mRNA_H-paniculata_contig18281.4470.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig18281.4470.1 vs. uniprot
Match: A0A5D6YB57_9STRA (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YB57_9STRA) HSP 1 Score: 229 bits (584), Expect = 7.860e-68 Identity = 141/382 (36.91%), Postives = 207/382 (54.19%), Query Frame = 1
Query: 4 ALVKNGTWESEEPGRLPVRRKAIRTKWIFKWKLKKDGSVARYKARLVAQGFS*VESEDFFESNAPVARVSTLRTVFSLNAEHDFELEGMDVDAACLSVPVEEELFVKLPRDIFLSPETYYLCPACVKACMASSRPAETGITI----LTIFFVPLPTHACTSLATKGERDIFVVAYVDDLVIA-GRREKVDEFKHNISRRFRMKDLGSLSHLLGIEVRRDRRNGTISISQGGYIREVLKRCGFDECRGSPTPVDRKLNI---LARDSGRNGNSSE---YRGTVGSLIYASTGTRPDIAYAVHQAARRMEDPCREDFSTCKRIFRHLSSVPDLGITFGGKSNGHGLEGFVNADWVEDVEDRKSTTGYVFKLKGGAIRWCSRKQQ 1116
+L KN TWE LP RKAI +KW+FK K +G + RYKARLVA+GF DF E+ APVA+ +++R + S+ A++ L MDV A L+ +EEE+++K P + ++C P TI I F T C + + IFVV YVDDL++A + + K +S RF M DLG L + LG+EV RD ++G +S+ Q ++ VL + G +C+ TP D L + + ++ ++ + YR VG+++Y GTRPD+A AV ++ DPC + KR+ R+L + P GI F G +G L G+ +ADW D+E R+ST+GYVF L GG I W S+KQ+
Sbjct: 19 SLCKNKTWELVP---LPRGRKAISSKWVFKVKETVEGLIERYKARLVAKGFLQKYGVDFEETFAPVAKFASIRIILSIAAQYKLVLHQMDVKTAFLNGLLEEEIYMKQPNGFVDAKYPDHVCKLKRALYGLKQSPRMWNQTIDEFMRKIGFTKCETDHCVYVKRDDKAMIFVVLYVDDLILACNDTDLLAATKRALSERFEMSDLGELKYCLGMEVERDDKSGDVSMRQTKFLHSVLAKFGMQDCKPVKTPQDPGLKLTKAMCEGGCKHDDTMQGVPYRSAVGAVMYLMVGTRPDLAAAVGVLSQFAADPCPTHWQALKRVLRYLQATPTHGIRFAGSGDGE-LIGYSDADWAGDIETRRSTSGYVFVLNGGCITWRSKKQR 396
BLAST of mRNA_H-paniculata_contig18281.4470.1 vs. uniprot
Match: A0A6S7JEY7_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein (Fragment) n=2 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7JEY7_PARCT) HSP 1 Score: 233 bits (594), Expect = 2.940e-67 Identity = 137/377 (36.34%), Postives = 208/377 (55.17%), Query Frame = 1
Query: 4 ALVKNGTWESEEPGRLPVRRKAIRTKWIFKWKLKKDGSVARYKARLVAQGFS*VESEDFFESNAPVARVSTLRTVFSLNAEHDFELEGMDVDAACLSVPVEEELFVKLPRDIFLSPETYYLCPACVKACMASSRP----AETGITILTIFFVPLPTHACTSLATKGERDIFVVAYVDDLVIAGRRE-KVDEFKHNISRRFRMKDLGSLSHLLGIEVRRDRRNGTISISQGGYIREVLKRCGFDECRGSPTPVD--RKLNILARDSGRNGNSSEYRGTVGSLIYASTGTRPDIAYAVHQAARRMEDPCREDFSTCKRIFRHLSSVPDLGITFGGKSNGHGLEGFVNADWVEDVEDRKSTTGYVFKLKGGAIRWCSRKQ 1113
+L N W E LP RKA+ +KW+F+ K DG+V +KARLVAQGFS +D+ E+ +PVAR ++RTV +L A+H +L MDV A L+ ++EE+++K P + + +C C P + + + FV C + +G + YVDD+++AG+ + K++E K ++ +F+MKD+G + LG++V + + I I Q Y + VL+R G + + + TPV+ KL A DS R + Y+ VG L+Y ST TRPDIAYAV AR P E + KRI R+L+ D+G+ + G G+ +ADW D++DRKST+GYVF++ AI W S+KQ
Sbjct: 155 SLKTNEVWNLVE---LPENRKAVGSKWVFRVKTDADGTVETHKARLVAQGFSQTFGDDYDETFSPVARFESVRTVIALAAQHGLKLHQMDVTTAFLNGDLKEEVYMKQPEGFIDKGKEHLVCRLRRSICGLKQSPRCWNSVLDRKLKNMGFVQTTGDPCIYVKEEGGEIFIIAVYVDDILLAGKNDQKINEVKQALAEQFQMKDMGQRHYFLGVKVIQKPDSKEIWIGQEAYTKSVLERFGMESSKPASTPVNPGTKLKKAADDSQRV-DQVNYQCAVGHLLYLSTKTRPDIAYAVSDVARFSAHPTEEHWIAVKRIMRYLNGTRDMGLLYDGSKTTTSCVGYSDADWAGDLDDRKSTSGYVFQISNAAISWRSKKQ 527
BLAST of mRNA_H-paniculata_contig18281.4470.1 vs. uniprot
Match: A0A7D9KES8_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9KES8_PARCT) HSP 1 Score: 230 bits (587), Expect = 7.970e-66 Identity = 138/385 (35.84%), Postives = 209/385 (54.29%), Query Frame = 1
Query: 4 ALVKNGTWESEEPGRLPVRRKAIRTKWIFKWKLKKDGSVARYKARLVAQGFS*VESEDFFESNAPVARVSTLRTVFSLNAEHDFELEGMDVDAACLSVPVEEELFVKLPRDIFLSPETYYLC------------PACVKACMASSRPAETGITILTIFFVPLPTHACTSLATKGERDIFVVAYVDDLVIAGRRE-KVDEFKHNISRRFRMKDLGSLSHLLGIEVRRDRRNGTISISQGGYIREVLKRCGFDECRGSPTPVD--RKLNILARDSGRNGNSSEYRGTVGSLIYASTGTRPDIAYAVHQAARRMEDPCREDFSTCKRIFRHLSSVPDLGITFGGKSNGHGLEGFVNADWVEDVEDRKSTTGYVFKLKGGAIRWCSRKQ 1113
+L N W E LP RKA+ +KW+F+ K DG+V +KARLVAQGFS +D+ E+ +PVAR ++RTV +L A+H +L MDV A L+ ++EE+++K + + +C P C + + + + FV C + +G + YVDD+++AG+ + K++E K ++ +F+MKD+G L + LG++V + I I Q Y + VL+R G + + + TPV+ KL A DS R + Y+ VG L+Y ST TRPDIAYAV AR DP E + KRI R+L+ D+G+ + G G+ +ADW D++DRKST+GYVF++ AI W S+KQ
Sbjct: 7 SLKTNEVWNLVE---LPENRKAVGSKWVFRVKTDADGTVETHKARLVAQGFSQTFGDDYDETFSPVARFESVRTVIALAAQHGLKLHQMDVTTAFLNGDLKEEVYMKQTEGFIEKGKEHLVCRLRRSIYGLKQSPRCWNSVLDRK--------LKNMGFVQTTGDPCIYVKEEGGEIFIIAVYVDDILLAGKNDQKINEVKQALAEQFQMKDMGQLHYFLGVKVIPKPDSKEIWIGQEAYTKSVLERFGMESSKPASTPVNPGTKLKKAADDSQRV-DQVNYQCAVGHLLYLSTKTRPDIAYAVSDVARFSADPTEEHWIAVKRIMRYLNGTRDMGLLYDGSKTTTSCVGYSDADWAGDLDDRKSTSGYVFQISNAAISWRSKKQ 379
BLAST of mRNA_H-paniculata_contig18281.4470.1 vs. uniprot
Match: A0A7D9HZ03_PARCT (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9HZ03_PARCT) HSP 1 Score: 228 bits (581), Expect = 3.030e-65 Identity = 134/378 (35.45%), Postives = 221/378 (58.47%), Query Frame = 1
Query: 4 ALVKNGTWESEEPGRLPVRRKAIRTKWIFKWKLKKDGSVARYKARLVAQGFS*VESEDFFESNAPVARVSTLRTVFSLNAEHDFELEGMDVDAACLSVPVEEELFVKLPRDIFLSPETYYLCPACVKACMASSRPAETGITIL-----TIFFVPLPTHACTSLATKGERDIFVVA-YVDDLVIAGRR-EKVDEFKHNISRRFRMKDLGSLSHLLGIEVRRDRRNGTISISQGGYIREVLKRCGFDECRGSPTPVDRKLNIL-ARDSGRNGNSSEYRGTVGSLIYASTGTRPDIAYAVHQAARRMEDPCREDFSTCKRIFRHLSSVPDLGITFGGKSNGHGLEGFVNADWVEDVEDRKSTTGYVFKLKGGAIRWCSRKQ 1113
+L ++ WE E LP RKA+ KW+FK K DGS+ R+KARLVAQGFS D+ E+ +PV R ++RTV +L+ + +L MDV AA L+ +E+E+++K P + + + C K+ + + ++L +I F + C + + + +IFVVA +VDD+++AG+ EK+ + K +I+ RF++KD+G L ++LG++V ++ + + I Q Y ++K+ G + C+ TPVD ++ A + N E++ VGSL+Y S+ TRPDI +AV+ A+ +P E ++ KRIFR+L + G+ + +N + GF +ADW D+ DRKST+GY F++ G A+ W S+KQ
Sbjct: 171 SLQEHDVWELTE---LPKDRKAVGCKWVFKVKHNADGSIERHKARLVAQGFSQRFGVDYDETFSPVVRFESIRTVIALSVQRGLKLHQMDVTAAFLNGELEDEVYMKQPEGFEVKGKEHLACKL-NKSLYGLKQSSRCWNSVLDEHLKSIGFTQTESDPCIYVKEE-DGNIFVVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVIQE--DAKVWIGQPTYTASIIKKYGMENCKPVETPVDLSSKLVSAMEDSELFNKEEHQSAVGSLLYLSSATRPDITFAVNNVAKFSANPTNEHWTAVKRIFRYLKGTVNYGLLYSENANPDCV-GFSDADWAGDLNDRKSTSGYTFQINGAAVSWRSKKQ 540
BLAST of mRNA_H-paniculata_contig18281.4470.1 vs. uniprot
Match: A0A6S7HEL0_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 (Fragment) n=4 Tax=Paramuricea clavata TaxID=317549 RepID=A0A6S7HEL0_PARCT) HSP 1 Score: 231 bits (589), Expect = 4.270e-64 Identity = 136/378 (35.98%), Postives = 221/378 (58.47%), Query Frame = 1
Query: 4 ALVKNGTWESEEPGRLPVRRKAIRTKWIFKWKLKKDGSVARYKARLVAQGFS*VESEDFFESNAPVARVSTLRTVFSLNAEHDFELEGMDVDAACLSVPVEEELFVKLPRDIFLSPETYYLCPACVKACMASSRPAETGITIL-----TIFFVPLPTHACTSLATKGERDIFVVA-YVDDLVIAGRR-EKVDEFKHNISRRFRMKDLGSLSHLLGIEVRRDRRNGTISISQGGYIREVLKRCGFDECRGSPTPVDRKLNIL-ARDSGRNGNSSEYRGTVGSLIYASTGTRPDIAYAVHQAARRMEDPCREDFSTCKRIFRHLSSVPDLGITFGGKSNGHGLEGFVNADWVEDVEDRKSTTGYVFKLKGGAIRWCSRKQ 1113
+L ++ WE E LP RKA+ KW+FK K DGS+ R+KARLVAQGFS D+ E+ +PV R +RTV +L+ + +L MDV AA L+ +E+E+++K P + + + +C K+ + + ++L +I F + C + + + DIFVVA +VDD+++AG+ EK+ + K +I+ RF++KD+G L ++LG++V ++ + + I Q Y ++K+ G + C+ TPVD ++ A + N EY+ VGSL+Y S+ TRPDI +AV+ A+ +P E ++ KRIFR+L + G+ + +N + GF +ADW D+ DRKST+GY F++ G A+ W S+KQ
Sbjct: 785 SLQEHDVWELTE---LPKDRKAVGCKWVFKVKHNADGSIERHKARLVAQGFSQRFGVDYDETFSPVVRFEKIRTVIALSVQRGLKLHQMDVTAAFLNGELEDEVYMKQPEGFEVKGKEHLVCKL-NKSLYGLKQSSRCWNSVLDEHLKSIGFTQTESDPCIYVKEE-DGDIFVVAIHVDDIILAGKTDEKIAKVKESIAERFQVKDMGELKYILGLQVIQE--DAKVWIGQPTYTASIIKKYGMENCKPVETPVDLSSKLVSAIEDSELFNKEEYQSAVGSLLYLSSATRPDITFAVNNVAKFSANPTNEHWTAVKRIFRYLKGTVNYGLLYSENANPDCV-GFSDADWAGDLNDRKSTSGYTFQINGAAVSWRSKKQ 1154
BLAST of mRNA_H-paniculata_contig18281.4470.1 vs. uniprot
Match: Q9M5J7_PICGL (Reverse transcriptase n=1 Tax=Picea glauca TaxID=3330 RepID=Q9M5J7_PICGL) HSP 1 Score: 221 bits (563), Expect = 1.260e-63 Identity = 137/389 (35.22%), Postives = 209/389 (53.73%), Query Frame = 1
Query: 4 ALVKNGTWESEEPGRLPVRRKAIRTKWIFKWKLKKDGSVARYKARLVAQGFS*VESEDFFESNAPVARVSTLRTVFSLNAEHDFELEGMDVDAACLSVPVEEELFVKLPRDIFLSPETYYLCPACVKACMASSRPA----ETGITILTIFFVPLPTHACTSLATKGERDIFVVAYVDDLVIAGRR-EKVDEFKHNISRRFRMKDLGSLSHLLGIEVRRDRRNGTISISQGGYIREVLKRCGFDECRGSPTPVDRKLNILARDSGRNGNSSE------YRGTVGSLIYASTGTRPDIAYAVHQAARRMEDPCREDFSTCKRIFRHLSSVPDLGITFGGKSNGHGLE------GFVNADWVEDVEDRKSTTGYVFKLKGGAIRWCSRKQQL 1119
+L KN +W+ E L RRK++ KW+FK K +G V +YKARLV +G+S VE +F E +PVA+++++R + S+ D E+E MDV L +EEE+++K P + +C C P + IL + FV C G I+VV YVDD+++ G + + E K +S +F MKDLG+ + +LG++++RDR N + ++Q Y+ +L+R + P+ +N+ A + E Y VGSL+YA TRPDIA+AV +R M +E ++T KR+FR+L G+ + G+S GL+ GFV+ADWV D++ +ST+GYVF L GGAI W S+ Q L
Sbjct: 96 SLDKNESWDIVE---LLARRKSVGRKWLFKKKFNVEGKVEKYKARLVEKGYSQVEGIEFGEIFSPVAKLTSIRFLLSIVVAFDLEVEQMDVKTTFLHGDLEEEIYMKQPEGFVVKGNKELVCKINKSLCGVKQSPRMWYQKFDTYILRLGFVISRADHCVYSKQVGNHFIYVVLYVDDMLLVGNNMDVIKEVKSQLSSKFDMKDLGAANFILGMDIKRDRANRKLWLNQRKYVETILQRFNIHGSKPVKVPIPIGVNLSADQCPKIQEEEEDMSHVPYASAVGSLMYAMVCTRPDIAHAVGFLSRYMSKLGKEHWTTVKRVFRYLHGTTSYGLCYQGRS---GLDRVVDIHGFVDADWVGDLDHIRSTSGYVFNLFGGAISWMSKIQAL 478
BLAST of mRNA_H-paniculata_contig18281.4470.1 vs. uniprot
Match: A0A445HPU2_GLYSO (Retrovirus-related Pol polyprotein from transposon TNT 1-94 n=1 Tax=Glycine soja TaxID=3848 RepID=A0A445HPU2_GLYSO) HSP 1 Score: 226 bits (575), Expect = 3.060e-62 Identity = 137/377 (36.34%), Postives = 213/377 (56.50%), Query Frame = 1
Query: 4 ALVKNGTWESEEPGRLPVRRKAIRTKWIFKWKLKKDGSVARYKARLVAQGFS*VESEDFFESNAPVARVSTLRTVFSLNAEHDFELEGMDVDAACLSVPVEEELFVKLPRDIFLSPETYYLCPACVKACMASSRPAET----GITILTIFFVPLPTHAC--TSLATKGERDIFVVAYVDDLVIAGR-REKVDEFKHNISRRFRMKDLGSLSHLLGIEVRRDRRNGTISISQGGYIREVLKRCGFDECRGSPTPVDRKLNILARDSGRNGNSSEYRGTVGSLIYASTGTRPDIAYAVHQAARRMEDPCREDFSTCKRIFRHLSSVPDLGITFGGKSNGHGLEGFVNADWVEDVEDRKSTTGYVFKLKGGAIRWCSRKQ 1113
++++N TW+ + LP K + K IF+ K+K DG+V +YKARLV QGF E DFF++ APVAR+ST+R + +L A H+ + MDV A L+ ++EE+++K P + +C P + +L+ FV C + T G + + + YVDD++I G +++VDE K +S +F MKD+G +LGI+++R N ISISQ YI ++L++ F +C TP+D L +L + G + EY +GSL+YA TRPDIAYAV + +R +P + R+F++L D G+T+ G + +EG+ +A W+ ++ED ST+G+VF L GGAI W S+KQ
Sbjct: 563 SIMQNNTWKLVD---LPPGCKPLGCKMIFRRKMKVDGTVDKYKARLVIQGFRQKEGIDFFDTYAPVARISTIRLLLALAAIHNLMIHQMDVKTAFLNGELDEEIYMKQPEGFVMPGNENKVCKLMKSLYGLKQAPKQWHQKFDEVVLSSGFVINQADKCLYSKFDTHG-KGVIICLYVDDMLIFGTDQDQVDETKAFLSSKFDMKDMGEADVILGIKIKRG--NNGISISQSHYIEKILEKFNFKDCSPVSTPIDPNLKLLP-NKGVAVSQLEYSRAIGSLMYAMISTRPDIAYAVAKLSRFTSNPSSHHWQAMNRVFKYLKGTIDYGLTYTGFPSV--IEGYSDASWITNMEDYSSTSGWVFLLGGGAISWASKKQ 930
BLAST of mRNA_H-paniculata_contig18281.4470.1 vs. uniprot
Match: A0A6G0HFF8_LARCR (Copia protein Gag-int-pol protein Copia VLP protein Copia protease n=1 Tax=Larimichthys crocea TaxID=215358 RepID=A0A6G0HFF8_LARCR) HSP 1 Score: 214 bits (545), Expect = 2.690e-61 Identity = 134/377 (35.54%), Postives = 205/377 (54.38%), Query Frame = 1
Query: 4 ALVKNGTWESEEPGRLPVRRKAIRTKWIFKWKLKKDGSVARYKARLVAQGFS*VESEDFFESNAPVARVSTLRTVFSLNAEHDFELEGMDVDAACLSVPVEEELFVKLPRDIFLSPETYYLCPACVKACMASSRPAETGITILT-----IFFVPLPTHACTSLATKGERDIFVVAYVDDLV-IAGRREKVDEFKHNISRRFRMKDLGSLSHLLGIEVRRDRRNGTISISQGGYIREVLKRCGFDECRGSPTPVDRKLNILARDSGRNG-NSSEYRGTVGSLIYASTGTRPDIAYAVHQAARRMEDPCREDFSTCKRIFRHLSSVPDLGITFGGKSNGHGLEGFVNADWVEDVEDRKSTTGYVFKLKGGAIRWCSRKQ 1113
+L++N TW+ E LP RK I ++W+FK K DG V RYK RLVA+G+S D+ E+ +PV R S++RT+ S +++ + MDV A L+ +EEE++++ P D ++ P +L K+ + T I F + C + + E +I V YVDDL+ I E + E K + ++++MKD+G LS++LGI V +D+ N ++ + Q YI VL++ G D+ TP D + + D N N Y+ VGSL+YA+ TRPDIA AV ++ P + KRI R+L +L + + +S L GF +ADW D +DR+STTG +F L GGA+ W S+KQ
Sbjct: 23 SLLENETWDLVE---LPKDRKPIGSRWVFKVKHHSDGEVERYKCRLVAKGYSQNYGVDYDETFSPVVRFSSIRTLLSFAVQNNLHVHQMDVVTAFLNGHLEEEIYMEQP-DGYIKPGQEHLVCKLKKSIYGLKQSPRCWSKTFTESMKDIGFNQSTSDPCVFVRARQELEILAV-YVDDLILITESLESMTELKVALKKKYKMKDMGELSYILGISVIQDKTNNSVYLHQKHYIEAVLQKYGMDKANPVTTPADANVKLQKDDGVSNPVNPGTYQSIVGSLLYAAMATRPDIAQAVSAVSKFNAKPNTAHMTAVKRILRYLKGTINLALKY-QRSESETLLGFSDADWAGDQDDRRSTTGNIFLLGGGAVSWLSKKQ 393
BLAST of mRNA_H-paniculata_contig18281.4470.1 vs. uniprot
Match: A0A284QR55_ARMOS (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Armillaria ostoyae TaxID=47428 RepID=A0A284QR55_ARMOS) HSP 1 Score: 214 bits (544), Expect = 2.820e-61 Identity = 130/377 (34.48%), Postives = 207/377 (54.91%), Query Frame = 1
Query: 7 LVKNGTWESEEPGRLPVRRKAIRTKWIFKWKLKKDGSVARYKARLVAQGFS*VESEDFFESNAPVARVSTLRTVFSLNAEHDFELEGMDVDAACLSVPVEEELFVKLPRDIFLSPETYYLCPACVKACMASSRP--AETGITILTIFFVPLPTHACTSLATKGERDIFVVAYVDDL-VIAGRREKVDEFKHNISRRFRMKDLGSLSHLLGIEVRRDRRNGTISISQGGYIREVLKRCGFDECRGSPTPVD---RKLNILARDS-GRNGNSSEYRGT-VGSLIYASTGTRPDIAYAVHQAARRMEDPCREDFSTCKRIFRHLSSVPDLGITFGGKSNGHGLEGFVNADWVEDVEDRKSTTGYVFKLKGGAIRWCSRKQ 1113
L GTW+ EE LP R + KW ++ K DG + RYKARLVA+GFS + DFFE+ APV R+ T R + ++ + + + GMDV A L+ ++E +++ P + + S R + T L + + L + C + I V +VDD+ ++A E + K + ++ + D+G + ++LG+++ R+ GTI++SQ YI +VL+R G ++C+ P+D R I A DS G N + +Y T VGSL+YA+ G+RPDIA+AV + ++ +++P E + KR+FR+L D GIT+G + L + ++DW ED DR+ST+GYV GGA+ W S+KQ
Sbjct: 8 LTSLGTWQLEE---LPQDRSLVDCKWTYRLKRDGDGKITRYKARLVAKGFSQIPGTDFFETYAPVVRLDTFRLLMAIAVQRNLIIHGMDVVGAYLNGKLDESIYMAQPPEYSDGSGKAAHLKLMLYGLKQSGRVWNEKLNATFLGLGYTRLMSDQCVYIRQMDSGPIIVAVHVDDMTLLAPDDETMSNMKEELKKKLNVMDMGEIQYILGMKIDRNWDKGTITLSQKAYILKVLERMGMNDCKPVKMPMDPNVRLEKIPAGDSRGVNTATRQYYHTGVGSLMYAANGSRPDIAHAVTELSKYVQNPAAEHVTALKRVFRYLKGTLDSGITYGRTMDE--LIPYSDSDWGEDRADRRSTSGYVCTYAGGAVTWSSKKQ 379
BLAST of mRNA_H-paniculata_contig18281.4470.1 vs. uniprot
Match: UPI001C91A683 (hypothetical protein n=1 Tax=Modestobacter lapidis TaxID=1608613 RepID=UPI001C91A683) HSP 1 Score: 209 bits (533), Expect = 3.430e-61 Identity = 124/354 (35.03%), Postives = 193/354 (54.52%), Query Frame = 1
Query: 61 RKAIRTKWIFKWKLKKDGSVARYKARLVAQGFS*VESEDFFESNAPVARVSTLRTVFSLNAEHDFELEGMDVDAACLSVPVEEELFVKLPRDIFLSPETYYLCPACVKACMASSRPA----ETGITILTIFFVPLPTHACTSLATKGERDIFVVAYVDDLVIAGRREK-VDEFKHNISRRFRMKDLGSLSHLLGIEVRRDRRNGTISISQGGYIREVLKRCGFDECRGSPTPVDRKLNILARDSGRNGNSSE------YRGTVGSLIYASTGTRPDIAYAVHQAARRMEDPCREDFSTCKRIFRHLSSVPDLGITFGGKSNGHGLE--GFVNADWVEDVEDRKSTTGYVFKLKG 1083
RKAI KW+FK K +G + +YKARLVA+G++ +E D+ E +PVA+++++RTV S A +D E+E MDV A L +EEE+++K P + +C P + I F C + +GE + + YVDD+++ G K + K ++++F MKDLG+ + +LG+ +RRDR + + Q YI +LK+ +C+ TP+ + + A S +N E Y VGSL+YA TRPDIA AV +R M +P +E + KR+FR+L + + F GK +G+ LE G V+A+W D+++R+ST+GYVF L G
Sbjct: 2 RKAIGCKWVFKKKQDAEGKIGKYKARLVAKGYAQIEGVDYAEIFSPVAKLTSIRTVLSAAAAYDLEIEQMDVKTAFLHGDLEEEIYMKQPEGFVARGKENLVCKLEKSLYGLKQSPRMWYQKFDSYAQQIGFTRSHADHCVYVKREGEMFVILTLYVDDMLLIGNSTKMIRTVKDLLAKQFEMKDLGAANFILGMHIRRDRARRRLWLGQERYIEGILKKFNMTDCKPVGTPMSVGVKLSAEQSPQNEEEKEQMASIPYASAVGSLMYAMVCTRPDIAQAVGVLSRYMSNPGKEHWIAVKRVFRYLRGTSNYALCFEGKGDGNTLEFMGSVDANWEGDLDNRRSTSGYVFNLLG 355 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig18281.4470.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
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The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig18281.4470.1 >prot_H-paniculata_contig18281.4470.1 ID=prot_H-paniculata_contig18281.4470.1|Name=mRNA_H-paniculata_contig18281.4470.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=284bp MDVDAACLSVPVEEELFVKLPRDIFLSPETYYLCPACVKACMASSRPAETback to top mRNA from alignment at H-paniculata_contig18281:21..1226- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig18281.4470.1 ID=mRNA_H-paniculata_contig18281.4470.1|Name=mRNA_H-paniculata_contig18281.4470.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1206bp|location=Sequence derived from alignment at H-paniculata_contig18281:21..1226- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig18281:21..1226- >mRNA_H-paniculata_contig18281.4470.1 ID=mRNA_H-paniculata_contig18281.4470.1|Name=mRNA_H-paniculata_contig18281.4470.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1704bp|location=Sequence derived from alignment at H-paniculata_contig18281:21..1226- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |