mRNA_H-paniculata_contig18271.4463.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig18271.4463.1
Unique NamemRNA_H-paniculata_contig18271.4463.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig18271.4463.1 vs. uniprot
Match: A0A6H5LL14_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LL14_9PHAE)

HSP 1 Score: 196 bits (498), Expect = 5.800e-55
Identity = 102/247 (41.30%), Postives = 151/247 (61.13%), Query Frame = 1 
Query:    7 VGSTMRRTLTAGVARQYRPKLEEVNLSERQYGVAVSGDMELMGLRAKAHHQLRHWLIALDCTNASNSVKRAAILEEVAIRTPGLTPFVAKYYGEKPPNIIFQMDTGERRKISSNTGIHQGNGLRPALFCMPVGPILRKCREQFEAPGVELLAYLDDLV-LAMGELTEENLGANHFLRQELARIGVQINNAKTKAVPPMSH--TPSEREIALAARDISVAEGEGAVVVGTPFGTDAFVQQHAFTVVQE 738
            +G T RR + AG  R+++PKLEE+     Q+GVAV+G +E + + A+  HQ  HW++  DC+NA N+ KR AI+ + A   P L  ++A+ Y E P   I+ MD+GERR I   +G+ QG+G+ P LFC  + PI+ K R +++  GV L AY+DD++ L    +T EN+     L  EL  +G+ +N  K+ A+PP  H  TP+ER + L    + +AE EG  VVG P GTDA+V+  A  V+ E
Sbjct:   83 IGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFTLVPIVLKLRAKYDNLGVRLKAYMDDIISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRL-LGDAGLPIAE-EGITVVGVPIGTDAYVEDIAMKVITE 327
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BLAST of mRNA_H-paniculata_contig18271.4463.1 vs. uniprot
Match: A0A6H5KKQ2_9PHAE (Reverse transcriptase domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKQ2_9PHAE)

HSP 1 Score: 196 bits (497), Expect = 2.920e-54
Identity = 101/246 (41.06%), Postives = 150/246 (60.98%), Query Frame = 1 
Query:    7 VGSTMRRTLTAGVARQYRPKLEEVNLSERQYGVAVSGDMELMGLRAKAHHQLRHWLIALDCTNASNSVKRAAILEEVAIRTPGLTPFVAKYYGEKPPNIIFQMDTGERRKISSNTGIHQGNGLRPALFCMPVGPILRKCREQFEAPGVELLAYLDDLVLAMGELTEENLGANHFLRQELARIGVQINNAKTKAVPPMSH--TPSEREIALAARDISVAEGEGAVVVGTPFGTDAFVQQHAFTVVQE 738
            +G T RR + AG  R+++PKLEE+     Q+GVAV+G +E + + A+  HQ  HW++  DC+NA N+ KR AI+ + +   P L  ++A+ Y E P   I+ MD+GERR I   +G+ QG+G+ P LFC  + PI+ K R +++  GV L AY+DD+ L   ++T EN+     L  EL  +G+ +N  K+ A+PP  H  TP+ER   L    + +AE EG  VVG P GTDA+V+  A  V+ E
Sbjct:  451 IGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAIDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQASKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKDITAENIQVTPDLVDELEAVGIIVNRGKSSALPPPGHDVTPTERR-PLGDAGLPIAE-EGITVVGVPIGTDAYVEDIAMKVITE 694
[Close]
BLAST of mRNA_H-paniculata_contig18271.4463.1 vs. uniprot
Match: A0A6H5KMQ2_9PHAE (Reverse transcriptase domain-containing protein n=16 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KMQ2_9PHAE)

HSP 1 Score: 196 bits (499), Expect = 7.800e-54
Identity = 102/246 (41.46%), Postives = 150/246 (60.98%), Query Frame = 1 
Query:    7 VGSTMRRTLTAGVARQYRPKLEEVNLSERQYGVAVSGDMELMGLRAKAHHQLRHWLIALDCTNASNSVKRAAILEEVAIRTPGLTPFVAKYYGEKPPNIIFQMDTGERRKISSNTGIHQGNGLRPALFCMPVGPILRKCREQFEAPGVELLAYLDDLVLAMGELTEENLGANHFLRQELARIGVQINNAKTKAVPPMSH--TPSEREIALAARDISVAEGEGAVVVGTPFGTDAFVQQHAFTVVQE 738
            +G T RR + AG  R+++PKLEE+     Q+GVAV+G +E + + A+  HQ  HW++  DC+NA N+ KR AI+ + A   P L  ++A+ Y E P   I+ MD+GERR I   +G+ QG+G+ P LFC  + PI+ K R +++  GV L AY+DD+ L    +T EN+     L  EL  +G+ +N  K+ A+PP  H  TP+ER + L    + +AE EG  VVG P GTDA+V+  A  V+ E
Sbjct:  452 IGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYAMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRL-LGDAGLPIAE-EGITVVGVPIGTDAYVEDIAMKVITE 695
[Close]
BLAST of mRNA_H-paniculata_contig18271.4463.1 vs. uniprot
Match: A0A6H5K0V7_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K0V7_9PHAE)

HSP 1 Score: 187 bits (475), Expect = 7.550e-53
Identity = 96/237 (40.51%), Postives = 144/237 (60.76%), Query Frame = 1 
Query:    7 VGSTMRRTLTAGVARQYRPKLEEVNLSERQYGVAVSGDMELMGLRAKAHHQLRHWLIALDCTNASNSVKRAAILEEVAIRTPGLTPFVAKYYGEKPPNIIFQMDTGERRKISSNTGIHQGNGLRPALFCMPVGPILRKCREQFEAPGVELLAYLDDLVLAMGELTEENLGANHFLRQELARIGVQINNAKTKAVPPMSH--TPSEREIALAARDISVAEGEGAVVVGTPFGTDAFVQ 711
            +G T RR + AG  R+++PKLEE+     Q+GVAV+G +E + + A+  HQ  HW++  DC++A N+ KR  I+ + A   P +  ++A+ Y E P   I+ MD+GERR I   +G+ QG+G+ P LFC  + PI+ K R  ++  GV L AY+DD+ L    +T EN+     L  EL  +G+ +N  K+ A+PP  H  TP+ER + L    + +AE EG  VVG P GTDA+V+
Sbjct:   76 IGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSDAFNTGKRTVIMAQAAKSVPDVLGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAMYDHLGVCLKAYMDDISLHFNNITAENIQLIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRL-LGDAGLPIAE-EGITVVGVPIGTDAYVE 310
[Close]
BLAST of mRNA_H-paniculata_contig18271.4463.1 vs. uniprot
Match: A0A6H5KYJ9_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KYJ9_9PHAE)

HSP 1 Score: 189 bits (481), Expect = 2.610e-52
Identity = 99/243 (40.74%), Postives = 146/243 (60.08%), Query Frame = 1 
Query:   16 TMRRTLTAGVARQYRPKLEEVNLSERQYGVAVSGDMELMGLRAKAHHQLRHWLIALDCTNASNSVKRAAILEEVAIRTPGLTPFVAKYYGEKPPNIIFQMDTGERRKISSNTGIHQGNGLRPALFCMPVGPILRKCREQFEAPGVELLAYLDDLVLAMGELTEENLGANHFLRQELARIGVQINNAKTKAVPPMSH--TPSEREIALAARDISVAEGEGAVVVGTPFGTDAFVQQHAFTVVQE 738
            T RR + AG  R+++PKLEE+     Q+G AV G +E + + A+  HQ  HW++  DC+NA N+ KR AI+ + A   P L  ++A+ Y E P   I+ MD+GERR I   +G+ QG+G+ P LFC  + PI+ K R +++  GV L AY+DD+ L    +T EN+     +  EL  +G+ +N  K+ A+PP  H  TP+ER + L    + +AE EG  VVG P GTDA+V+  A  V+ E
Sbjct:    2 TWRRLIAAGTVREWKPKLEEIFREADQFGAAVVGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDVVDELEAVGIIVNRGKSSALPPPGHDVTPAERRL-LGDAGLPIAE-EGITVVGVPIGTDAYVEDIAMKVITE 242
[Close]
BLAST of mRNA_H-paniculata_contig18271.4463.1 vs. uniprot
Match: A0A6H5JI32_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JI32_9PHAE)

HSP 1 Score: 188 bits (477), Expect = 3.860e-51
Identity = 99/246 (40.24%), Postives = 147/246 (59.76%), Query Frame = 1 
Query:    7 VGSTMRRTLTAGVARQYRPKLEEVNLSERQYGVAVSGDMELMGLRAKAHHQLRHWLIALDCTNASNSVKRAAILEEVAIRTPGLTPFVAKYYGEKPPNIIFQMDTGERRKISSNTGIHQGNGLRPALFCMPVGPILRKCREQFEAPGVELLAYLDDLVLAMGELTEENLGANHFLRQELARIGVQINNAKTKAVPPMSH--TPSEREIALAARDISVAEGEGAVVVGTPFGTDAFVQQHAFTVVQE 738
            +G T RR + AG  R+++PKLEE+     Q+GVAV+G +E + + A+  HQ  HW++  DC+NA N+ KR AI+ + A   P L  ++A+ Y E P   I+ MD+GERR I   +G+ QG+G+ P LFC  + PI+ K R +++  GV L AY+DD+ L    +T EN+     L  EL  +G+ +N  K+ A+ P      P+ER + L    + +AE EG  VVG P GTDA+V+  A  V+ E
Sbjct:  473 IGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVCLKAYMDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALHPPGRDVAPAERRL-LGDAGLPIAE-EGITVVGVPIGTDAYVEDIAIKVIAE 716
[Close]
BLAST of mRNA_H-paniculata_contig18271.4463.1 vs. uniprot
Match: A0A6H5KT19_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KT19_9PHAE)

HSP 1 Score: 158 bits (399), Expect = 3.220e-43
Identity = 78/199 (39.20%), Postives = 119/199 (59.80%), Query Frame = 1 
Query:    7 VGSTMRRTLTAGVARQYRPKLEEVNLSERQYGVAVSGDMELMGLRAKAHHQLRHWLIALDCTNASNSVKRAAILEEVAIRTPGLTPFVAKYYGEKPPNIIFQMDTGERRKISSNTGIHQGNGLRPALFCMPVGPILRKCREQFEAPGVELLAYLDDLVLAMGELTEENLGANHFLRQELARIGVQINNAKTKAVPPMSH 603
            +G T RR + AG  R+++PKLEE+     Q+GVAV+G +E + + A+   Q  HW++  DC+N  N+ KR AI+ + A   P L   +A+ Y E P   I+ MD+GERR I   +G+ QG+G+ P LFC  + PI+ K R +++  GV L AY+DD+ L    +T E++     L  EL  +G+ +N  K+ A+PP  H
Sbjct:  129 IGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVTGGVEQVAMDAQLVDQTGHWVVQTDCSNGLNTGKRTAIMAQAAKSVPDLVGCIARCY-ELPAKAIYAMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVSLKAYMDDISLHFKNITAESIQVIPDLVDELEAVGIIVNRGKSSALPPPGH 326
[Close]
BLAST of mRNA_H-paniculata_contig18271.4463.1 vs. uniprot
Match: A0A6H5L4Y4_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4Y4_9PHAE)

HSP 1 Score: 152 bits (384), Expect = 8.090e-42
Identity = 71/169 (42.01%), Postives = 107/169 (63.31%), Query Frame = 1 
Query:    7 VGSTMRRTLTAGVARQYRPKLEEVNLSERQYGVAVSGDMELMGLRAKAHHQLRHWLIALDCTNASNSVKRAAILEEVAIRTPGLTPFVAKYYGEKPPNIIFQMDTGERRKISSNTGIHQGNGLRPALFCMPVGPILRKCREQFEAPGVELLAYLDDLVLAMGELTEENL 513
            +G T RR + AG  R+++PKLEE+     Q+GVAV+G +E + + A+  HQ  HW++  DC+NA N+ KR AI+ + A   P L  ++A+ Y E P   I+ MD+GERR I   +G+ QG+G+ P LFC  + PI+ K R +++  GV L AY+DD+ L    +T EN+
Sbjct:   84 IGMTWRRLIAAGTVREWKPKLEEIFREADQFGVAVAGGVEQVAMDAQLVHQTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVSLKAYMDDISLHFKNITAENI 252
[Close]
BLAST of mRNA_H-paniculata_contig18271.4463.1 vs. uniprot
Match: A0A6H5JLG6_9PHAE (Reverse transcriptase domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLG6_9PHAE)

HSP 1 Score: 152 bits (383), Expect = 2.450e-38
Identity = 80/195 (41.03%), Postives = 116/195 (59.49%), Query Frame = 1 
Query:  160 LRHWLIALDCTNASNSVKRAAILEEVAIRTPGLTPFVAKYYGEKPPNIIFQMDTGERRKISSNTGIHQGNGLRPALFCMPVGPILRKCREQFEAPGVELLAYLDDLVLAMGELTEENLGANHFLRQELARIGVQINNAKTKAVPPMSH--TPSEREIALAARDISVAEGEGAVVVGTPFGTDAFVQQHAFTVVQE 738
            L  W++  DC+NA N+ KR AI+ + A   P L  ++A+ Y E P   I+ MD+GERR I   +G+ QG+G+ P LFC  + PI+ K R +++  GV L AY+DD+ L    +T EN+     L  EL  +G+ +N  K+ A+PP  H  TP+ER + L    + +AE EG  VVG P GTDA+V+  A  V+ E
Sbjct:  142 LGQWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVSKVRAKYDHLGVSLKAYVDDISLHFKNITAENIQVIPDLVDELEAVGIIVNRGKSSALPPPGHDVTPAERRL-LGDAGLPIAE-EGITVVGVPIGTDAYVEDIAMKVITE 334
[Close]
BLAST of mRNA_H-paniculata_contig18271.4463.1 vs. uniprot
Match: A0A6H5KJC0_9PHAE (Reverse transcriptase domain-containing protein (Fragment) n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KJC0_9PHAE)

HSP 1 Score: 148 bits (374), Expect = 3.350e-37
Identity = 79/196 (40.31%), Postives = 115/196 (58.67%), Query Frame = 1 
Query:  157 QLRHWLIALDCTNASNSVKRAAILEEVAIRTPGLTPFVAKYYGEKPPNIIFQMDTGERRKISSNTGIHQGNGLRPALFCMPVGPILRKCREQFEAPGVELLAYLDDLVLAMGELTEENLGANHFLRQELARIGVQINNAKTKAVPPMSH--TPSEREIALAARDISVAEGEGAVVVGTPFGTDAFVQQHAFTVVQE 738
            Q  HW++  DC+NA N+ KR AI+ + A   P L  ++A+ Y E P   I+ MD+GERR I   +G+ QG+G+ P LFC  + PI+ K R +++  GV L AY+DD+ L    +T E +     L  EL  +G+ +N  K+ A+PP  H  TP+ER + L    + +AE EG  VVG P  TDA+V+  A  V+ E
Sbjct:  528 QTGHWVVQTDCSNAFNTGKRTAIMAQAAKSVPDLVGYIARCYDEIPAKAIYTMDSGERRTIECKSGVQQGDGMGPPLFCFILVPIVLKLRAKYDHLGVSLKAYMDDISLHFKNITAEFIQVIPDLVNELEAVGIIVNRGKSSALPPPGHDVTPAERRL-LGDAGLPIAE-EGITVVGVPIETDAYVEDIAMKVITE 721
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig18271.4463.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5LL14_9PHAE5.800e-5541.30Reverse transcriptase domain-containing protein (F... [more]
A0A6H5KKQ2_9PHAE2.920e-5441.06Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KMQ2_9PHAE7.800e-5441.46Reverse transcriptase domain-containing protein n=... [more]
A0A6H5K0V7_9PHAE7.550e-5340.51Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KYJ9_9PHAE2.610e-5240.74Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JI32_9PHAE3.860e-5140.24Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KT19_9PHAE3.220e-4339.20Reverse transcriptase domain-containing protein (F... [more]
A0A6H5L4Y4_9PHAE8.090e-4242.01Reverse transcriptase domain-containing protein n=... [more]
A0A6H5JLG6_9PHAE2.450e-3841.03Reverse transcriptase domain-containing protein n=... [more]
A0A6H5KJC0_9PHAE3.350e-3740.31Reverse transcriptase domain-containing protein (F... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig18271contigH-paniculata_contig18271:2878..3618 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeOpisthokonta
Seed ortholog score69.7
Seed ortholog evalue2.1e-09
Seed eggNOG ortholog400682.PAC_15701845
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Reverse transcriptase (RNA-dependent DNA polymerase)
EggNOG OGs39QPF@33154,KOG1075@1,KOG1075@2759
COG Functional cat.S
Best tax levelOpisthokonta
Best eggNOG OGNA|NA|NA
Exons1
Model size741
Cds size723
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929419.7015712-CDS-H-paniculata_contig18271:2877..36001622929419.7015712-CDS-H-paniculata_contig18271:2877..3600Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18271 2878..3600 -
1691480853.5500562-CDS-H-paniculata_contig18271:2877..36001691480853.5500562-CDS-H-paniculata_contig18271:2877..3600Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig18271 2878..3600 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929419.7167277-UTR-H-paniculata_contig18271:3600..36181622929419.7167277-UTR-H-paniculata_contig18271:3600..3618Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig18271 3601..3618 -
1691480853.5621612-UTR-H-paniculata_contig18271:3600..36181691480853.5621612-UTR-H-paniculata_contig18271:3600..3618Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig18271 3601..3618 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig18271.4463.1prot_H-paniculata_contig18271.4463.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig18271 2878..3600 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig18271.4463.1

>prot_H-paniculata_contig18271.4463.1 ID=prot_H-paniculata_contig18271.4463.1|Name=mRNA_H-paniculata_contig18271.4463.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=241bp
MRRTLTAGVARQYRPKLEEVNLSERQYGVAVSGDMELMGLRAKAHHQLRH
WLIALDCTNASNSVKRAAILEEVAIRTPGLTPFVAKYYGEKPPNIIFQMD
TGERRKISSNTGIHQGNGLRPALFCMPVGPILRKCREQFEAPGVELLAYL
DDLVLAMGELTEENLGANHFLRQELARIGVQINNAKTKAVPPMSHTPSER
EIALAARDISVAEGEGAVVVGTPFGTDAFVQQHAFTVVQEK
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mRNA from alignment at H-paniculata_contig18271:2878..3618-

Legend: UTRCDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig18271.4463.1 ID=mRNA_H-paniculata_contig18271.4463.1|Name=mRNA_H-paniculata_contig18271.4463.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=741bp|location=Sequence derived from alignment at H-paniculata_contig18271:2878..3618- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATCGGCGTGGGATCTACGATGCGGCGTACTTTGACCGCTGGGGTGGCCAG
GCAGTACAGGCCGAAGCTGGAGGAGGTTAACTTGTCGGAGCGGCAATACG
GGGTAGCGGTCTCGGGTGACATGGAGCTCATGGGCCTCCGCGCGAAAGCA
CACCACCAACTGAGGCATTGGTTAATCGCTCTCGACTGTACCAATGCATC
CAACTCCGTCAAGCGGGCGGCGATCTTGGAAGAAGTGGCAATCCGCACCC
CAGGACTGACACCTTTCGTAGCCAAATACTATGGGGAGAAGCCACCAAAC
ATCATCTTCCAGATGGACACAGGTGAACGCAGGAAAATCTCGTCGAACAC
GGGAATCCATCAGGGCAACGGACTGCGACCCGCCCTCTTCTGCATGCCCG
TGGGACCGATCTTGCGCAAGTGCCGAGAACAATTCGAGGCTCCGGGAGTG
GAGCTGTTGGCCTACCTCGATGATCTGGTGCTGGCAATGGGGGAGCTGAC
AGAAGAAAACTTAGGGGCGAACCATTTTCTCAGGCAAGAGTTAGCGCGCA
TAGGAGTGCAGATTAACAACGCTAAGACGAAGGCGGTGCCCCCAATGAGC
CACACCCCCAGCGAAAGGGAGATCGCGCTGGCAGCGAGGGATATCAGCGT
CGCAGAAGGAGAGGGAGCTGTGGTGGTGGGTACCCCGTTTGGGACCGACG
CATTCGTTCAGCAGCACGCCTTCACAGTAGTCCAGGAAAAG
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Coding sequence (CDS) from alignment at H-paniculata_contig18271:2878..3618-

>mRNA_H-paniculata_contig18271.4463.1 ID=mRNA_H-paniculata_contig18271.4463.1|Name=mRNA_H-paniculata_contig18271.4463.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1446bp|location=Sequence derived from alignment at H-paniculata_contig18271:2878..3618- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCGGCGTACTTTGACCGCTGGGGTGGCCAGGCAGTACAGGCCGAAGCT
GGAGGAGGTTAACTTGTCGGAGCGGCAATACGGGGTAGCGGTCTCGGGTG
ACATGGAGCTCATGGGCCTCCGCGCGAAAGCACACCACCAACTGAGGCAT
TGGTTAATCGCTCTCGACTGTACCAATGCATCCAACTCCGTCAAGCGGGC
GGCGATCTTGGAAGAAGTGGCAATCCGCACCCCAGGACTGACACCTTTCG
TAGCCAAATACTATGGGGAGAAGCCACCAAACATCATCTTCCAGATGGAC
ACAGGTGAACGCAGGAAAATCTCGTCGAACACGGGAATCCATCAGGGCAA
CGGACTGCGACCCGCCCTCTTCTGCATGCCCGTGGGACCGATCTTGCGCA
AGTGCCGAGAACAATTCGAGGCTCCGGGAGTGGAGCTGTTGGCCTACCTC
GATGATCTGGTGCTGGCAATGGGGGAGCTGACAGAAGAAAACTTAGGGGC
GAACCATTTTCTCAGGCAAGAGTTAGCGCGCATAGGAGTGCAGATTAACA
ACGCTAAGACGAAGGCGGTGCCCCCAATGAGCCACACCCCCAGCGAAAGG
GAGATCGCGCTGGCAGCGAGGGATATCAGCGTCGCAGAAGGAGAGGGAGC
TGTGGTGGTGGGTACCCCGTTTGGGACCGACGCATTCGTTCAGCAGCACG
CCTTCACAGTAGTCCAGGAAAAGATGCGGCGTACTTTGACCGCTGGGGTG
GCCAGGCAGTACAGGCCGAAGCTGGAGGAGGTTAACTTGTCGGAGCGGCA
ATACGGGGTAGCGGTCTCGGGTGACATGGAGCTCATGGGCCTCCGCGCGA
AAGCACACCACCAACTGAGGCATTGGTTAATCGCTCTCGACTGTACCAAT
GCATCCAACTCCGTCAAGCGGGCGGCGATCTTGGAAGAAGTGGCAATCCG
CACCCCAGGACTGACACCTTTCGTAGCCAAATACTATGGGGAGAAGCCAC
CAAACATCATCTTCCAGATGGACACAGGTGAACGCAGGAAAATCTCGTCG
AACACGGGAATCCATCAGGGCAACGGACTGCGACCCGCCCTCTTCTGCAT
GCCCGTGGGACCGATCTTGCGCAAGTGCCGAGAACAATTCGAGGCTCCGG
GAGTGGAGCTGTTGGCCTACCTCGATGATCTGGTGCTGGCAATGGGGGAG
CTGACAGAAGAAAACTTAGGGGCGAACCATTTTCTCAGGCAAGAGTTAGC
GCGCATAGGAGTGCAGATTAACAACGCTAAGACGAAGGCGGTGCCCCCAA
TGAGCCACACCCCCAGCGAAAGGGAGATCGCGCTGGCAGCGAGGGATATC
AGCGTCGCAGAAGGAGAGGGAGCTGTGGTGGTGGGTACCCCGTTTGGGAC
CGACGCATTCGTTCAGCAGCACGCCTTCACAGTAGTCCAGGAAAAG
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