaxID=4615 RepID=A0A6P5FUF8_ANACO) HSP 1 Score: 95.9 bits (237), Expect = 1.510e-18 Identity = 70/237 (29.54%), Postives = 111/237 (46.84%), Query Frame = 2
Query: 317 FMSLGEGSEILQVALAPGDSIVAGERSFCYRGLGLKAAEVQNPNERGAIGRALGWTMKQDKVVKWTNEGTAPTYLGLSSPLPGKVIPVDLRQAGA-ILTKPQMFLCSVTDNQVTT---QNLKLTPEGPFPVYHVDLRKVVGSGMCYIQAGGAAVQKTLGRGEAMMVEMGCVVAFAEKCKIVAEQRTGFIREPPYS--QGFNVKITGPGTVFLQSSHVGRLCQSMAVERALVRPAMGD 1009
F LG S+I+Q+ L + + A + CY ++ P G + + L K + + N G Y+G+++P P +++P+DL G IL +P FLCSV D VT Q + G + LR G G+ ++ GG+ VQK LG GE ++V++ +VA + +R + +TGPG VF+QS RL Q +A RA+ P++ D
Sbjct: 25 FQILGGDSQIVQIMLKSQEKVTAKPGTLCYMSGSIQMDNNYLPENEGGVWQWLFG--KSLTSIVFFNPGPEDGYVGIAAPSPARILPIDLANLGGEILCQPDAFLCSVNDVAVTNTVDQRARNIEVGAEVILKQKLR---GQGLAFLVGGGSVVQKILGVGEVVVVDVASIVAMTTAINFHLKNSNA-VRRAVFGGDNQLTATLTGPGVVFIQSLPFQRLSQRIA--RAVAAPSLRD 253
BLAST of mRNA_H-paniculata_contig183.4477.1 vs. uniprot
Match: A0A521RJ11_9GAMM (TIGR00266 family protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A521RJ11_9GAMM) HSP 1 Score: 94.7 bits (234), Expect = 2.380e-18 Identity = 66/213 (30.99%), Postives = 103/213 (48.36%), Query Frame = 2
Query: 329 GEGSEILQVALAPGDSIVAGERSFCYRGLGLKAAEVQNPNERGAI-GRALGWTMKQDKVVKWTNEGTAPTYLGLSSPLPGKVIPVDLRQ-AGAILTKPQMFLCSVTDNQVTTQNLKLTPEGPFPVYHVDLRKVVGSGMCYIQAGGAAVQKTLGRGEAMMVEMGCVVAFAEKCKIVAEQRTGFIREPPYSQG-FNVKITGPGTVFLQSSHVGRL 958
G+ ++++V L PG+ + A + Y G+ E+Q G G T + + + N G A + ++P PGK++P DL G +L + FLC+ ++ K G F L+K+ G+GM ++ AGG ++K L GE + V+ GC+VAFA + GF +G F K+TGPGTV+LQS RL
Sbjct: 11 GDDLQLVEVELDPGEGVRAEAGTMTYMEQGI---EMQTDTGGGVFQGFKRMLTGESFFITTFMNSGKAKRRVAFAAPYPGKIVPFDLDSFGGQVLCQKDSFLCAARGTEIEIAFTKKIGAGLFGGEGFILQKLSGNGMVFVHAGGTVIRKDLAAGEELRVDTGCLVAFAMTVDYDIQFIGGFKNALFGGEGLFLAKMTGPGTVYLQSLPFSRL 220
BLAST of mRNA_H-paniculata_contig183.4477.1 vs. uniprot
Match: B7KDN9_GLOC7 (Uncharacterized protein n=1 Tax=Gloeothece citriformis (strain PCC 7424) TaxID=65393 RepID=B7KDN9_GLOC7) HSP 1 Score: 92.4 bits (228), Expect = 1.010e-17 Identity = 61/216 (28.24%), Postives = 104/216 (48.15%), Query Frame = 2
Query: 317 FMSLGEGSEILQVALAPGDSIVAGERSFCYRGLGLKAAEVQNPNERGAIGRALGWTMKQDKVVKWTNEGTAPTYLGLSSPLPGKVIPVDLRQ-AGAILTKPQMFLCSVTDNQVTTQNLKLTPEGPFPVYHVDLRKVVGSGMCYIQAGGAAVQKTLGRGEAMMVEMGCVVAFAEKCKIVAEQRTGFIREPPYSQG-FNVKITGPGTVFLQSSHVGRL 958
+ G+ +++++ L G+ + A + Y G++ RAL + + + N GT + ++P PGK+IP+ L Q G + + F+C+ ++ + K G F L+++ G G+ +I AGGA V+K L GE + V+ GCVVAF+ + E GF +G F K+TGPGT++LQS + +L
Sbjct: 7 YQIYGDDLQLVEITLDLGEGVRAEAGAMAYLEQGIEMQTSTGGGFLAGFKRALAG--EGFFITNFANRGTRRAKVAFAAPYPGKIIPLQLGQLGGTFICQKDAFICAAKGIEIDVEFTKRLGTGFFGGEGFILQRLQGDGLAFIHAGGALVEKRLMSGEDIRVDTGCVVAFSPTVRYEIEMVKGFKNVLFGGEGLFLAKLTGPGTIYLQSLPLSKL 220
BLAST of mRNA_H-paniculata_contig183.4477.1 vs. uniprot
Match: A0A2A2YE86_9BACT (TIGR00266 family protein n=2 Tax=Verrucomicrobiae TaxID=203494 RepID=A0A2A2YE86_9BACT) HSP 1 Score: 93.6 bits (231), Expect = 2.020e-17 Identity = 71/226 (31.42%), Postives = 114/226 (50.44%), Query Frame = 2
Query: 317 FMSLGEGSEILQVALAPGDSIVAGERSFCYRGLGL----KAAEVQNPNERGAIGRALG-----WTMKQDKVVKWTNEGTAPTYLGLSSPLPGKVIPVDLRQAGA-ILTKPQMFLCSVTDNQVTTQNLKLTPEGPFPVYHVDLRKVVGSGMCYIQAGGAAVQKTLGRGEAMMVEMGCVVAFAEKCKIVAEQRTGFIREPPYS-QG-FNVKITGPGTVFLQSSHVGRL 958
F LGE +++++ L PG+++VA + Y G+ K + P+ G +G+ + T + + +TN G + +SP PG +IPVDL Q G +L + FLC+ Q+ K G F L+++ G GM +I AGG V+K L +GE ++V+ GC+VAF + E R G ++ + +G F + G GTV+LQS GR+
Sbjct: 80 FTILGESMQMVEIELDPGETVVAEAGAMNYMEDGIAFETKMGDGSQPDS-GFMGKLMAVGKRALTGESLFMTHFTNRGAGKKTVAFASPYPGTIIPVDLSQLGGELLCQRDAFLCAAMGTQIGMAFNKKLGAGLFGGEGFILQRLNGDGMAFIHAGGMVVRKEL-KGEKLLVDTGCLVAFTNQINYSIE-RAGNLKSMVFGGEGLFLATLQGHGTVWLQSLPFGRM 302
BLAST of mRNA_H-paniculata_contig183.4477.1 vs. uniprot
Match: UPI0003FAF81A (TIGR00266 family protein n=1 Tax=Desulfovibrio inopinatus TaxID=102109 RepID=UPI0003FAF81A) HSP 1 Score: 92.0 bits (227), Expect = 2.130e-17 Identity = 64/217 (29.49%), Postives = 102/217 (47.00%), Query Frame = 2
Query: 317 FMSLGEGSEILQVALAPGDSIVAGERSFCYRGLGLKAAEVQNPNERGAI-GRALGWTMKQDKVVKWTNEGTAPTYLGLSSPLPGKVIPVDL-RQAGAILTKPQMFLCSVTDNQVTTQNLKLTPEGPFPVYHVDLRKVVGSGMCYIQAGGAAVQKTLGRGEAMMVEMGCVVAFAEKCKIVAEQRTGFIREPPYSQG-FNVKITGPGTVFLQSSHVGRL 958
+ LG+ +++++ L PG+++ A + Y + +Q G G T + + + N G + + +P PGK+IP+DL R G L + +LCS + K G F L+++ G G+ +I AGG+ V+KTLG GE + V+ GC+ ++ E GF +G F +TGPGTVFLQS RL
Sbjct: 7 YQILGDDMQLVEIELDPGEAVRAETGAMMYM---TRDIAMQTSTGGGLFKGFKRMLTGESFFITTFLNAGNSKAMVAFGAPYPGKIIPLDLARFGGHFLCQKDAYLCSAQGIDIEVAFTKKLGAGLFGGEGFILQRLTGDGLAFIHAGGSIVEKTLGPGEVLRVDTGCLAGLEDRVDYDIEFVGGFKNALFGGEGLFLATLTGPGTVFLQSLPFSRL 220
BLAST of mRNA_H-paniculata_contig183.4477.1 vs. uniprot
Match: A0A316CV55_9BACT (Uncharacterized protein (TIGR00266 family) n=1 Tax=Oceanotoga teriensis TaxID=515440 RepID=A0A316CV55_9BACT) HSP 1 Score: 92.0 bits (227), Expect = 2.170e-17 Identity = 60/218 (27.52%), Postives = 106/218 (48.62%), Query Frame = 2
Query: 317 FMSLGEGSEILQVALAPGDSIVAGERSFCYRGLGLKAAEVQNPNERGAIGRALG--WTMKQDKVVKWTNEGTAPTYLGLSSPLPGKVIPVDLRQA-GAILTKPQMFLCSVTDNQVTTQNLKLTPEGPFPVYHVDLRKVVGSGMCYIQAGGAAVQKTLGRGEAMMVEMGCVVAFAEKCKIVAEQRTGFIREPPYSQG-FNVKITGPGTVFLQSSHVGRL 958
+ +G+ +++++ L PG+ + A + Y ++ + N G + R L +T + + + G+ ++ +P PGK++P++L G + + FLC+ ++ + K G F L+++ G GM +I AGGA V+K L GE + V+ GC+V F+ E GF +G F K++GPGTV+LQS RL
Sbjct: 7 YKIVGDDMQLVEIELDPGEGVRAEAGAMMY----MENDIMMQTNTGGGLFRGLKRMFTGESFFITNFVQNGSGKGHVAFGAPYPGKIVPLNLTDFNGTFICQKDSFLCAANGIEIEIELTKKIGTGLFGGEGFILQRLQGHGMAFIHAGGALVEKQLNAGEILKVDTGCIVGFSNSIHYDIEFIGGFKNALFGGEGMFLAKLSGPGTVYLQSLPFSRL 220 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig183.4477.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig183.4477.1 >prot_H-paniculata_contig183.4477.1 ID=prot_H-paniculata_contig183.4477.1|Name=mRNA_H-paniculata_contig183.4477.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=277bp MAANGNNTEAAAPLVEAAATASPRFMSLGEGSEILQVALAPGDSIVAGERback to top mRNA from alignment at H-paniculata_contig183:16396..20183- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig183.4477.1 ID=mRNA_H-paniculata_contig183.4477.1|Name=mRNA_H-paniculata_contig183.4477.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3788bp|location=Sequence derived from alignment at H-paniculata_contig183:16396..20183- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig183:16396..20183- >mRNA_H-paniculata_contig183.4477.1 ID=mRNA_H-paniculata_contig183.4477.1|Name=mRNA_H-paniculata_contig183.4477.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1662bp|location=Sequence derived from alignment at H-paniculata_contig183:16396..20183- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |